Genomic map of Escherichia phage P AB-2017 (KY295898)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY295898
Definition
Escherichia phage P AB-2017, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus; unclassified Kagunavirus.
DB of origin
NUCCORE
Length
41184
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
51.28
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQN31988.1 KY295898_p50 hypothetical protein phrog_5169 unknown function unknown function 1 31745 31978
AQN31961.1 KY295898_p23 hypothetical protein phrog_206 head scaffolding protein head and packaging -1 19519 20145
AQN31949.1 KY295898_p11 superinfection immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 12428 12619
AQN31951.1 KY295898_p13 haloacid dehalogenase-like hydrolase phrog_415 polynucleotide kinase other 1 13785 14270
AQN31948.1 KY295898_p10 tail assembly chaperone phrog_313 Tail assembly chaperone tail -1 11844 12260
AQN31983.1 KY295898_p45 hypothetical protein phrog_653 unknown function unknown function -1 30342 30515
AQN31991.1 KY295898_p53 hypothetical protein phrog_3127 unknown function unknown function 1 34654 35172
AQN31968.1 KY295898_p30 DNA-packaging protein phrog_3064 terminase head and packaging -1 25467 26051
AQN31987.1 KY295898_p49 helix-turn-helix domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 31578 31748
AQN31943.1 KY295898_p5 tail protein phrog_469 tail protein tail -1 5293 7776
AQN31972.1 KY295898_p34 hypothetical protein phrog_5407 unknown function unknown function -1 26700 26876
AQN31980.1 KY295898_p42 hypothetical protein phrog_9632 unknown function unknown function -1 29230 29523
AQN31953.1 KY295898_p15 tail protein phrog_290 minor tail protein tail -1 14853 16019
AQN31939.1 KY295898_p1 Mte8-like protein phrog_1008 DNA methyltransferase other 1 22 702
AQN31985.1 KY295898_p47 hypothetical protein phrog_15836 unknown function unknown function -1 30848 30991
AQN31993.1 KY295898_p55 PD-(D/E)XK nuclease superfamily protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 35485 36735
AQN31990.1 KY295898_p52 transcriptional repressor DicA phrog_3 transcriptional repressor transcription regulation -1 34313 34528
AQN31971.1 KY295898_p33 NinH protein phrog_268 unknown function unknown function -1 26467 26703
AQN32000.1 KY295898_p62 hypothetical protein phrog_4879 unknown function unknown function 1 40815 41006
AQN31964.1 KY295898_p26 tail protein phrog_3945 Hoc-like head decoration head and packaging -1 21141 21602
AQN31965.1 KY295898_p27 hypothetical protein phrog_241 head morphogenesis head and packaging -1 21602 22645
AQN31944.1 KY295898_p6 hypothetical protein phrog_329 minor tail protein tail -1 7839 8204
AQN31981.1 KY295898_p43 hypothetical protein phrog_3766 unknown function unknown function -1 29523 29726
AQN31967.1 KY295898_p29 terminase-like family protein phrog_2 terminase large subunit head and packaging -1 24220 25470
AQN31966.1 KY295898_p28 structural protein phrog_145 portal protein head and packaging -1 22715 24208
AQN31989.1 KY295898_p51 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 32037 34295
AQN31947.1 KY295898_p9 tape measure protein phrog_1538 tail length tape measure protein tail -1 9213 11486
AQN31997.1 KY295898_p59 hypothetical protein phrog_10404 unknown function unknown function 1 40137 40268
AQN31958.1 KY295898_p20 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 17803 18315
AQN31976.1 KY295898_p38 hypothetical protein phrog_2180 unknown function unknown function -1 27622 27771
AQN31946.1 KY295898_p8 hypothetical protein phrog_384 virion structural protein head and packaging -1 8713 9213
AQN31959.1 KY295898_p21 hypothetical protein phrog_16180 unknown function unknown function -1 18319 18486
AQN31952.1 KY295898_p14 ATPase phrog_139 deoxynucleoside monophosphate kinase other 1 14270 14824
AQN31957.1 KY295898_p19 hypothetical protein phrog_3614 unknown function unknown function -1 17183 17800
AQN31955.1 KY295898_p17 tail protein phrog_169 tail completion or Neck1 protein connector -1 16435 16830
AQN31973.1 KY295898_p35 hypothetical protein phrog_9023 unknown function unknown function -1 27042 27290
AQN31941.1 KY295898_p3 exonuclease subunit SbcD phrog_5915 unknown function unknown function 1 2160 2297
AQN31982.1 KY295898_p44 hypothetical protein phrog_6094 unknown function unknown function -1 29726 30274
AQN31977.1 KY295898_p39 lysozyme RrrD phrog_7 endolysin lysis -1 28118 28603
AQN31994.1 KY295898_p56 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 36822 37448
AQN31954.1 KY295898_p16 hypothetical protein phrog_179 tail terminator connector -1 16022 16435
AQN31996.1 KY295898_p58 thermostable DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 37970 40147
AQN31969.1 KY295898_p31 hypothetical protein phrog_10134 unknown function unknown function -1 26145 26315
AQN31984.1 KY295898_p46 hypothetical protein phrog_924 unknown function unknown function -1 30650 30844
AQN31940.1 KY295898_p2 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 739 2163
AQN31974.1 KY295898_p36 hypothetical protein phrog_1402 unknown function unknown function -1 27283 27471
AQN31998.1 KY295898_p60 hypothetical protein phrog_14925 unknown function unknown function 1 40351 40503
AQN31970.1 KY295898_p32 hypothetical protein phrog_22059 unknown function unknown function -1 26312 26470
AQN31942.1 KY295898_p4 catalytic beta propeller domain of endosialidase phrog_1171 tail spike protein tail -1 2326 5280
AQN31995.1 KY295898_p57 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37504 37977
AQN31979.1 KY295898_p41 holin-like class II phrog_2359 holin lysis -1 28846 29154
AQN31963.1 KY295898_p25 spanin singleton unknown function unknown function -1 20581 20799
AQN31992.1 KY295898_p54 hypothetical protein phrog_4965 unknown function unknown function 1 35216 35488
AQN31975.1 KY295898_p37 hypothetical protein phrog_4684 unknown function unknown function -1 27464 27625
AQN31960.1 KY295898_p22 major capsid protein phrog_247 major head protein head and packaging -1 18544 19512
AQN31956.1 KY295898_p18 hypothetical protein phrog_161 head closure Hc1 connector -1 16827 17186
AQN31999.1 KY295898_p61 VRR-NUC domain protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 40500 40784
AQN31978.1 KY295898_p40 holin-like class I phrog_2508 holin lysis -1 28581 28853
AQN31945.1 KY295898_p7 hypothetical protein phrog_396 minor tail protein tail -1 8201 8716
AQN31962.1 KY295898_p24 spanin phrog_1267 Rz-like spanin lysis -1 20225 20488
AQN31986.1 KY295898_p48 hypothetical protein singleton unknown function unknown function -1 30988 31080
AQN31950.1 KY295898_p12 calcineurin-like phosphoesterase superfamily domain protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 12658 13788