| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY303907 |
Definition |
Enterococcus phage EF-P29, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saphexavirus; unclassified Saphexavirus. |
DB of origin |
NUCCORE |
Length |
58984 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
39.76 |
Number of singletons |
3 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU00264.1 | KY303907_p78 | portal protein | phrog_64 | portal protein | head and packaging | -1 | 46525 | 48060 |
| APU00215.1 | KY303907_p29 | hypothetical protein | phrog_13304 | unknown function | unknown function | -1 | 12463 | 12648 |
| APU00212.1 | KY303907_p26 | hypothetical protein | phrog_7488 | unknown function | unknown function | -1 | 8925 | 9320 |
| APU00190.1 | KY303907_p4 | hypothetical protein | phrog_16617 | unknown function | unknown function | -1 | 897 | 1106 |
| APU00280.1 | KY303907_p94 | hypothetical protein | phrog_12919 | unknown function | unknown function | 1 | 55107 | 55814 |
| APU00193.1 | KY303907_p7 | hypothetical protein | phrog_12407 | unknown function | unknown function | -1 | 1877 | 2251 |
| APU00192.1 | KY303907_p6 | hypothetical protein | phrog_13537 | unknown function | unknown function | -1 | 1665 | 1799 |
| APU00231.1 | KY303907_p45 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 19220 | 20584 |
| APU00272.1 | KY303907_p86 | hypothetical protein | phrog_15663 | unknown function | unknown function | 1 | 51594 | 51851 |
| APU00225.1 | KY303907_p39 | crossover junction endodeoxyribonuclease | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 15831 | 16136 |
| APU00229.1 | KY303907_p43 | hypothetical protein | phrog_14383 | unknown function | unknown function | -1 | 18265 | 18489 |
| APU00281.1 | KY303907_p95 | hypothetical protein | phrog_15285 | unknown function | unknown function | 1 | 55815 | 56033 |
| APU00217.1 | KY303907_p31 | hypothetical protein | phrog_14036 | unknown function | unknown function | -1 | 13002 | 13214 |
| APU00257.1 | KY303907_p71 | hypothetical protein | phrog_13043 | unknown function | unknown function | -1 | 42307 | 42687 |
| APU00223.1 | KY303907_p37 | hypothetical protein | phrog_14385 | unknown function | unknown function | -1 | 14640 | 15272 |
| APU00287.1 | KY303907_p101 | hypothetical protein | phrog_12898 | unknown function | unknown function | -1 | 58240 | 58542 |
| APU00238.1 | KY303907_p52 | host recBCD nuclease inhibitor | phrog_6234 | host RecBCD nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 23790 | 23936 |
| APU00208.1 | KY303907_p22 | hypothetical protein | phrog_34040 | unknown function | unknown function | -1 | 7386 | 7667 |
| APU00242.1 | KY303907_p56 | hypothetical protein | phrog_12542 | unknown function | unknown function | -1 | 26103 | 26489 |
| APU00248.1 | KY303907_p62 | CHAP domain protein | phrog_7887 | endolysin | lysis | -1 | 29330 | 30040 |
| APU00188.1 | KY303907_p2 | hypothetical protein | phrog_9817 | unknown function | unknown function | -1 | 224 | 499 |
| APU00253.1 | KY303907_p67 | hypothetical protein | phrog_14263 | unknown function | unknown function | -1 | 40332 | 40556 |
| APU00286.1 | KY303907_p100 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58139 | 58261 |
| APU00265.1 | KY303907_p79 | terminase large subunit | phrog_6672 | terminase large subunit | head and packaging | -1 | 48117 | 48506 |
| APU00269.1 | KY303907_p83 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | -1 | 50400 | 50999 |
| APU00236.1 | KY303907_p50 | hypothetical protein | phrog_13036 | unknown function | unknown function | -1 | 23163 | 23414 |
| APU00241.1 | KY303907_p55 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25553 | 26068 |
| APU00227.1 | KY303907_p41 | hypothetical protein | phrog_1706 | CRISPR/Cas system associated | DNA, RNA and nucleotide metabolism | -1 | 16731 | 17759 |
| APU00261.1 | KY303907_p75 | major capsid protein | phrog_544 | major head protein | head and packaging | -1 | 44124 | 44930 |
| APU00221.1 | KY303907_p35 | hypothetical protein | phrog_15146 | unknown function | unknown function | -1 | 13866 | 13982 |
| APU00191.1 | KY303907_p5 | hypothetical protein | phrog_12228 | unknown function | unknown function | -1 | 1093 | 1527 |
| APU00204.1 | KY303907_p18 | hypothetical protein | phrog_13364 | unknown function | unknown function | -1 | 5860 | 6054 |
| APU00198.1 | KY303907_p12 | hypothetical protein | phrog_14163 | unknown function | unknown function | -1 | 4441 | 4707 |
| APU00278.1 | KY303907_p92 | ABC transporter ATP-binding protein | phrog_13778 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 53459 | 53830 |
| APU00263.1 | KY303907_p77 | head morphogenesis protein | phrog_8089 | head morphogenesis | head and packaging | -1 | 45758 | 46513 |
| APU00195.1 | KY303907_p9 | hypothetical protein | phrog_14566 | unknown function | unknown function | -1 | 2731 | 3054 |
| APU00273.1 | KY303907_p87 | leucine-tRNA ligase | phrog_14024 | unknown function | unknown function | 1 | 51833 | 52237 |
| APU00209.1 | KY303907_p23 | hypothetical protein | phrog_30741 | unknown function | unknown function | -1 | 7680 | 7916 |
| APU00254.1 | KY303907_p68 | hypothetical protein | phrog_14243 | unknown function | unknown function | -1 | 40567 | 41007 |
| APU00268.1 | KY303907_p82 | hypothetical protein | phrog_15507 | unknown function | unknown function | -1 | 50042 | 50386 |
| APU00262.1 | KY303907_p76 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 44979 | 45647 |
| APU00271.1 | KY303907_p85 | hypothetical protein | phrog_13680 | unknown function | unknown function | 1 | 51280 | 51594 |
| APU00251.1 | KY303907_p65 | tail fiber protein | phrog_14260 | tail protein | tail | -1 | 33428 | 37420 |
| APU00222.1 | KY303907_p36 | LPS glycosyltransferase | phrog_12231 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 13985 | 14548 |
| APU00246.1 | KY303907_p60 | hypothetical protein | phrog_6154 | unknown function | unknown function | 1 | 28535 | 28963 |
| APU00230.1 | KY303907_p44 | DNA methyltransferase | phrog_2882 | DNA methyltransferase | other | -1 | 18455 | 19207 |
| APU00197.1 | KY303907_p11 | DNA binding protein | phrog_715 | MazG-like pyrophosphatase | other | -1 | 4134 | 4439 |
| APU00274.1 | KY303907_p88 | methyltransferase | phrog_13576 | methyltransferase | other | 1 | 52239 | 52619 |
| APU00207.1 | KY303907_p21 | cytidine deaminase | phrog_3523 | unknown function | unknown function | -1 | 6776 | 7363 |
| APU00258.1 | KY303907_p72 | hypothetical protein | phrog_13654 | unknown function | unknown function | -1 | 42672 | 43049 |
| APU00189.1 | KY303907_p3 | hypothetical protein | phrog_31670 | unknown function | unknown function | -1 | 589 | 816 |
| APU00277.1 | KY303907_p91 | hypothetical protein | phrog_18442 | unknown function | unknown function | 1 | 53137 | 53439 |
| APU00234.1 | KY303907_p48 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21849 | 22733 |
| APU00279.1 | KY303907_p93 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54274 | 55032 |
| APU00203.1 | KY303907_p17 | hypothetical protein | phrog_10028 | unknown function | unknown function | -1 | 5603 | 5863 |
| APU00260.1 | KY303907_p74 | major tail protein | phrog_341 | major tail protein | tail | -1 | 43532 | 43969 |
| APU00220.1 | KY303907_p34 | hypothetical protein | phrog_16961 | unknown function | unknown function | -1 | 13660 | 13854 |
| APU00219.1 | KY303907_p33 | hypothetical protein | phrog_13949 | unknown function | unknown function | -1 | 13419 | 13646 |
| APU00243.1 | KY303907_p57 | hypothetical protein | phrog_13813 | unknown function | unknown function | -1 | 26492 | 26926 |
| APU00239.1 | KY303907_p53 | hypothetical protein | phrog_13247 | unknown function | unknown function | -1 | 24726 | 24851 |
| APU00202.1 | KY303907_p16 | hypothetical protein | phrog_18544 | unknown function | unknown function | -1 | 5391 | 5603 |
| APU00201.1 | KY303907_p15 | hypothetical protein | phrog_35058 | unknown function | unknown function | -1 | 5160 | 5378 |
| APU00226.1 | KY303907_p40 | hypothetical protein | phrog_13759 | unknown function | unknown function | -1 | 16402 | 16731 |
| APU00275.1 | KY303907_p89 | hypothetical protein | phrog_4188 | unknown function | unknown function | 1 | 52713 | 52862 |
| APU00214.1 | KY303907_p28 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 9852 | 12383 |
| APU00256.1 | KY303907_p70 | tail protein | phrog_176 | tail terminator | connector | -1 | 41860 | 42294 |
| APU00266.1 | KY303907_p80 | terminase large subunit | phrog_3717 | terminase large subunit | head and packaging | -1 | 48908 | 49711 |
| APU00235.1 | KY303907_p49 | hypothetical protein | phrog_14109 | unknown function | unknown function | -1 | 22809 | 22997 |
| APU00282.1 | KY303907_p96 | hypothetical protein | phrog_13641 | unknown function | unknown function | 1 | 56035 | 56247 |
| APU00249.1 | KY303907_p63 | hypothetical protein | phrog_7298 | unknown function | unknown function | -1 | 30155 | 30376 |
| APU00244.1 | KY303907_p58 | hypothetical protein | phrog_6883 | unknown function | unknown function | -1 | 26979 | 27803 |
| APU00187.1 | KY303907_p1 | hypothetical protein | phrog_15914 | unknown function | unknown function | -1 | 16 | 162 |
| APU00206.1 | KY303907_p20 | hypothetical protein | phrog_14376 | unknown function | unknown function | -1 | 6565 | 6765 |
| APU00224.1 | KY303907_p38 | adenylate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 15265 | 15834 |
| APU00270.1 | KY303907_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51118 | 51240 |
| APU00252.1 | KY303907_p66 | minor capsid protein | phrog_1533 | tail length tape measure protein | tail | -1 | 37434 | 40319 |
| APU00233.1 | KY303907_p47 | transcriptional regulator | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 21421 | 21774 |
| APU00216.1 | KY303907_p30 | hypothetical protein | phrog_13373 | unknown function | unknown function | -1 | 12648 | 13001 |
| APU00196.1 | KY303907_p10 | hypothetical protein | phrog_26044 | unknown function | unknown function | -1 | 3816 | 4121 |
| APU00259.1 | KY303907_p73 | head-tail connector family protein | phrog_132 | head-tail adaptor | connector | -1 | 43065 | 43469 |
| APU00211.1 | KY303907_p25 | ATP-dependent metalloprotease | phrog_13838 | ATP-dependent protease | other | -1 | 8237 | 8932 |
| APU00218.1 | KY303907_p32 | hypothetical protein | phrog_13437 | unknown function | unknown function | -1 | 13217 | 13426 |
| APU00232.1 | KY303907_p46 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 20596 | 21372 |
| APU00194.1 | KY303907_p8 | hypothetical protein | phrog_13322 | unknown function | unknown function | -1 | 2244 | 2630 |
| APU00267.1 | KY303907_p81 | holin | phrog_1299 | holin | lysis | -1 | 49775 | 50023 |
| APU00285.1 | KY303907_p99 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56837 | 57166 |
| APU00276.1 | KY303907_p90 | NrdH-redoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 52875 | 53135 |
| APU00205.1 | KY303907_p19 | hypothetical protein | phrog_9042 | unknown function | unknown function | -1 | 6132 | 6551 |
| APU00228.1 | KY303907_p42 | HNH homing endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 17752 | 18192 |
| APU00240.1 | KY303907_p54 | hypothetical protein | phrog_7571 | unknown function | unknown function | -1 | 25351 | 25551 |
| APU00245.1 | KY303907_p59 | HNH homing endonuclease | phrog_20162 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28309 | 28533 |
| APU00200.1 | KY303907_p14 | hypothetical protein | phrog_13735 | unknown function | unknown function | -1 | 4961 | 5170 |
| APU00213.1 | KY303907_p27 | hypothetical protein | phrog_7488 | unknown function | unknown function | -1 | 9322 | 9777 |
| APU00210.1 | KY303907_p24 | hypothetical protein | phrog_19055 | unknown function | unknown function | -1 | 7900 | 8178 |
| APU00284.1 | KY303907_p98 | HNH homing endonuclease | singleton | unknown function | unknown function | 1 | 56653 | 56823 |
| APU00283.1 | KY303907_p97 | hypothetical protein | phrog_15076 | unknown function | unknown function | 1 | 56435 | 56575 |
| APU00250.1 | KY303907_p64 | minor structural protein | phrog_12329 | virion structural protein | head and packaging | -1 | 30389 | 33415 |
| APU00247.1 | KY303907_p61 | head morphogenesis protein | phrog_27234 | unknown function | unknown function | 1 | 29083 | 29274 |
| APU00237.1 | KY303907_p51 | hypothetical protein | phrog_17912 | unknown function | unknown function | -1 | 23414 | 23788 |
| APU00255.1 | KY303907_p69 | major tail protein | phrog_41 | major tail protein | tail | -1 | 41150 | 41839 |
| APU00199.1 | KY303907_p13 | hypothetical protein | phrog_36066 | unknown function | unknown function | -1 | 4700 | 4816 |