| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY290756 |
Definition |
Vibrio phage Vp670, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Colwellvirinae; Kaohsiungvirus; Vibrio virus Vp670. |
DB of origin |
NUCCORE |
Length |
43121 |
Host Name |
Vibrio alginolyticus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
43.4 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU00145.1 | KY290756_p8 | endolysin | phrog_938 | endolysin | lysis | 1 | 8496 | 8885 |
| APU00149.1 | KY290756_p12 | hypothetical protein | phrog_4571 | unknown function | unknown function | 1 | 10782 | 11660 |
| APU00170.1 | KY290756_p33 | PIN domain protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 25816 | 27036 |
| APU00163.1 | KY290756_p26 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 20690 | 23233 |
| APU00182.1 | KY290756_p45 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 34112 | 35263 |
| APU00174.1 | KY290756_p37 | phosphomevalonate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 28865 | 29410 |
| APU00144.1 | KY290756_p7 | hypothetical protein | phrog_21064 | unknown function | unknown function | 1 | 8213 | 8479 |
| APU00155.1 | KY290756_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16345 | 16470 |
| APU00147.1 | KY290756_p10 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 9040 | 9156 |
| APU00152.1 | KY290756_p15 | hypothetical protein | phrog_36438 | unknown function | unknown function | 1 | 12912 | 13109 |
| APU00173.1 | KY290756_p36 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 28537 | 28872 |
| APU00142.1 | KY290756_p5 | large terminase subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 5744 | 7618 |
| APU00151.1 | KY290756_p14 | protein kinase | phrog_18305 | kinase | other | 1 | 11894 | 12826 |
| APU00186.1 | KY290756_p49 | hypothetical protein | phrog_4290 | lysozyme domain-containing protein | lysis | 1 | 39219 | 41336 |
| APU00157.1 | KY290756_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16706 | 16930 |
| APU00158.1 | KY290756_p21 | hypothetical protein | phrog_16218 | unknown function | unknown function | 1 | 16966 | 17430 |
| APU00178.1 | KY290756_p41 | hypothetical protein | phrog_1249 | acetyltransferase | other | 1 | 30888 | 31352 |
| APU00172.1 | KY290756_p35 | calcineurin-like phosphoesterase | phrog_221 | metallo-phosphoesterase | other | 1 | 27457 | 28473 |
| APU00179.1 | KY290756_p42 | hypothetical protein | phrog_9033 | unknown function | unknown function | 1 | 31352 | 31528 |
| APU00150.1 | KY290756_p13 | caskin-2/caskin-1 | singleton | unknown function | unknown function | 1 | 11660 | 11821 |
| APU00138.1 | KY290756_p1 | viron protein | singleton | unknown function | unknown function | 1 | 114 | 2267 |
| APU00159.1 | KY290756_p22 | hypothetical protein | phrog_17960 | unknown function | unknown function | 1 | 17430 | 17549 |
| APU00185.1 | KY290756_p48 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 38612 | 39217 |
| APU00139.1 | KY290756_p2 | fiber protein | singleton | unknown function | unknown function | 1 | 2385 | 5204 |
| APU00168.1 | KY290756_p31 | hypothetical protein | phrog_8057 | unknown function | unknown function | 1 | 25006 | 25281 |
| APU00171.1 | KY290756_p34 | recombination endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 27020 | 27457 |
| APU00166.1 | KY290756_p29 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 24033 | 24809 |
| APU00180.1 | KY290756_p43 | head to tail connecting protein | phrog_449 | head-tail adaptor | connector | 1 | 31537 | 33165 |
| APU00161.1 | KY290756_p24 | hypothetical protein | phrog_15101 | unknown function | unknown function | 1 | 19713 | 20177 |
| APU00154.1 | KY290756_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15961 | 16191 |
| APU00177.1 | KY290756_p40 | hypothetical protein | phrog_20076 | unknown function | unknown function | 1 | 30619 | 30891 |
| APU00183.1 | KY290756_p46 | tail protein | phrog_446 | tail protein | tail | 1 | 35331 | 35978 |
| APU00164.1 | KY290756_p27 | hypothetical protein | phrog_31658 | unknown function | unknown function | 1 | 23400 | 23684 |
| APU00165.1 | KY290756_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23722 | 23856 |
| APU00176.1 | KY290756_p39 | hypothetical protein | phrog_14692 | unknown function | unknown function | 1 | 30456 | 30629 |
| APU00156.1 | KY290756_p19 | hypothetical protein | phrog_20635 | unknown function | unknown function | 1 | 16525 | 16674 |
| APU00162.1 | KY290756_p25 | hypothetical protein | phrog_20865 | unknown function | unknown function | 1 | 20246 | 20680 |
| APU00141.1 | KY290756_p4 | small terminase subunit | phrog_891 | terminase small subunit | head and packaging | 1 | 5400 | 5744 |
| APU00140.1 | KY290756_p3 | holin | phrog_920 | holin | lysis | 1 | 5213 | 5398 |
| APU00146.1 | KY290756_p9 | hypothetical protein | phrog_20492 | unknown function | unknown function | 1 | 8882 | 9043 |
| APU00153.1 | KY290756_p16 | DNA-dependent RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13113 | 15899 |
| APU00167.1 | KY290756_p30 | hypothetical protein | phrog_6006 | unknown function | unknown function | 1 | 24811 | 25005 |
| APU00175.1 | KY290756_p38 | adenylation DNA ligase-like protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 29410 | 30420 |
| APU00148.1 | KY290756_p11 | hypothetical protein | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 10302 | 10709 |
| APU00181.1 | KY290756_p44 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 33165 | 34064 |
| APU00143.1 | KY290756_p6 | hypothetical protein | phrog_2725 | acetyl-CoA acetyltransferase | other | 1 | 7813 | 8088 |
| APU00160.1 | KY290756_p23 | hydrolase/topoisomerase-primase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 17580 | 19676 |
| APU00169.1 | KY290756_p32 | hypothetical protein | phrog_4429 | unknown function | unknown function | 1 | 25384 | 25740 |
| APU00184.1 | KY290756_p47 | tail protein | phrog_457 | tail protein | tail | 1 | 35981 | 38602 |