| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY268295 |
Definition |
Acinetobacter phage vB_AbaP_AS12, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus; Acinetobacter virus AS12. |
DB of origin |
NUCCORE |
Length |
41402 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
39.31 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APW79794.1 | KY268295_p6 | membrane protein | phrog_9054 | unknown function | unknown function | 1 | 3184 | 3297 |
| APW79805.1 | KY268295_p17 | DNA binding protein | phrog_14634 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8303 | 9040 |
| APW79824.1 | KY268295_p36 | hypothetical protein | phrog_7599 | unknown function | unknown function | 1 | 24617 | 24847 |
| APW79828.1 | KY268295_p40 | internal virion protein B | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 28488 | 31373 |
| APW79808.1 | KY268295_p20 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12559 | 12981 |
| APW79814.1 | KY268295_p26 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 15878 | 16318 |
| APW79793.1 | KY268295_p5 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 2600 | 3196 |
| APW79792.1 | KY268295_p4 | membrane protein | phrog_11839 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 2411 | 2524 |
| APW79800.1 | KY268295_p12 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 5322 | 6122 |
| APW79802.1 | KY268295_p14 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 6439 | 6756 |
| APW79822.1 | KY268295_p34 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 23336 | 24367 |
| APW79809.1 | KY268295_p21 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 12984 | 13874 |
| APW79826.1 | KY268295_p38 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 25513 | 27804 |
| APW79816.1 | KY268295_p28 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 17257 | 17907 |
| APW79823.1 | KY268295_p35 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 24420 | 24605 |
| APW79799.1 | KY268295_p11 | DNA binding protein | phrog_2827 | unknown function | unknown function | 1 | 5108 | 5332 |
| APW79801.1 | KY268295_p13 | hypothetical protein | phrog_17267 | unknown function | unknown function | 1 | 6125 | 6439 |
| APW79827.1 | KY268295_p39 | internal virion protein A | phrog_6056 | internal virion protein | head and packaging | 1 | 27804 | 28475 |
| APW79795.1 | KY268295_p7 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 3456 | 3854 |
| APW79806.1 | KY268295_p18 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 9037 | 9990 |
| APW79796.1 | KY268295_p8 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 3933 | 4412 |
| APW79835.1 | KY268295_p47 | DNA binding protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40494 | 40631 |
| APW79836.1 | KY268295_p48 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 40588 | 40791 |
| APW79804.1 | KY268295_p16 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 7002 | 8300 |
| APW79811.1 | KY268295_p23 | DNA binding protein | phrog_5437 | unknown function | unknown function | 1 | 14047 | 14379 |
| APW79789.1 | KY268295_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 941 | 1099 |
| APW79813.1 | KY268295_p25 | tRNA nucleotidyltransferase | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 15315 | 15881 |
| APW79825.1 | KY268295_p37 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 24944 | 25504 |
| APW79829.1 | KY268295_p41 | internal virion protein C | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 31383 | 34481 |
| APW79837.1 | KY268295_p49 | hypothetical protein | phrog_25578 | unknown function | unknown function | 1 | 40799 | 40981 |
| APW79817.1 | KY268295_p29 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 17916 | 20333 |
| APW79831.1 | KY268295_p43 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 37356 | 37691 |
| APW79812.1 | KY268295_p24 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 14372 | 15325 |
| APW79810.1 | KY268295_p22 | Zn-ribbon domain containing protein | phrog_10210 | unknown function | unknown function | 1 | 13931 | 14050 |
| APW79807.1 | KY268295_p19 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 10238 | 12550 |
| APW79818.1 | KY268295_p30 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 20441 | 20638 |
| APW79830.1 | KY268295_p42 | tail spike protein | phrog_3918 | tail fiber protein | tail | 1 | 34488 | 37193 |
| APW79798.1 | KY268295_p10 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 4862 | 5029 |
| APW79820.1 | KY268295_p32 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 20895 | 22451 |
| APW79815.1 | KY268295_p27 | phosphoestherase with HTH domain | phrog_221 | metallo-phosphoesterase | other | 1 | 16322 | 17257 |
| APW79834.1 | KY268295_p46 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38560 | 40497 |
| APW79803.1 | KY268295_p15 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 6756 | 6989 |
| APW79832.1 | KY268295_p44 | endolysin | phrog_181 | endolysin | lysis | 1 | 37678 | 38235 |
| APW79791.1 | KY268295_p3 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2046 | 2420 |
| APW79833.1 | KY268295_p45 | DNA maturase A | phrog_891 | terminase small subunit | head and packaging | 1 | 38244 | 38558 |
| APW79819.1 | KY268295_p31 | hypothetical protein | phrog_4893 | unknown function | unknown function | 1 | 20635 | 20886 |
| APW79790.1 | KY268295_p2 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 1535 | 2044 |
| APW79821.1 | KY268295_p33 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 22460 | 23320 |
| APW79797.1 | KY268295_p9 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 4414 | 4851 |