Genomic map of Corynebacterium phage phi16 (KY250482)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY250482
Definition
Corynebacterium phage phi16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
58200
Host Name
Corynebacterium glutamicum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
101
%GC
52.24
Number of singletons
60
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APQ42507.1 KY250482_p2 terminase small subunit singleton unknown function unknown function 1 1149 1379
APQ42560.1 KY250482_p57 hypothetical protein singleton unknown function unknown function 1 39400 39909
APQ42587.1 KY250482_p84 hypothetical protein singleton unknown function unknown function 1 49188 49409
APQ42538.1 KY250482_p35 metallo-endopeptidase phrog_87 metallo-protease other -1 29759 30133
APQ42562.1 KY250482_p59 hypothetical protein singleton unknown function unknown function 1 40480 40746
APQ42575.1 KY250482_p72 hypothetical protein singleton unknown function unknown function 1 45851 46117
APQ42532.1 KY250482_p29 hypothetical protein phrog_15934 unknown function unknown function -1 25479 26357
APQ42511.1 KY250482_p6 hypothetical protein phrog_20430 unknown function unknown function 1 5580 5978
APQ42516.1 KY250482_p11 hypothetical protein phrog_8079 neck protein connector 1 8093 8392
APQ42508.1 KY250482_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1495 3072
APQ42564.1 KY250482_p61 hypothetical protein singleton unknown function unknown function 1 41114 41509
APQ42535.1 KY250482_p32 hypothetical protein singleton unknown function unknown function -1 27563 27709
APQ42583.1 KY250482_p80 hypothetical protein singleton unknown function unknown function 1 48284 48559
APQ42542.1 KY250482_p39 hypothetical protein singleton unknown function unknown function 1 31402 31551
APQ42594.1 KY250482_p91 hypothetical protein singleton unknown function unknown function 1 51162 51434
APQ42525.1 KY250482_p20 tail fiber protein phrog_18185 tail fiber protein tail 1 19360 20547
APQ42518.1 KY250482_p13 major tail protein singleton unknown function unknown function 1 8789 9484
APQ42582.1 KY250482_p79 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism 1 47806 48291
APQ42597.1 KY250482_p94 oligoribonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 52222 52860
APQ42553.1 KY250482_p50 hypothetical protein singleton unknown function unknown function 1 36725 36907
APQ42565.1 KY250482_p62 glutaredoxin-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 41502 41765
APQ42549.1 KY250482_p46 hypothetical protein singleton unknown function unknown function 1 35095 35295
APQ42598.1 KY250482_p95 hypothetical protein singleton unknown function unknown function 1 53065 53307
APQ42551.1 KY250482_p48 hypothetical protein phrog_204 unknown function unknown function 1 35491 35859
APQ42557.1 KY250482_p54 hypothetical protein singleton unknown function unknown function 1 38056 38187
APQ42600.1 KY250482_p97 hypothetical protein phrog_12885 unknown function unknown function 1 53773 54396
APQ42589.1 KY250482_p86 hypothetical protein phrog_25142 unknown function unknown function 1 49648 50058
APQ42546.1 KY250482_p43 hypothetical protein singleton unknown function unknown function 1 33018 33581
APQ42514.1 KY250482_p9 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7330 7764
APQ42572.1 KY250482_p69 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 44917 45270
APQ42601.1 KY250482_p98 hypothetical protein singleton unknown function unknown function 1 54464 55177
APQ42586.1 KY250482_p83 hypothetical protein singleton unknown function unknown function 1 48971 49195
APQ42580.1 KY250482_p77 hypothetical protein singleton unknown function unknown function 1 47208 47471
APQ42566.1 KY250482_p63 crossover junction endodeoxyribonuclease phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 41765 42238
APQ42593.1 KY250482_p90 hypothetical protein singleton unknown function unknown function 1 50812 51189
APQ42523.1 KY250482_p18 hypothetical protein phrog_16996 unknown function unknown function 1 17623 18507
APQ42512.1 KY250482_p7 major capsid protein phrog_1650 major head protein head and packaging 1 6000 6944
APQ42584.1 KY250482_p81 hypothetical protein singleton unknown function unknown function 1 48550 48798
APQ42573.1 KY250482_p70 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 45257 45685
APQ42571.1 KY250482_p68 chromosome segregation protein singleton unknown function unknown function 1 44217 44930
APQ42533.1 KY250482_p30 hypothetical protein singleton unknown function unknown function -1 26360 27037
APQ42591.1 KY250482_p88 hypothetical protein singleton unknown function unknown function 1 50220 50510
APQ42550.1 KY250482_p47 excisionase phrog_66 excisionase and transcriptional regulator integration and excision 1 35288 35467
APQ42544.1 KY250482_p41 hypothetical protein singleton unknown function unknown function 1 31884 32123
APQ42592.1 KY250482_p89 hypothetical protein singleton unknown function unknown function 1 50507 50815
APQ42558.1 KY250482_p55 hypothetical protein singleton unknown function unknown function 1 38184 38516
APQ42605.1 KY250482_p23 holin phrog_443 holin lysis 1 22347 22589
APQ42521.1 KY250482_p16 tail tape measure protein phrog_8927 tail length tape measure protein tail 1 10387 16842
APQ42588.1 KY250482_p85 hypothetical protein singleton unknown function unknown function 1 49410 49634
APQ42547.1 KY250482_p44 hypothetical protein phrog_20769 unknown function unknown function 1 33954 34889
APQ42519.1 KY250482_p14 hypothetical protein singleton unknown function unknown function 1 9613 9978
APQ42604.1 KY250482_p101 ATPase phrog_4581 terminase small subunit head and packaging 1 57024 58118
APQ42548.1 KY250482_p45 hypothetical protein singleton unknown function unknown function 1 34958 35098
APQ42520.1 KY250482_p15 hypothetical protein phrog_24583 unknown function unknown function 1 10014 10340
APQ42599.1 KY250482_p96 hypothetical protein singleton unknown function unknown function 1 53310 53555
APQ42567.1 KY250482_p64 methyltransferase phrog_954 DNA methyltransferase other 1 42262 42732
APQ42529.1 KY250482_p25 hypothetical protein singleton unknown function unknown function -1 23117 23623
APQ42578.1 KY250482_p75 hypothetical protein singleton unknown function unknown function 1 46701 47033
APQ42543.1 KY250482_p40 hypothetical protein singleton unknown function unknown function 1 31618 31866
APQ42526.1 KY250482_p21 hypothetical protein singleton unknown function unknown function 1 20544 20888
APQ42555.1 KY250482_p52 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37268 37639
APQ42530.1 KY250482_p26 hypothetical protein singleton unknown function unknown function -1 23841 24170
APQ42517.1 KY250482_p12 hypothetical protein phrog_6485 tail terminator connector 1 8392 8805
APQ42596.1 KY250482_p93 hypothetical protein singleton unknown function unknown function 1 51911 52225
APQ42569.1 KY250482_p66 hypothetical protein singleton unknown function unknown function 1 43007 43306
APQ42513.1 KY250482_p8 hypothetical protein phrog_2322 head-tail connector protein connector 1 6944 7306
APQ42606.1 KY250482_p28 hypothetical protein phrog_1 integrase integration and excision -1 24604 25491
APQ42537.1 KY250482_p34 super infection exclusion protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover -1 29203 29745
APQ42568.1 KY250482_p65 hypothetical protein singleton unknown function unknown function 1 42729 43010
APQ42539.1 KY250482_p36 DNA-binding protein singleton unknown function unknown function -1 30143 30700
APQ42576.1 KY250482_p73 hypothetical protein singleton unknown function unknown function 1 46114 46488
APQ42522.1 KY250482_p17 hypothetical protein phrog_106 minor tail protein tail 1 16852 17619
APQ42570.1 KY250482_p67 hypothetical protein phrog_28120 unknown function unknown function 1 43303 44220
APQ42603.1 KY250482_p100 hypothetical protein singleton unknown function unknown function 1 56742 56990
APQ42585.1 KY250482_p82 hypothetical protein singleton unknown function unknown function 1 48795 48974
APQ42528.1 KY250482_p24 hypothetical protein singleton unknown function unknown function 1 22589 23095
APQ42579.1 KY250482_p76 hypothetical protein singleton unknown function unknown function 1 47033 47236
APQ42595.1 KY250482_p92 hypothetical protein singleton unknown function unknown function 1 51709 51930
APQ42545.1 KY250482_p42 parB-like nuclease domain protein singleton unknown function unknown function 1 32107 33042
APQ42515.1 KY250482_p10 hypothetical protein singleton unknown function unknown function 1 7761 8093
APQ42531.1 KY250482_p27 hypothetical protein singleton unknown function unknown function -1 24199 24498
APQ42534.1 KY250482_p31 hypothetical protein singleton unknown function unknown function -1 27099 27386
APQ42602.1 KY250482_p99 hypothetical protein singleton unknown function unknown function 1 56438 56758
APQ42540.1 KY250482_p37 hypothetical protein singleton unknown function unknown function 1 30825 31070
APQ42574.1 KY250482_p71 hypothetical protein singleton unknown function unknown function 1 45682 45864
APQ42536.1 KY250482_p33 integrase phrog_1 integrase integration and excision -1 27843 29084
APQ42561.1 KY250482_p58 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 39910 40470
APQ42524.1 KY250482_p19 hypothetical protein singleton unknown function unknown function 1 18509 19348
APQ42509.1 KY250482_p4 portal protein phrog_113 portal protein head and packaging 1 3082 4407
APQ42552.1 KY250482_p49 hypothetical protein phrog_210 unknown function unknown function 1 35874 36734
APQ42563.1 KY250482_p60 hypothetical protein singleton unknown function unknown function 1 40743 41069
APQ42527.1 KY250482_p22 lysin phrog_3084 endolysin lysis 1 20936 22357
APQ42581.1 KY250482_p78 hypothetical protein singleton unknown function unknown function 1 47468 47695
APQ42559.1 KY250482_p56 transcriptional regulator phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 38533 39390
APQ42577.1 KY250482_p74 hypothetical protein singleton unknown function unknown function 1 46478 46708
APQ42554.1 KY250482_p51 hypothetical protein phrog_1389 unknown function unknown function 1 36894 37271
APQ42556.1 KY250482_p53 hypothetical protein singleton unknown function unknown function 1 37656 38045
APQ42510.1 KY250482_p5 head maturation protease phrog_2976 head maturation protease head and packaging 1 4404 5567
APQ42541.1 KY250482_p38 hypothetical protein singleton unknown function unknown function 1 31103 31348
APQ42506.1 KY250482_p1 hypothetical protein phrog_16945 endonuclease DNA, RNA and nucleotide metabolism 1 204 1076
APQ42590.1 KY250482_p87 hypothetical protein singleton unknown function unknown function 1 50051 50227