Genomic map of Haloarcula hispanica pleomorphic virus 4 (HHPV4) (KY264020)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY264020
Definition
Haloarcula hispanica pleomorphic virus 4, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Trapavirae; Saleviricota; Huolimaviricetes; Haloruvirales; Pleolipoviridae; Betapleolipovirus; unclassified Betapleolipovirus.
DB of origin
NUCCORE
Length
15010
Host Name
Haloarcula hispanica
Host domain
Archaea
Is prophage?
undef
Number of proteins
24
%GC
54.63
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM71121.1 KY264020_p7 hypothetical protein phrog_4933 unknown function unknown function -1 3599 3853
ARM71117.1 KY264020_p3 PhiH1-like repressor phrog_2440 transcriptional regulator transcription regulation 1 1453 1779
ARM71122.1 KY264020_p8 hypothetical protein phrog_24538 unknown function unknown function -1 4089 4418
ARM71135.1 KY264020_p21 hypothetical protein phrog_9008 unknown function unknown function -1 14212 14355
ARM71125.1 KY264020_p11 VP11 protein phrog_2231 unknown function unknown function 1 5493 7334
ARM71132.1 KY264020_p18 hypothetical protein singleton unknown function unknown function -1 11466 11768
ARM71123.1 KY264020_p9 VP9 protein phrog_3232 unknown function unknown function 1 4802 5260
ARM71137.1 KY264020_p23 hypothetical protein phrog_12896 unknown function unknown function -1 14546 14734
ARM71119.1 KY264020_p5 hypothetical protein singleton unknown function unknown function 1 2184 2300
ARM71136.1 KY264020_p22 hypothetical protein phrog_6362 unknown function unknown function -1 14352 14549
ARM71116.1 KY264020_p2 hypothetical protein singleton unknown function unknown function 1 1021 1386
ARM71130.1 KY264020_p16 hypothetical protein phrog_2095 unknown function unknown function 1 10010 10399
ARM71127.1 KY264020_p13 hypothetical protein phrog_3526 unknown function unknown function 1 7890 8684
ARM71126.1 KY264020_p12 hypothetical protein phrog_1938 unknown function unknown function 1 7342 7893
ARM71134.1 KY264020_p20 hypothetical protein phrog_3288 transcriptional regulator transcription regulation -1 12446 14209
ARM71118.1 KY264020_p4 PhiH1-like repressor phrog_2440 transcriptional regulator transcription regulation 1 1797 2090
ARM71138.1 KY264020_p24 hypothetical protein singleton unknown function unknown function -1 14769 15008
ARM71129.1 KY264020_p15 hypothetical protein phrog_16103 unknown function unknown function 1 9846 10013
ARM71131.1 KY264020_p17 hypothetical protein singleton unknown function unknown function 1 10500 11465
ARM71133.1 KY264020_p19 hypothetical protein singleton unknown function unknown function -1 11752 12171
ARM71128.1 KY264020_p14 hypothetical protein phrog_1979 unknown function unknown function 1 8677 9849
ARM71124.1 KY264020_p10 hypothetical protein phrog_8813 unknown function unknown function 1 5266 5496
ARM71120.1 KY264020_p6 hypothetical protein phrog_15103 unknown function unknown function -1 2286 3431
ARM71115.1 KY264020_p1 integrase phrog_1 integrase integration and excision -1 1 1038