Genomic map of Mycobacterium phage Bubbles123 (KY348865)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY348865
Definition
Mycobacterium phage Bubbles123, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
57647
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
61.37
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU93016.1 KY348865_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8557 9108
APU93097.1 KY348865_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6798 7124
APU93074.1 KY348865_p77 hypothetical protein phrog_722 unknown function unknown function 1 48885 49397
APU93034.1 KY348865_p32 lysin A phrog_700 endolysin lysis 1 27209 28501
APU93030.1 KY348865_p27 hypothetical protein phrog_411 unknown function unknown function 1 26145 26429
APU93019.1 KY348865_p15 tape measure protein phrog_1942 tail length tape measure protein tail 1 10056 13727
APU93093.1 KY348865_p97 hypothetical protein phrog_17935 unknown function unknown function 1 55981 56109
APU93045.1 KY348865_p43 CRO protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 35334 35534
APU93040.1 KY348865_p38 hypothetical protein phrog_1791 unknown function unknown function 1 31264 31485
APU93102.1 KY348865_p64 hypothetical protein phrog_7443 unknown function unknown function 1 44481 44702
APU93061.1 KY348865_p60 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41257 41835
APU93008.1 KY348865_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
APU93047.1 KY348865_p45 hypothetical protein phrog_5253 unknown function unknown function 1 36458 36757
APU93017.1 KY348865_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8557 9493
APU93075.1 KY348865_p78 hypothetical protein phrog_647 unknown function unknown function 1 49394 49753
APU93036.1 KY348865_p34 holin phrog_443 holin lysis 1 29508 29741
APU93084.1 KY348865_p87 G-I-Y Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 51527 52054
APU93099.1 KY348865_p28 hypothetical protein phrog_932 unknown function unknown function 1 26436 26582
APU93087.1 KY348865_p90 hypothetical protein phrog_6481 unknown function unknown function 1 53039 53269
APU93031.1 KY348865_p29 hypothetical protein phrog_1172 unknown function unknown function 1 26579 26746
APU93051.1 KY348865_p50 hypothetical protein phrog_3381 unknown function unknown function 1 37706 37882
APU93044.1 KY348865_p42 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 34513 35115
APU93010.1 KY348865_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
APU93042.1 KY348865_p40 integrase phrog_1 integrase integration and excision 1 32413 33714
APU93039.1 KY348865_p37 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30356 31177
APU93027.1 KY348865_p24 minor tail protein phrog_2012 minor tail protein tail 1 24345 24983
APU93023.1 KY348865_p19 minor tail protein phrog_346 minor tail protein tail 1 18112 20649
APU93052.1 KY348865_p51 hypothetical protein phrog_1797 unknown function unknown function 1 37879 38607
APU93033.1 KY348865_p31 hypothetical protein phrog_5492 unknown function unknown function 1 27039 27212
APU93072.1 KY348865_p75 hypothetical protein phrog_1311 unknown function unknown function 1 48468 48611
APU93106.1 KY348865_p100 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56967 57311
APU93059.1 KY348865_p58 hypothetical protein phrog_1834 unknown function unknown function 1 40773 41003
APU93060.1 KY348865_p59 hypothetical protein phrog_2632 unknown function unknown function 1 41000 41260
APU93086.1 KY348865_p89 hypothetical protein phrog_1869 unknown function unknown function 1 52865 53032
APU93053.1 KY348865_p52 hypothetical protein phrog_1849 unknown function unknown function 1 38682 38978
APU93056.1 KY348865_p55 hypothetical protein phrog_2096 unknown function unknown function 1 39759 40259
APU93049.1 KY348865_p48 hypothetical protein phrog_35596 unknown function unknown function 1 37249 37524
APU93029.1 KY348865_p26 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25794 25994
APU93020.1 KY348865_p16 minor tail protein phrog_106 minor tail protein tail 1 13728 15437
APU93101.1 KY348865_p61 HNH endonuclease phrog_14515 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41991 42194
APU93021.1 KY348865_p17 minor tail protein phrog_110 minor tail protein tail 1 15521 17230
APU93037.1 KY348865_p35 hypothetical protein phrog_404 minor tail protein tail 1 29738 30112
APU93062.1 KY348865_p62 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 42191 43537
APU93090.1 KY348865_p93 hypothetical protein phrog_1385 unknown function unknown function 1 53880 54122
APU93073.1 KY348865_p76 hypothetical protein phrog_647 unknown function unknown function 1 48608 48892
APU93096.1 KY348865_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5896 6465
APU93011.1 KY348865_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4454 5047
APU93089.1 KY348865_p92 hypothetical protein phrog_1186 unknown function unknown function 1 53470 53883
APU93098.1 KY348865_p21 hypothetical protein phrog_2106 minor tail protein tail 1 22535 23695
APU93064.1 KY348865_p65 hypothetical protein phrog_2704 unknown function unknown function 1 44699 44848
APU93105.1 KY348865_p96 hypothetical protein phrog_26719 unknown function unknown function 1 55766 55984
APU93076.1 KY348865_p79 hypothetical protein phrog_4152 unknown function unknown function 1 49750 49878
APU93069.1 KY348865_p71 hypothetical protein phrog_2080 unknown function unknown function 1 47407 47667
APU93080.1 KY348865_p83 hypothetical protein phrog_4334 unknown function unknown function 1 50379 50831
APU93015.1 KY348865_p11 major tail protein phrog_476 major tail protein tail 1 7629 8438
APU93067.1 KY348865_p69 G-I-Y Y-I-G endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 45888 46448
APU93028.1 KY348865_p25 hypothetical protein phrog_754 minor tail protein tail 1 24980 25789
APU93065.1 KY348865_p67 hypothetical protein phrog_2070 unknown function unknown function 1 45600 45761
APU93038.1 KY348865_p36 hypothetical protein phrog_2004 unknown function unknown function 1 30136 30369
APU93032.1 KY348865_p30 hypothetical protein phrog_747 unknown function unknown function 1 26821 27042
APU93024.1 KY348865_p20 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 20646 22532
APU93091.1 KY348865_p94 hypothetical protein phrog_2057 unknown function unknown function 1 54115 54276
APU93009.1 KY348865_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
APU93025.1 KY348865_p22 hypothetical protein phrog_240 head protein head and packaging 1 23713 24054
APU93035.1 KY348865_p33 lysin B phrog_102 endolysin lysis 1 28498 29499
APU93079.1 KY348865_p82 hypothetical protein phrog_1545 unknown function unknown function 1 50242 50379
APU93088.1 KY348865_p91 hypothetical protein phrog_1694 unknown function unknown function 1 53273 53473
APU93078.1 KY348865_p81 hypothetical protein phrog_1091 unknown function unknown function 1 50063 50242
APU93063.1 KY348865_p63 DNA methylase phrog_67 DNA methyltransferase other 1 43534 44484
APU93007.1 KY348865_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
APU93022.1 KY348865_p18 minor tail protein phrog_732 minor tail protein tail 1 17285 18115
APU93104.1 KY348865_p73 hypothetical protein phrog_1943 unknown function unknown function 1 47867 48061
APU93046.1 KY348865_p44 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35595 36461
APU93012.1 KY348865_p6 major capsid protein phrog_267 major head protein head and packaging 1 5066 5887
APU93071.1 KY348865_p74 hypothetical protein phrog_1573 DNA methyltransferase other 1 48058 48471
APU93050.1 KY348865_p49 hypothetical protein phrog_1816 unknown function unknown function 1 37521 37709
APU93094.1 KY348865_p98 hypothetical protein phrog_8053 unknown function unknown function 1 56135 56344
APU93081.1 KY348865_p84 hypothetical protein phrog_4126 unknown function unknown function 1 50828 50947
APU93066.1 KY348865_p68 hypothetical protein phrog_1311 unknown function unknown function 1 45742 45888
APU93041.1 KY348865_p39 hypothetical protein phrog_2437 unknown function unknown function -1 31819 32019
APU93018.1 KY348865_p14 HNH endonuclease phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9517 10056
APU93085.1 KY348865_p88 hypothetical protein phrog_1467 unknown function unknown function 1 52051 52722
APU93013.1 KY348865_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6462 6791
APU93048.1 KY348865_p47 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 37055 37252
APU93026.1 KY348865_p23 hypothetical protein phrog_2005 minor tail protein tail 1 24077 24331
APU93083.1 KY348865_p86 hypothetical protein phrog_2247 unknown function unknown function 1 51173 51424
APU93082.1 KY348865_p85 hypothetical protein phrog_2278 unknown function unknown function 1 50944 51180
APU93095.1 KY348865_p99 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56341 56967
APU93014.1 KY348865_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7114 7518
APU93068.1 KY348865_p70 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 46448 47410
APU93100.1 KY348865_p46 hypothetical protein phrog_2025 unknown function unknown function 1 36742 36969
APU93055.1 KY348865_p54 WhiB family transcription factor phrog_1333 unknown function unknown function 1 39367 39762
APU93057.1 KY348865_p56 helix-turn-helix DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40256 40621
APU93070.1 KY348865_p72 hypothetical protein phrog_2730 unknown function unknown function 1 47667 47870
APU93043.1 KY348865_p41 hypothetical protein phrog_1948 unknown function unknown function -1 33792 34247
APU93077.1 KY348865_p80 hypothetical protein phrog_1901 unknown function unknown function 1 49875 50066
APU93054.1 KY348865_p53 hypothetical protein phrog_658 unknown function unknown function 1 38975 39367
APU93092.1 KY348865_p95 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 54293 55729
APU93058.1 KY348865_p57 hypothetical protein phrog_2078 unknown function unknown function 1 40621 40776
APU93103.1 KY348865_p66 DNA methylase phrog_363 DNA methyltransferase other 1 44845 45603