Genomic map of Synechococcus virus S-ESS1 (KY249644)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY249644
Definition
Synechococcus virus S-ESS1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
60362
Host Name
Synechococcus sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
60.9
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB05744.1 KY249644_p49 hypothetical protein phrog_8188 unknown function unknown function -1 55660 56646
ARB05740.1 KY249644_p46 hypothetical protein singleton unknown function unknown function -1 52011 52295
ARB05713.1 KY249644_p14 peptidase S49 phrog_53 head maturation protease head and packaging 1 15513 17324
ARB05737.1 KY249644_p50 hypothetical protein singleton unknown function unknown function -1 56643 56963
ARB05707.1 KY249644_p29 hypothetical protein phrog_1196 tail assembly chaperone tail 1 29324 29524
ARB05725.1 KY249644_p42 FAD-dependent thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 43407 44357
ARB05741.1 KY249644_p45 hypothetical protein singleton unknown function unknown function -1 51285 51554
ARB05711.1 KY249644_p9 SNF2-related protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9792 10769
ARB05710.1 KY249644_p7 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 8826 9278
ARB05719.1 KY249644_p27 tail assembly structural protein phrog_1180 tail assembly chaperone tail 1 29076 29318
ARB05731.1 KY249644_p3 Cro/Cl family transcriptional regulator singleton unknown function unknown function -1 3383 3634
ARB05732.1 KY249644_p2 DNA primase phrog_9765 DNA primase DNA, RNA and nucleotide metabolism -1 2342 3325
ARB05714.1 KY249644_p17 hypothetical protein phrog_27 tail completion or Neck1 protein connector 1 19308 19925
ARB05718.1 KY249644_p26 hypothetical protein phrog_778 tail assembly protein tail 1 28218 29066
ARB05721.1 KY249644_p33 tail protein singleton unknown function unknown function 1 32160 32864
ARB05697.1 KY249644_p31 tail assembly protein singleton unknown function unknown function 1 30445 31401
ARB05693.1 KY249644_p13 portal protein phrog_21 portal protein head and packaging 1 13825 15516
ARB05712.1 KY249644_p11 terminase large subunit phrog_15 terminase large subunit head and packaging 1 11433 13583
ARB05738.1 KY249644_p48 hypothetical protein phrog_4068 unknown function unknown function -1 53370 53597
ARB05728.1 KY249644_p41 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 42989 43417
ARB05736.1 KY249644_p1 DNA primase phrog_256 DNA helicase DNA, RNA and nucleotide metabolism -1 484 2493
ARB05699.1 KY249644_p5 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 6638 8608
ARB05698.1 KY249644_p4 DUF2815 domain-containing protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5606 6295
ARB05704.1 KY249644_p16 hypothetical protein phrog_4858 unknown function unknown function 1 18914 19306
ARB05743.1 KY249644_p51 hypothetical protein singleton unknown function unknown function -1 56893 57282
ARB05706.1 KY249644_p24 tail length tape measure protein singleton unknown function unknown function 1 26732 27025
ARB05703.1 KY249644_p15 minor capsid protein E phrog_29 major head protein head and packaging 1 17696 18430
ARB05723.1 KY249644_p35 peptidoglycan-binding domain 1 protein phrog_1224 endolysin head and packaging 1 36114 37295
ARB05717.1 KY249644_p23 tail length tape measure protein singleton unknown function unknown function 1 25677 26579
ARB05742.1 KY249644_p52 hypothetical protein phrog_7247 unknown function unknown function -1 57556 59061
ARB05709.1 KY249644_p6 DNA polymerase phrog_7766 DNA polymerase DNA, RNA and nucleotide metabolism 1 8430 8753
ARB05734.1 KY249644_p37 hypothetical protein singleton unknown function unknown function -1 39679 39981
ARB05735.1 KY249644_p36 collagen triple helix repeat family protein phrog_10972 tail fiber protein tail -1 38662 39168
ARB05729.1 KY249644_p39 hypothetical protein phrog_4212 unknown function unknown function -1 40976 41284
ARB05739.1 KY249644_p47 hypothetical protein phrog_318 deoxyribonucleoside 5' monophosphate phosphatase other -1 52485 53030
ARB05720.1 KY249644_p30 tail protein singleton unknown function unknown function 1 29508 30209
ARB05716.1 KY249644_p20 tail length tape measure protein phrog_807 major tail protein with Ig-like domain tail 1 20484 21263
ARB05705.1 KY249644_p22 tail tape measure protein phrog_7 endolysin lysis 1 24578 25963
ARB05708.1 KY249644_p32 tail assembly structural protein singleton unknown function unknown function 1 31490 31858
ARB05724.1 KY249644_p44 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 48150 50000
ARB05733.1 KY249644_p40 DUF3310 domain-containing protein phrog_5839 unknown function unknown function -1 41872 42312
ARB05694.1 KY249644_p19 minor tail protein singleton unknown function unknown function 1 20011 20598
ARB05702.1 KY249644_p12 head-tail joining protein phrog_75 head-tail adaptor Ad1 connector 1 13592 13825
ARB05695.1 KY249644_p21 tape measure protein singleton unknown function unknown function 1 22687 24636
ARB05696.1 KY249644_p25 hypothetical protein phrog_1082 tail assembly protein tail 1 27025 28218
ARB05701.1 KY249644_p10 terminase small subunit singleton unknown function unknown function 1 10559 11464
ARB05726.1 KY249644_p38 DNA methyltransferase phrog_359 DNA methyltransferase other -1 39900 40631
ARB05730.1 KY249644_p28 hypothetical protein singleton unknown function unknown function -1 29132 29383
ARB05722.1 KY249644_p34 hypothetical protein phrog_21978 unknown function unknown function 1 32880 33485
ARB05727.1 KY249644_p43 DUF932 domain-containing protein phrog_1362 unknown function unknown function -1 46013 47131
ARB05700.1 KY249644_p8 DEAD/DEAH box helicase singleton unknown function unknown function 1 9275 9991
ARB05715.1 KY249644_p18 minor tail protein singleton unknown function unknown function 1 19926 20231