| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY250482 |
Definition |
Corynebacterium phage phi16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
58200 |
Host Name |
Corynebacterium glutamicum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
52.24 |
Number of singletons |
60 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APQ42507.1 | KY250482_p2 | terminase small subunit | singleton | unknown function | unknown function | 1 | 1149 | 1379 |
| APQ42560.1 | KY250482_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39400 | 39909 |
| APQ42587.1 | KY250482_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49188 | 49409 |
| APQ42538.1 | KY250482_p35 | metallo-endopeptidase | phrog_87 | metallo-protease | other | -1 | 29759 | 30133 |
| APQ42562.1 | KY250482_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40480 | 40746 |
| APQ42575.1 | KY250482_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45851 | 46117 |
| APQ42532.1 | KY250482_p29 | hypothetical protein | phrog_15934 | unknown function | unknown function | -1 | 25479 | 26357 |
| APQ42511.1 | KY250482_p6 | hypothetical protein | phrog_20430 | unknown function | unknown function | 1 | 5580 | 5978 |
| APQ42516.1 | KY250482_p11 | hypothetical protein | phrog_8079 | neck protein | connector | 1 | 8093 | 8392 |
| APQ42508.1 | KY250482_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1495 | 3072 |
| APQ42564.1 | KY250482_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41114 | 41509 |
| APQ42535.1 | KY250482_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27563 | 27709 |
| APQ42583.1 | KY250482_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48284 | 48559 |
| APQ42542.1 | KY250482_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31402 | 31551 |
| APQ42594.1 | KY250482_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51162 | 51434 |
| APQ42525.1 | KY250482_p20 | tail fiber protein | phrog_18185 | tail fiber protein | tail | 1 | 19360 | 20547 |
| APQ42518.1 | KY250482_p13 | major tail protein | singleton | unknown function | unknown function | 1 | 8789 | 9484 |
| APQ42582.1 | KY250482_p79 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 47806 | 48291 |
| APQ42597.1 | KY250482_p94 | oligoribonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 52222 | 52860 |
| APQ42553.1 | KY250482_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36725 | 36907 |
| APQ42565.1 | KY250482_p62 | glutaredoxin-like protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 41502 | 41765 |
| APQ42549.1 | KY250482_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35095 | 35295 |
| APQ42598.1 | KY250482_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53065 | 53307 |
| APQ42551.1 | KY250482_p48 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 35491 | 35859 |
| APQ42557.1 | KY250482_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38056 | 38187 |
| APQ42600.1 | KY250482_p97 | hypothetical protein | phrog_12885 | unknown function | unknown function | 1 | 53773 | 54396 |
| APQ42589.1 | KY250482_p86 | hypothetical protein | phrog_25142 | unknown function | unknown function | 1 | 49648 | 50058 |
| APQ42546.1 | KY250482_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33018 | 33581 |
| APQ42514.1 | KY250482_p9 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7330 | 7764 |
| APQ42572.1 | KY250482_p69 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 44917 | 45270 |
| APQ42601.1 | KY250482_p98 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54464 | 55177 |
| APQ42586.1 | KY250482_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48971 | 49195 |
| APQ42580.1 | KY250482_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47208 | 47471 |
| APQ42566.1 | KY250482_p63 | crossover junction endodeoxyribonuclease | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 41765 | 42238 |
| APQ42593.1 | KY250482_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50812 | 51189 |
| APQ42523.1 | KY250482_p18 | hypothetical protein | phrog_16996 | unknown function | unknown function | 1 | 17623 | 18507 |
| APQ42512.1 | KY250482_p7 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 6000 | 6944 |
| APQ42584.1 | KY250482_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48550 | 48798 |
| APQ42573.1 | KY250482_p70 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 45257 | 45685 |
| APQ42571.1 | KY250482_p68 | chromosome segregation protein | singleton | unknown function | unknown function | 1 | 44217 | 44930 |
| APQ42533.1 | KY250482_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26360 | 27037 |
| APQ42591.1 | KY250482_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50220 | 50510 |
| APQ42550.1 | KY250482_p47 | excisionase | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35288 | 35467 |
| APQ42544.1 | KY250482_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31884 | 32123 |
| APQ42592.1 | KY250482_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50507 | 50815 |
| APQ42558.1 | KY250482_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38184 | 38516 |
| APQ42605.1 | KY250482_p23 | holin | phrog_443 | holin | lysis | 1 | 22347 | 22589 |
| APQ42521.1 | KY250482_p16 | tail tape measure protein | phrog_8927 | tail length tape measure protein | tail | 1 | 10387 | 16842 |
| APQ42588.1 | KY250482_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49410 | 49634 |
| APQ42547.1 | KY250482_p44 | hypothetical protein | phrog_20769 | unknown function | unknown function | 1 | 33954 | 34889 |
| APQ42519.1 | KY250482_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9613 | 9978 |
| APQ42604.1 | KY250482_p101 | ATPase | phrog_4581 | terminase small subunit | head and packaging | 1 | 57024 | 58118 |
| APQ42548.1 | KY250482_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34958 | 35098 |
| APQ42520.1 | KY250482_p15 | hypothetical protein | phrog_24583 | unknown function | unknown function | 1 | 10014 | 10340 |
| APQ42599.1 | KY250482_p96 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53310 | 53555 |
| APQ42567.1 | KY250482_p64 | methyltransferase | phrog_954 | DNA methyltransferase | other | 1 | 42262 | 42732 |
| APQ42529.1 | KY250482_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23117 | 23623 |
| APQ42578.1 | KY250482_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46701 | 47033 |
| APQ42543.1 | KY250482_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31618 | 31866 |
| APQ42526.1 | KY250482_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20544 | 20888 |
| APQ42555.1 | KY250482_p52 | HNH endonuclease domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37268 | 37639 |
| APQ42530.1 | KY250482_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23841 | 24170 |
| APQ42517.1 | KY250482_p12 | hypothetical protein | phrog_6485 | tail terminator | connector | 1 | 8392 | 8805 |
| APQ42596.1 | KY250482_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51911 | 52225 |
| APQ42569.1 | KY250482_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43007 | 43306 |
| APQ42513.1 | KY250482_p8 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6944 | 7306 |
| APQ42606.1 | KY250482_p28 | hypothetical protein | phrog_1 | integrase | integration and excision | -1 | 24604 | 25491 |
| APQ42537.1 | KY250482_p34 | super infection exclusion protein | phrog_4980 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | -1 | 29203 | 29745 |
| APQ42568.1 | KY250482_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42729 | 43010 |
| APQ42539.1 | KY250482_p36 | DNA-binding protein | singleton | unknown function | unknown function | -1 | 30143 | 30700 |
| APQ42576.1 | KY250482_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46114 | 46488 |
| APQ42522.1 | KY250482_p17 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 16852 | 17619 |
| APQ42570.1 | KY250482_p67 | hypothetical protein | phrog_28120 | unknown function | unknown function | 1 | 43303 | 44220 |
| APQ42603.1 | KY250482_p100 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56742 | 56990 |
| APQ42585.1 | KY250482_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48795 | 48974 |
| APQ42528.1 | KY250482_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22589 | 23095 |
| APQ42579.1 | KY250482_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47033 | 47236 |
| APQ42595.1 | KY250482_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51709 | 51930 |
| APQ42545.1 | KY250482_p42 | parB-like nuclease domain protein | singleton | unknown function | unknown function | 1 | 32107 | 33042 |
| APQ42515.1 | KY250482_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7761 | 8093 |
| APQ42531.1 | KY250482_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24199 | 24498 |
| APQ42534.1 | KY250482_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27099 | 27386 |
| APQ42602.1 | KY250482_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56438 | 56758 |
| APQ42540.1 | KY250482_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30825 | 31070 |
| APQ42574.1 | KY250482_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45682 | 45864 |
| APQ42536.1 | KY250482_p33 | integrase | phrog_1 | integrase | integration and excision | -1 | 27843 | 29084 |
| APQ42561.1 | KY250482_p58 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39910 | 40470 |
| APQ42524.1 | KY250482_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18509 | 19348 |
| APQ42509.1 | KY250482_p4 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 3082 | 4407 |
| APQ42552.1 | KY250482_p49 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 35874 | 36734 |
| APQ42563.1 | KY250482_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40743 | 41069 |
| APQ42527.1 | KY250482_p22 | lysin | phrog_3084 | endolysin | lysis | 1 | 20936 | 22357 |
| APQ42581.1 | KY250482_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47468 | 47695 |
| APQ42559.1 | KY250482_p56 | transcriptional regulator | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 38533 | 39390 |
| APQ42577.1 | KY250482_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46478 | 46708 |
| APQ42554.1 | KY250482_p51 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 36894 | 37271 |
| APQ42556.1 | KY250482_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37656 | 38045 |
| APQ42510.1 | KY250482_p5 | head maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 4404 | 5567 |
| APQ42541.1 | KY250482_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31103 | 31348 |
| APQ42506.1 | KY250482_p1 | hypothetical protein | phrog_16945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 204 | 1076 |
| APQ42590.1 | KY250482_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50051 | 50227 |