Genomic map of Enterococcus phage EF-P29 (KY303907)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY303907
Definition
Enterococcus phage EF-P29, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saphexavirus; unclassified Saphexavirus.
DB of origin
NUCCORE
Length
58984
Host Name
Enterococcus faecalis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
101
%GC
39.76
Number of singletons
3
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU00264.1 KY303907_p78 portal protein phrog_64 portal protein head and packaging -1 46525 48060
APU00215.1 KY303907_p29 hypothetical protein phrog_13304 unknown function unknown function -1 12463 12648
APU00212.1 KY303907_p26 hypothetical protein phrog_7488 unknown function unknown function -1 8925 9320
APU00190.1 KY303907_p4 hypothetical protein phrog_16617 unknown function unknown function -1 897 1106
APU00280.1 KY303907_p94 hypothetical protein phrog_12919 unknown function unknown function 1 55107 55814
APU00193.1 KY303907_p7 hypothetical protein phrog_12407 unknown function unknown function -1 1877 2251
APU00192.1 KY303907_p6 hypothetical protein phrog_13537 unknown function unknown function -1 1665 1799
APU00231.1 KY303907_p45 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 19220 20584
APU00272.1 KY303907_p86 hypothetical protein phrog_15663 unknown function unknown function 1 51594 51851
APU00225.1 KY303907_p39 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 15831 16136
APU00229.1 KY303907_p43 hypothetical protein phrog_14383 unknown function unknown function -1 18265 18489
APU00281.1 KY303907_p95 hypothetical protein phrog_15285 unknown function unknown function 1 55815 56033
APU00217.1 KY303907_p31 hypothetical protein phrog_14036 unknown function unknown function -1 13002 13214
APU00257.1 KY303907_p71 hypothetical protein phrog_13043 unknown function unknown function -1 42307 42687
APU00223.1 KY303907_p37 hypothetical protein phrog_14385 unknown function unknown function -1 14640 15272
APU00287.1 KY303907_p101 hypothetical protein phrog_12898 unknown function unknown function -1 58240 58542
APU00238.1 KY303907_p52 host recBCD nuclease inhibitor phrog_6234 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 23790 23936
APU00208.1 KY303907_p22 hypothetical protein phrog_34040 unknown function unknown function -1 7386 7667
APU00242.1 KY303907_p56 hypothetical protein phrog_12542 unknown function unknown function -1 26103 26489
APU00248.1 KY303907_p62 CHAP domain protein phrog_7887 endolysin lysis -1 29330 30040
APU00188.1 KY303907_p2 hypothetical protein phrog_9817 unknown function unknown function -1 224 499
APU00253.1 KY303907_p67 hypothetical protein phrog_14263 unknown function unknown function -1 40332 40556
APU00286.1 KY303907_p100 hypothetical protein singleton unknown function unknown function 1 58139 58261
APU00265.1 KY303907_p79 terminase large subunit phrog_6672 terminase large subunit head and packaging -1 48117 48506
APU00269.1 KY303907_p83 terminase small subunit phrog_51 terminase small subunit head and packaging -1 50400 50999
APU00236.1 KY303907_p50 hypothetical protein phrog_13036 unknown function unknown function -1 23163 23414
APU00241.1 KY303907_p55 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25553 26068
APU00227.1 KY303907_p41 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism -1 16731 17759
APU00261.1 KY303907_p75 major capsid protein phrog_544 major head protein head and packaging -1 44124 44930
APU00221.1 KY303907_p35 hypothetical protein phrog_15146 unknown function unknown function -1 13866 13982
APU00191.1 KY303907_p5 hypothetical protein phrog_12228 unknown function unknown function -1 1093 1527
APU00204.1 KY303907_p18 hypothetical protein phrog_13364 unknown function unknown function -1 5860 6054
APU00198.1 KY303907_p12 hypothetical protein phrog_14163 unknown function unknown function -1 4441 4707
APU00278.1 KY303907_p92 ABC transporter ATP-binding protein phrog_13778 ABC transporter moron, auxiliary metabolic gene and host takeover 1 53459 53830
APU00263.1 KY303907_p77 head morphogenesis protein phrog_8089 head morphogenesis head and packaging -1 45758 46513
APU00195.1 KY303907_p9 hypothetical protein phrog_14566 unknown function unknown function -1 2731 3054
APU00273.1 KY303907_p87 leucine-tRNA ligase phrog_14024 unknown function unknown function 1 51833 52237
APU00209.1 KY303907_p23 hypothetical protein phrog_30741 unknown function unknown function -1 7680 7916
APU00254.1 KY303907_p68 hypothetical protein phrog_14243 unknown function unknown function -1 40567 41007
APU00268.1 KY303907_p82 hypothetical protein phrog_15507 unknown function unknown function -1 50042 50386
APU00262.1 KY303907_p76 hypothetical protein phrog_172 head scaffolding protein head and packaging -1 44979 45647
APU00271.1 KY303907_p85 hypothetical protein phrog_13680 unknown function unknown function 1 51280 51594
APU00251.1 KY303907_p65 tail fiber protein phrog_14260 tail protein tail -1 33428 37420
APU00222.1 KY303907_p36 LPS glycosyltransferase phrog_12231 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 13985 14548
APU00246.1 KY303907_p60 hypothetical protein phrog_6154 unknown function unknown function 1 28535 28963
APU00230.1 KY303907_p44 DNA methyltransferase phrog_2882 DNA methyltransferase other -1 18455 19207
APU00197.1 KY303907_p11 DNA binding protein phrog_715 MazG-like pyrophosphatase other -1 4134 4439
APU00274.1 KY303907_p88 methyltransferase phrog_13576 methyltransferase other 1 52239 52619
APU00207.1 KY303907_p21 cytidine deaminase phrog_3523 unknown function unknown function -1 6776 7363
APU00258.1 KY303907_p72 hypothetical protein phrog_13654 unknown function unknown function -1 42672 43049
APU00189.1 KY303907_p3 hypothetical protein phrog_31670 unknown function unknown function -1 589 816
APU00277.1 KY303907_p91 hypothetical protein phrog_18442 unknown function unknown function 1 53137 53439
APU00234.1 KY303907_p48 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 21849 22733
APU00279.1 KY303907_p93 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54274 55032
APU00203.1 KY303907_p17 hypothetical protein phrog_10028 unknown function unknown function -1 5603 5863
APU00260.1 KY303907_p74 major tail protein phrog_341 major tail protein tail -1 43532 43969
APU00220.1 KY303907_p34 hypothetical protein phrog_16961 unknown function unknown function -1 13660 13854
APU00219.1 KY303907_p33 hypothetical protein phrog_13949 unknown function unknown function -1 13419 13646
APU00243.1 KY303907_p57 hypothetical protein phrog_13813 unknown function unknown function -1 26492 26926
APU00239.1 KY303907_p53 hypothetical protein phrog_13247 unknown function unknown function -1 24726 24851
APU00202.1 KY303907_p16 hypothetical protein phrog_18544 unknown function unknown function -1 5391 5603
APU00201.1 KY303907_p15 hypothetical protein phrog_35058 unknown function unknown function -1 5160 5378
APU00226.1 KY303907_p40 hypothetical protein phrog_13759 unknown function unknown function -1 16402 16731
APU00275.1 KY303907_p89 hypothetical protein phrog_4188 unknown function unknown function 1 52713 52862
APU00214.1 KY303907_p28 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 9852 12383
APU00256.1 KY303907_p70 tail protein phrog_176 tail terminator connector -1 41860 42294
APU00266.1 KY303907_p80 terminase large subunit phrog_3717 terminase large subunit head and packaging -1 48908 49711
APU00235.1 KY303907_p49 hypothetical protein phrog_14109 unknown function unknown function -1 22809 22997
APU00282.1 KY303907_p96 hypothetical protein phrog_13641 unknown function unknown function 1 56035 56247
APU00249.1 KY303907_p63 hypothetical protein phrog_7298 unknown function unknown function -1 30155 30376
APU00244.1 KY303907_p58 hypothetical protein phrog_6883 unknown function unknown function -1 26979 27803
APU00187.1 KY303907_p1 hypothetical protein phrog_15914 unknown function unknown function -1 16 162
APU00206.1 KY303907_p20 hypothetical protein phrog_14376 unknown function unknown function -1 6565 6765
APU00224.1 KY303907_p38 adenylate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 15265 15834
APU00270.1 KY303907_p84 hypothetical protein singleton unknown function unknown function -1 51118 51240
APU00252.1 KY303907_p66 minor capsid protein phrog_1533 tail length tape measure protein tail -1 37434 40319
APU00233.1 KY303907_p47 transcriptional regulator phrog_323 transcriptional regulator, D5-like transcription regulation -1 21421 21774
APU00216.1 KY303907_p30 hypothetical protein phrog_13373 unknown function unknown function -1 12648 13001
APU00196.1 KY303907_p10 hypothetical protein phrog_26044 unknown function unknown function -1 3816 4121
APU00259.1 KY303907_p73 head-tail connector family protein phrog_132 head-tail adaptor connector -1 43065 43469
APU00211.1 KY303907_p25 ATP-dependent metalloprotease phrog_13838 ATP-dependent protease other -1 8237 8932
APU00218.1 KY303907_p32 hypothetical protein phrog_13437 unknown function unknown function -1 13217 13426
APU00232.1 KY303907_p46 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 20596 21372
APU00194.1 KY303907_p8 hypothetical protein phrog_13322 unknown function unknown function -1 2244 2630
APU00267.1 KY303907_p81 holin phrog_1299 holin lysis -1 49775 50023
APU00285.1 KY303907_p99 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56837 57166
APU00276.1 KY303907_p90 NrdH-redoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 52875 53135
APU00205.1 KY303907_p19 hypothetical protein phrog_9042 unknown function unknown function -1 6132 6551
APU00228.1 KY303907_p42 HNH homing endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17752 18192
APU00240.1 KY303907_p54 hypothetical protein phrog_7571 unknown function unknown function -1 25351 25551
APU00245.1 KY303907_p59 HNH homing endonuclease phrog_20162 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28309 28533
APU00200.1 KY303907_p14 hypothetical protein phrog_13735 unknown function unknown function -1 4961 5170
APU00213.1 KY303907_p27 hypothetical protein phrog_7488 unknown function unknown function -1 9322 9777
APU00210.1 KY303907_p24 hypothetical protein phrog_19055 unknown function unknown function -1 7900 8178
APU00284.1 KY303907_p98 HNH homing endonuclease singleton unknown function unknown function 1 56653 56823
APU00283.1 KY303907_p97 hypothetical protein phrog_15076 unknown function unknown function 1 56435 56575
APU00250.1 KY303907_p64 minor structural protein phrog_12329 virion structural protein head and packaging -1 30389 33415
APU00247.1 KY303907_p61 head morphogenesis protein phrog_27234 unknown function unknown function 1 29083 29274
APU00237.1 KY303907_p51 hypothetical protein phrog_17912 unknown function unknown function -1 23414 23788
APU00255.1 KY303907_p69 major tail protein phrog_41 major tail protein tail -1 41150 41839
APU00199.1 KY303907_p13 hypothetical protein phrog_36066 unknown function unknown function -1 4700 4816