| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY348865 |
Definition |
Mycobacterium phage Bubbles123, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
57647 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
61.37 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU93016.1 | KY348865_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8557 | 9108 |
| APU93097.1 | KY348865_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6798 | 7124 |
| APU93074.1 | KY348865_p77 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 48885 | 49397 |
| APU93034.1 | KY348865_p32 | lysin A | phrog_700 | endolysin | lysis | 1 | 27209 | 28501 |
| APU93030.1 | KY348865_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 26145 | 26429 |
| APU93019.1 | KY348865_p15 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 10056 | 13727 |
| APU93093.1 | KY348865_p97 | hypothetical protein | phrog_17935 | unknown function | unknown function | 1 | 55981 | 56109 |
| APU93045.1 | KY348865_p43 | CRO protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35334 | 35534 |
| APU93040.1 | KY348865_p38 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 31264 | 31485 |
| APU93102.1 | KY348865_p64 | hypothetical protein | phrog_7443 | unknown function | unknown function | 1 | 44481 | 44702 |
| APU93061.1 | KY348865_p60 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41257 | 41835 |
| APU93008.1 | KY348865_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| APU93047.1 | KY348865_p45 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 36458 | 36757 |
| APU93017.1 | KY348865_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8557 | 9493 |
| APU93075.1 | KY348865_p78 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 49394 | 49753 |
| APU93036.1 | KY348865_p34 | holin | phrog_443 | holin | lysis | 1 | 29508 | 29741 |
| APU93084.1 | KY348865_p87 | G-I-Y Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51527 | 52054 |
| APU93099.1 | KY348865_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 26436 | 26582 |
| APU93087.1 | KY348865_p90 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 53039 | 53269 |
| APU93031.1 | KY348865_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26579 | 26746 |
| APU93051.1 | KY348865_p50 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37706 | 37882 |
| APU93044.1 | KY348865_p42 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 34513 | 35115 |
| APU93010.1 | KY348865_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| APU93042.1 | KY348865_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32413 | 33714 |
| APU93039.1 | KY348865_p37 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 30356 | 31177 |
| APU93027.1 | KY348865_p24 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 24345 | 24983 |
| APU93023.1 | KY348865_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 18112 | 20649 |
| APU93052.1 | KY348865_p51 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37879 | 38607 |
| APU93033.1 | KY348865_p31 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 27039 | 27212 |
| APU93072.1 | KY348865_p75 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 48468 | 48611 |
| APU93106.1 | KY348865_p100 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56967 | 57311 |
| APU93059.1 | KY348865_p58 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40773 | 41003 |
| APU93060.1 | KY348865_p59 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41000 | 41260 |
| APU93086.1 | KY348865_p89 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 52865 | 53032 |
| APU93053.1 | KY348865_p52 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38682 | 38978 |
| APU93056.1 | KY348865_p55 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39759 | 40259 |
| APU93049.1 | KY348865_p48 | hypothetical protein | phrog_35596 | unknown function | unknown function | 1 | 37249 | 37524 |
| APU93029.1 | KY348865_p26 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25794 | 25994 |
| APU93020.1 | KY348865_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13728 | 15437 |
| APU93101.1 | KY348865_p61 | HNH endonuclease | phrog_14515 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41991 | 42194 |
| APU93021.1 | KY348865_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 15521 | 17230 |
| APU93037.1 | KY348865_p35 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29738 | 30112 |
| APU93062.1 | KY348865_p62 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 42191 | 43537 |
| APU93090.1 | KY348865_p93 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 53880 | 54122 |
| APU93073.1 | KY348865_p76 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 48608 | 48892 |
| APU93096.1 | KY348865_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5896 | 6465 |
| APU93011.1 | KY348865_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4454 | 5047 |
| APU93089.1 | KY348865_p92 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 53470 | 53883 |
| APU93098.1 | KY348865_p21 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 22535 | 23695 |
| APU93064.1 | KY348865_p65 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 44699 | 44848 |
| APU93105.1 | KY348865_p96 | hypothetical protein | phrog_26719 | unknown function | unknown function | 1 | 55766 | 55984 |
| APU93076.1 | KY348865_p79 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 49750 | 49878 |
| APU93069.1 | KY348865_p71 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 47407 | 47667 |
| APU93080.1 | KY348865_p83 | hypothetical protein | phrog_4334 | unknown function | unknown function | 1 | 50379 | 50831 |
| APU93015.1 | KY348865_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7629 | 8438 |
| APU93067.1 | KY348865_p69 | G-I-Y Y-I-G endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45888 | 46448 |
| APU93028.1 | KY348865_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24980 | 25789 |
| APU93065.1 | KY348865_p67 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 45600 | 45761 |
| APU93038.1 | KY348865_p36 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 30136 | 30369 |
| APU93032.1 | KY348865_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26821 | 27042 |
| APU93024.1 | KY348865_p20 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 20646 | 22532 |
| APU93091.1 | KY348865_p94 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 54115 | 54276 |
| APU93009.1 | KY348865_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| APU93025.1 | KY348865_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23713 | 24054 |
| APU93035.1 | KY348865_p33 | lysin B | phrog_102 | endolysin | lysis | 1 | 28498 | 29499 |
| APU93079.1 | KY348865_p82 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 50242 | 50379 |
| APU93088.1 | KY348865_p91 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 53273 | 53473 |
| APU93078.1 | KY348865_p81 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50063 | 50242 |
| APU93063.1 | KY348865_p63 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43534 | 44484 |
| APU93007.1 | KY348865_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| APU93022.1 | KY348865_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17285 | 18115 |
| APU93104.1 | KY348865_p73 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 47867 | 48061 |
| APU93046.1 | KY348865_p44 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35595 | 36461 |
| APU93012.1 | KY348865_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5066 | 5887 |
| APU93071.1 | KY348865_p74 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 48058 | 48471 |
| APU93050.1 | KY348865_p49 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37521 | 37709 |
| APU93094.1 | KY348865_p98 | hypothetical protein | phrog_8053 | unknown function | unknown function | 1 | 56135 | 56344 |
| APU93081.1 | KY348865_p84 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 50828 | 50947 |
| APU93066.1 | KY348865_p68 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 45742 | 45888 |
| APU93041.1 | KY348865_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31819 | 32019 |
| APU93018.1 | KY348865_p14 | HNH endonuclease | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9517 | 10056 |
| APU93085.1 | KY348865_p88 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52051 | 52722 |
| APU93013.1 | KY348865_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6462 | 6791 |
| APU93048.1 | KY348865_p47 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 37055 | 37252 |
| APU93026.1 | KY348865_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 24077 | 24331 |
| APU93083.1 | KY348865_p86 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 51173 | 51424 |
| APU93082.1 | KY348865_p85 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 50944 | 51180 |
| APU93095.1 | KY348865_p99 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56341 | 56967 |
| APU93014.1 | KY348865_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7114 | 7518 |
| APU93068.1 | KY348865_p70 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 46448 | 47410 |
| APU93100.1 | KY348865_p46 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36742 | 36969 |
| APU93055.1 | KY348865_p54 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39367 | 39762 |
| APU93057.1 | KY348865_p56 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40256 | 40621 |
| APU93070.1 | KY348865_p72 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 47667 | 47870 |
| APU93043.1 | KY348865_p41 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33792 | 34247 |
| APU93077.1 | KY348865_p80 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 49875 | 50066 |
| APU93054.1 | KY348865_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38975 | 39367 |
| APU93092.1 | KY348865_p95 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54293 | 55729 |
| APU93058.1 | KY348865_p57 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40621 | 40776 |
| APU93103.1 | KY348865_p66 | DNA methylase | phrog_363 | DNA methyltransferase | other | 1 | 44845 | 45603 |