Genomic map of Escherichia phage vB_EcoP_F (KY295894)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY295894
Definition
Escherichia phage vB_EcoP_F, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus F.
DB of origin
NUCCORE
Length
39300
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
49.95
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQT25406.1 KY295894_p12 hypothetical protein phrog_2385 unknown function unknown function 1 9264 9461
AQT25409.1 KY295894_p15 hypothetical protein phrog_8082 unknown function unknown function 1 12519 12719
AQT25425.1 KY295894_p31 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 22210 22500
AQT25401.1 KY295894_p7 hypothetical protein phrog_2193 unknown function unknown function 1 7036 7194
AQT25419.1 KY295894_p25 N-acetyl-anhydromuranmyl-L-alanine amidase phrog_822 amidase lysis 1 16857 17318
AQT25437.1 KY295894_p43 tail tubular A protein phrog_446 tail protein tail 1 29417 29983
AQT25428.1 KY295894_p34 DNA polymerase I phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 23142 24011
AQT25427.1 KY295894_p33 hypothetical protein phrog_4382 unknown function unknown function 1 22703 23152
AQT25408.1 KY295894_p14 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 9819 12500
AQT25399.1 KY295894_p5 lysis protein phrog_1327 Rz-like spanin lysis 1 4530 4979
AQT25414.1 KY295894_p20 hypothetical protein phrog_4943 unknown function unknown function 1 14758 15201
AQT25397.1 KY295894_p3 holin family 6 phrog_920 holin lysis 1 3974 4168
AQT25434.1 KY295894_p40 head to tail connecting protein phrog_449 head-tail adaptor connector 1 25395 26963
AQT25411.1 KY295894_p17 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 13073 13336
AQT25415.1 KY295894_p21 inhibitor of host bacterial RNA polymerase phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 15280 15438
AQT25412.1 KY295894_p18 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 13336 14388
AQT25440.1 KY295894_p46 internal virion protein A phrog_308 internal virion protein head and packaging 1 32654 33124
AQT25442.1 KY295894_p48 internal virion protein C phrog_1339 internal virion protein head and packaging 1 33708 35990
AQT25436.1 KY295894_p42 hypothetical protein phrog_267 major head protein head and packaging 1 28083 29126
AQT25407.1 KY295894_p13 hypothetical protein phrog_7066 unknown function unknown function 1 9461 9721
AQT25416.1 KY295894_p22 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 15496 16194
AQT25418.1 KY295894_p24 hypothetical protein phrog_15211 unknown function unknown function 1 16646 16870
AQT25438.1 KY295894_p44 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 29983 30210
AQT25396.1 KY295894_p2 catalytic beta propeller domain of endosialidase phrog_1171 tail spike protein tail 1 646 3840
AQT25431.1 KY295894_p37 hypothetical protein phrog_1391 unknown function unknown function 1 24509 24733
AQT25398.1 KY295894_p4 DNA packaging protein phrog_1351 terminase small subunit head and packaging 1 4165 4428
AQT25422.1 KY295894_p28 replicative DNA helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 17817 19517
AQT25429.1 KY295894_p35 hypothetical protein phrog_28149 unknown function unknown function 1 23993 24085
AQT25410.1 KY295894_p16 hypothetical protein phrog_4383 unknown function unknown function 1 12889 13068
AQT25424.1 KY295894_p30 hypothetical protein phrog_20928 unknown function unknown function 1 22052 22210
AQT25395.1 KY295894_p1 hypothetical protein singleton unknown function unknown function 1 27 581
AQT25404.1 KY295894_p10 DNA mimic ocr phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 8618 8962
AQT25430.1 KY295894_p36 hypothetical protein phrog_1447 unknown function unknown function 1 24222 24494
AQT25400.1 KY295894_p6 hypothetical protein phrog_38 terminase large subunit head and packaging 1 4976 6739
AQT25417.1 KY295894_p23 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 16194 16646
AQT25421.1 KY295894_p27 hypothetical protein phrog_6794 unknown function unknown function 1 17627 17806
AQT25441.1 KY295894_p47 hypothetical protein phrog_805 internal virion protein head and packaging 1 33109 33696
AQT25420.1 KY295894_p26 hypothetical protein phrog_1950 unknown function unknown function 1 17343 17558
AQT25402.1 KY295894_p8 alpha,alpha-trehalase phrog_30192 unknown function unknown function 1 7852 8067
AQT25432.1 KY295894_p38 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 24774 25142
AQT25413.1 KY295894_p19 hypothetical protein phrog_1777 unknown function unknown function 1 14502 14765
AQT25403.1 KY295894_p9 hypothetical protein phrog_10124 unknown function unknown function 1 8285 8530
AQT25433.1 KY295894_p39 virion assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 25135 25383
AQT25439.1 KY295894_p45 tail tube phrog_457 tail protein tail 1 30220 32577
AQT25426.1 KY295894_p32 HNS binding protein phrog_1334 unknown function unknown function 1 22497 22706
AQT25423.1 KY295894_p29 thermostable DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 19881 22052
AQT25435.1 KY295894_p41 capsid assembly protein phrog_1052 head assembly head and packaging 1 27072 27956
AQT25405.1 KY295894_p11 hypothetical protein phrog_5058 unknown function unknown function 1 8962 9111