| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY249644 |
Definition |
Synechococcus virus S-ESS1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
60362 |
Host Name |
Synechococcus sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
60.9 |
Number of singletons |
18 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARB05744.1 | KY249644_p49 | hypothetical protein | phrog_8188 | unknown function | unknown function | -1 | 55660 | 56646 |
| ARB05740.1 | KY249644_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52011 | 52295 |
| ARB05713.1 | KY249644_p14 | peptidase S49 | phrog_53 | head maturation protease | head and packaging | 1 | 15513 | 17324 |
| ARB05737.1 | KY249644_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56643 | 56963 |
| ARB05707.1 | KY249644_p29 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 29324 | 29524 |
| ARB05725.1 | KY249644_p42 | FAD-dependent thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 43407 | 44357 |
| ARB05741.1 | KY249644_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51285 | 51554 |
| ARB05711.1 | KY249644_p9 | SNF2-related protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9792 | 10769 |
| ARB05710.1 | KY249644_p7 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8826 | 9278 |
| ARB05719.1 | KY249644_p27 | tail assembly structural protein | phrog_1180 | tail assembly chaperone | tail | 1 | 29076 | 29318 |
| ARB05731.1 | KY249644_p3 | Cro/Cl family transcriptional regulator | singleton | unknown function | unknown function | -1 | 3383 | 3634 |
| ARB05732.1 | KY249644_p2 | DNA primase | phrog_9765 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 2342 | 3325 |
| ARB05714.1 | KY249644_p17 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 19308 | 19925 |
| ARB05718.1 | KY249644_p26 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 28218 | 29066 |
| ARB05721.1 | KY249644_p33 | tail protein | singleton | unknown function | unknown function | 1 | 32160 | 32864 |
| ARB05697.1 | KY249644_p31 | tail assembly protein | singleton | unknown function | unknown function | 1 | 30445 | 31401 |
| ARB05693.1 | KY249644_p13 | portal protein | phrog_21 | portal protein | head and packaging | 1 | 13825 | 15516 |
| ARB05712.1 | KY249644_p11 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 11433 | 13583 |
| ARB05738.1 | KY249644_p48 | hypothetical protein | phrog_4068 | unknown function | unknown function | -1 | 53370 | 53597 |
| ARB05728.1 | KY249644_p41 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 42989 | 43417 |
| ARB05736.1 | KY249644_p1 | DNA primase | phrog_256 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 484 | 2493 |
| ARB05699.1 | KY249644_p5 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6638 | 8608 |
| ARB05698.1 | KY249644_p4 | DUF2815 domain-containing protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5606 | 6295 |
| ARB05704.1 | KY249644_p16 | hypothetical protein | phrog_4858 | unknown function | unknown function | 1 | 18914 | 19306 |
| ARB05743.1 | KY249644_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56893 | 57282 |
| ARB05706.1 | KY249644_p24 | tail length tape measure protein | singleton | unknown function | unknown function | 1 | 26732 | 27025 |
| ARB05703.1 | KY249644_p15 | minor capsid protein E | phrog_29 | major head protein | head and packaging | 1 | 17696 | 18430 |
| ARB05723.1 | KY249644_p35 | peptidoglycan-binding domain 1 protein | phrog_1224 | endolysin | head and packaging | 1 | 36114 | 37295 |
| ARB05717.1 | KY249644_p23 | tail length tape measure protein | singleton | unknown function | unknown function | 1 | 25677 | 26579 |
| ARB05742.1 | KY249644_p52 | hypothetical protein | phrog_7247 | unknown function | unknown function | -1 | 57556 | 59061 |
| ARB05709.1 | KY249644_p6 | DNA polymerase | phrog_7766 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 8430 | 8753 |
| ARB05734.1 | KY249644_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39679 | 39981 |
| ARB05735.1 | KY249644_p36 | collagen triple helix repeat family protein | phrog_10972 | tail fiber protein | tail | -1 | 38662 | 39168 |
| ARB05729.1 | KY249644_p39 | hypothetical protein | phrog_4212 | unknown function | unknown function | -1 | 40976 | 41284 |
| ARB05739.1 | KY249644_p47 | hypothetical protein | phrog_318 | deoxyribonucleoside 5' monophosphate phosphatase | other | -1 | 52485 | 53030 |
| ARB05720.1 | KY249644_p30 | tail protein | singleton | unknown function | unknown function | 1 | 29508 | 30209 |
| ARB05716.1 | KY249644_p20 | tail length tape measure protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 20484 | 21263 |
| ARB05705.1 | KY249644_p22 | tail tape measure protein | phrog_7 | endolysin | lysis | 1 | 24578 | 25963 |
| ARB05708.1 | KY249644_p32 | tail assembly structural protein | singleton | unknown function | unknown function | 1 | 31490 | 31858 |
| ARB05724.1 | KY249644_p44 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 48150 | 50000 |
| ARB05733.1 | KY249644_p40 | DUF3310 domain-containing protein | phrog_5839 | unknown function | unknown function | -1 | 41872 | 42312 |
| ARB05694.1 | KY249644_p19 | minor tail protein | singleton | unknown function | unknown function | 1 | 20011 | 20598 |
| ARB05702.1 | KY249644_p12 | head-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | 1 | 13592 | 13825 |
| ARB05695.1 | KY249644_p21 | tape measure protein | singleton | unknown function | unknown function | 1 | 22687 | 24636 |
| ARB05696.1 | KY249644_p25 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 27025 | 28218 |
| ARB05701.1 | KY249644_p10 | terminase small subunit | singleton | unknown function | unknown function | 1 | 10559 | 11464 |
| ARB05726.1 | KY249644_p38 | DNA methyltransferase | phrog_359 | DNA methyltransferase | other | -1 | 39900 | 40631 |
| ARB05730.1 | KY249644_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29132 | 29383 |
| ARB05722.1 | KY249644_p34 | hypothetical protein | phrog_21978 | unknown function | unknown function | 1 | 32880 | 33485 |
| ARB05727.1 | KY249644_p43 | DUF932 domain-containing protein | phrog_1362 | unknown function | unknown function | -1 | 46013 | 47131 |
| ARB05700.1 | KY249644_p8 | DEAD/DEAH box helicase | singleton | unknown function | unknown function | 1 | 9275 | 9991 |
| ARB05715.1 | KY249644_p18 | minor tail protein | singleton | unknown function | unknown function | 1 | 19926 | 20231 |