Genomic map of Providencia phage vB_PreS_PR1 (KY363465)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY363465
Definition
Providencia phage vB_PreS_PR1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Priunavirus; Providencia virus PR1.
DB of origin
NUCCORE
Length
118537
Host Name
Providencia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
157
%GC
39.51
Number of singletons
69
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQT25319.1 KY363465_p32 hypothetical protein singleton unknown function unknown function -1 16746 17039
AQT25309.1 KY363465_p28 hypothetical protein singleton unknown function unknown function -1 15516 15842
AQT25248.1 KY363465_p47 holin phrog_860 holin lysis -1 22523 23191
AQT25292.1 KY363465_p96 hypothetical protein singleton unknown function unknown function -1 45406 45783
AQT25226.1 KY363465_p18 hypothetical protein singleton unknown function unknown function -1 11044 11940
AQT25225.1 KY363465_p131 exonuclease subunit 1 phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 75217 76194
AQT25237.2 KY363465_p8 hypothetical protein phrog_16673 unknown function unknown function 1 5468 6547
AQT25334.1 KY363465_p128 hypothetical protein singleton unknown function unknown function 1 73663 73917
AQT25257.1 KY363465_p62 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 29374 29895
AQT25234.1 KY363465_p120 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 64656 65444
AQT25345.1 KY363465_p21 hypothetical protein singleton unknown function unknown function -1 13295 13513
AQT25348.1 KY363465_p72 hypothetical protein phrog_28360 unknown function unknown function -1 33757 33966
AQT25219.1 KY363465_p152 portal protein phrog_12 portal protein head and packaging -1 101017 102258
AQT25349.1 KY363465_p29 hypothetical protein singleton unknown function unknown function -1 15832 16023
AQT25241.1 KY363465_p104 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 52173 52892
AQT25221.1 KY363465_p145 major tail protein phrog_3575 major tail protein tail -1 94799 95944
AQT25254.1 KY363465_p66 hypothetical protein singleton unknown function unknown function -1 31002 31553
AQT25342.1 KY363465_p16 hypothetical protein phrog_1585 unknown function unknown function 1 9105 9335
AQT25352.1 KY363465_p71 hypothetical protein phrog_31329 unknown function unknown function -1 33503 33688
AQT25340.1 KY363465_p111 hypothetical protein phrog_5291 unknown function unknown function 1 59749 59988
AQT25291.1 KY363465_p93 hypothetical protein singleton unknown function unknown function -1 44103 44480
AQT25213.1 KY363465_p4 DNA transfer protein A1 phrog_1745 DNA transfer protein other -1 1802 3565
AQT25294.1 KY363465_p38 hypothetical protein singleton unknown function unknown function -1 18754 19122
AQT25240.1 KY363465_p94 hypothetical protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 44492 45220
AQT25282.1 KY363465_p137 tail protein phrog_1084 unknown function unknown function -1 82180 82593
AQT25367.1 KY363465_p15 hypothetical protein singleton unknown function unknown function 1 8910 9041
AQT25360.1 KY363465_p63 hypothetical protein singleton unknown function unknown function -1 30074 30238
AQT25267.1 KY363465_p155 terminase small subunit phrog_3802 terminase small subunit head and packaging -1 104263 104736
AQT25269.1 KY363465_p5 DNA transfer protein A2 phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3641 4105
ARB02554.1 KY363465_p23 hypothetical protein singleton unknown function unknown function -1 13792 13884
AQT25268.1 KY363465_p3 hypothetical protein singleton unknown function unknown function -1 1201 1665
AQT25209.1 KY363465_p105 ribonucleotide reductase of class III (anaerobic) large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 53186 55057
AQT25255.1 KY363465_p43 phosphatase phrog_547 phosphoesterase other -1 20880 21428
AQT25368.1 KY363465_p67 hypothetical protein phrog_2140 unknown function unknown function -1 31935 32066
AQT25356.2 KY363465_p35 hypothetical protein phrog_4605 unknown function unknown function -1 17560 18012
AQT25263.1 KY363465_p55 radical cofactor singleton unknown function unknown function -1 26696 27187
AQT25293.1 KY363465_p129 hypothetical protein phrog_4258 unknown function unknown function 1 73985 74359
AQT25312.1 KY363465_p73 hypothetical protein singleton unknown function unknown function -1 34051 34374
AQT25323.1 KY363465_p64 hypothetical protein phrog_10176 unknown function unknown function -1 30404 30694
AQT25329.1 KY363465_p14 hypothetical protein phrog_27799 unknown function unknown function 1 8579 8848
AQT25363.1 KY363465_p78 hypothetical protein singleton unknown function unknown function -1 36254 36400
AQT25336.1 KY363465_p34 hypothetical protein singleton unknown function unknown function -1 17314 17559
AQT25210.1 KY363465_p156 hypothetical protein phrog_4815 receptor binding tail protein tail -1 104746 106611
AQT25215.1 KY363465_p121 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 65558 67075
AQT25231.1 KY363465_p125 DNA polymerase phrog_5995 DNA polymerase DNA, RNA and nucleotide metabolism 1 70937 71761
AQT25229.1 KY363465_p122 DNA replication primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 67072 67950
AQT25280.1 KY363465_p46 endolysin phrog_465 endolysin lysis -1 22098 22523
AQT25350.1 KY363465_p81 hypothetical protein singleton unknown function unknown function -1 37561 37752
AQT25370.1 KY363465_p75 hypothetical protein singleton unknown function unknown function -1 34717 34839
AQT25308.1 KY363465_p142 hypothetical protein phrog_3914 tail assembly chaperone tail -1 93069 93398
AQT25327.1 KY363465_p12 hypothetical protein singleton unknown function unknown function 1 7548 7820
AQT25287.1 KY363465_p88 hypothetical protein phrog_2650 unknown function unknown function -1 41799 42197
AQT25249.1 KY363465_p24 hypothetical protein singleton unknown function unknown function -1 13887 14516
AQT25212.1 KY363465_p123 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 68023 69840
AQT25307.1 KY363465_p115 hypothetical protein phrog_3696 unknown function unknown function 1 61507 61836
AQT25250.1 KY363465_p140 distal tail protein phrog_1302 distal tail protein tail -1 88551 89159
AQT25290.1 KY363465_p85 hypothetical protein singleton unknown function unknown function -1 40540 40920
AQT25262.1 KY363465_p126 hypothetical protein phrog_4386 unknown function unknown function 1 71764 72258
AQT25246.1 KY363465_p49 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 24074 24778
AQT25339.2 KY363465_p22 hypothetical protein singleton unknown function unknown function -1 13510 13782
AQT25358.1 KY363465_p59 hypothetical protein singleton unknown function unknown function -1 28751 28924
AQT25296.1 KY363465_p86 hypothetical protein phrog_7572 unknown function unknown function -1 40996 41361
AQT25313.1 KY363465_p69 hypothetical protein singleton unknown function unknown function -1 32415 32726
AQT25351.1 KY363465_p60 hypothetical protein singleton unknown function unknown function -1 28933 29121
AQT25275.1 KY363465_p92 SleB phrog_938 endolysin lysis -1 43666 44103
AQT25298.1 KY363465_p30 hypothetical protein singleton unknown function unknown function -1 16005 16361
AQT25362.1 KY363465_p80 hypothetical protein phrog_11405 unknown function unknown function -1 37312 37461
AQT25359.1 KY363465_p68 hypothetical protein singleton unknown function unknown function -1 32150 32317
AQT25232.1 KY363465_p130 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 74346 75164
AQT25297.1 KY363465_p57 hypothetical protein singleton unknown function unknown function -1 27454 27813
AQT25256.1 KY363465_p101 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 47957 48484
AQT25331.1 KY363465_p89 hypothetical protein singleton unknown function unknown function 1 42601 42864
AQT25318.1 KY363465_p108 hypothetical protein singleton unknown function unknown function 1 55665 55961
AQT25317.1 KY363465_p99 hypothetical protein singleton unknown function unknown function -1 46714 47010
AQT25306.1 KY363465_p27 hypothetical protein singleton unknown function unknown function -1 15177 15509
AQT25371.1 KY363465_p10 hypothetical protein singleton unknown function unknown function 1 7181 7297
AQT25320.1 KY363465_p40 hypothetical protein phrog_3880 unknown function unknown function -1 19306 19599
AQT25218.1 KY363465_p154 terminase large subunit phrog_2 terminase large subunit head and packaging -1 102941 104263
AQT25373.1 KY363465_p61 hypothetical protein singleton unknown function unknown function -1 29259 29372
AQT25301.1 KY363465_p26 hypothetical protein singleton unknown function unknown function -1 14818 15165
AQT25347.1 KY363465_p107 hypothetical protein phrog_2210 unknown function unknown function 1 55469 55681
AQT25295.1 KY363465_p41 hypothetical protein singleton unknown function unknown function -1 19674 20042
AQT25253.1 KY363465_p58 hypothetical protein singleton unknown function unknown function -1 27816 28367
AQT25208.1 KY363465_p136 tail fiber protein phrog_22285 tail fiber protein tail -1 79901 82180
AQT25276.1 KY363465_p45 hypothetical protein phrog_4328 unknown function unknown function -1 21586 22020
AQT25270.1 KY363465_p135 deoxyUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 79396 79860
AQT25316.1 KY363465_p20 hypothetical protein singleton unknown function unknown function -1 12885 13181
AQT25281.1 KY363465_p31 acetyltransferase singleton unknown function unknown function -1 16327 16749
AQT25302.1 KY363465_p7 hypothetical protein singleton unknown function unknown function -1 4772 5113
AQT25211.1 KY363465_p132 exonuclease subunit 2 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 76187 78040
AQT25321.1 KY363465_p116 transcriptional regulator protein phrog_4053 transcriptional regulator transcription regulation 1 61877 62170
AQT25288.1 KY363465_p114 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 61096 61494
AQT25354.1 KY363465_p76 hypothetical protein singleton unknown function unknown function -1 34836 35018
AQT25265.1 KY363465_p133 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 78040 78522
AQT25251.1 KY363465_p150 prohead protease phrog_80 head maturation protease head and packaging -1 99234 99812
AQT25314.1 KY363465_p25 hypothetical protein singleton unknown function unknown function -1 14513 14821
AQT25227.1 KY363465_p144 minor tail protein phrog_3889 base plate tail tube protein tail -1 93902 94795
AQT25273.1 KY363465_p36 hypothetical protein phrog_4215 unknown function unknown function -1 17969 18424
AQT25364.1 KY363465_p11 hypothetical protein singleton unknown function unknown function 1 7333 7476
AQT25247.1 KY363465_p19 hypothetical protein singleton unknown function unknown function -1 11986 12687
AQT25361.1 KY363465_p44 hypothetical protein singleton unknown function unknown function -1 21431 21583
AQT25236.1 KY363465_p147 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 96455 97216
AQT25300.1 KY363465_p106 hypothetical protein singleton unknown function unknown function 1 55123 55476
AQT25325.1 KY363465_p90 hypothetical protein singleton unknown function unknown function -1 42938 43222
AQT25283.1 KY363465_p143 hypothetical protein phrog_313 Tail assembly chaperone tail -1 93484 93894
AQT25310.1 KY363465_p37 hypothetical protein phrog_4731 unknown function unknown function -1 18424 18750
AQT25274.1 KY363465_p117 hypothetical protein singleton unknown function unknown function 1 62269 62718
AQT25242.1 KY363465_p112 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 60046 60765
AQT25289.1 KY363465_p70 hypothetical protein phrog_11273 unknown function unknown function -1 33114 33503
AQT25303.1 KY363465_p51 outer membrane lipoprotein i-spanin singleton unknown function unknown function -1 25043 25384
AQT25285.1 KY363465_p52 hypothetical protein phrog_27961 unknown function unknown function -1 25479 25880
AQT25252.1 KY363465_p83 hypothetical protein phrog_1383 virion structural protein head and packaging -1 38805 39374
AQT25207.1 KY363465_p103 ribonucleotide-diphosphate reductase class Ia (aerobic) alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 49661 52045
AQT25311.1 KY363465_p50 outer membrane lipoprotein o-spanin phrog_812 Rz-like spanin lysis -1 24768 25091
AQT25335.1 KY363465_p87 hypothetical protein singleton unknown function unknown function -1 41472 41720
AQT25235.1 KY363465_p124 hypothetical protein phrog_4645 endonuclease DNA, RNA and nucleotide metabolism 1 70092 70877
AQT25346.1 KY363465_p65 hypothetical protein singleton unknown function unknown function -1 30691 30909
AQT25326.1 KY363465_p97 hypothetical protein phrog_4593 unknown function unknown function -1 45871 46149
AQT25228.1 KY363465_p134 flap endonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 78522 79403
AQT25284.1 KY363465_p9 hypothetical protein singleton unknown function unknown function 1 6596 6997
AQT25220.1 KY363465_p151 hypothetical protein singleton unknown function unknown function -1 99809 101020
AQT25260.1 KY363465_p153 hypothetical protein phrog_3497 unknown function unknown function -1 102258 102761
AQT25365.1 KY363465_p17 hypothetical protein singleton unknown function unknown function 1 10551 10694
AQT25205.1 KY363465_p139 tail protein phrog_31 central tail fiber J tail -1 85707 88550
AQT25216.1 KY363465_p149 major capsid protein phrog_10 major head protein head and packaging -1 97800 99227
AQT25353.1 KY363465_p39 hypothetical protein singleton unknown function unknown function -1 19122 19304
AQT25233.1 KY363465_p42 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 20045 20848
AQT25206.1 KY363465_p110 replication origin binding protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 56976 59756
AQT25322.1 KY363465_p6 hypothetical protein singleton unknown function unknown function -1 4376 4666
AQT25355.1 KY363465_p33 hypothetical protein singleton unknown function unknown function -1 17027 17206
AQT25305.1 KY363465_p54 hypothetical protein singleton unknown function unknown function -1 26175 26513
AQT25203.1 KY363465_p141 tape measure protein phrog_3779 tail length tape measure protein tail -1 89276 92989
AQT25245.1 KY363465_p48 Clp protease phrog_1827 ATP-dependent protease other -1 23358 24062
AQT25230.1 KY363465_p100 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 47115 47960
AQT25258.1 KY363465_p148 hypothetical protein phrog_442 head-tail adaptor connector -1 97216 97734
AQT25217.1 KY363465_p127 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 72255 73631
AQT25277.1 KY363465_p91 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 43230 43664
AQT25259.1 KY363465_p157 hypothetical protein singleton unknown function unknown function 1 106776 107294
AQT25338.1 KY363465_p1 hypothetical protein singleton unknown function unknown function -1 63 302
AQT25337.1 KY363465_p53 hypothetical protein singleton unknown function unknown function -1 25870 26115
AQT25261.1 KY363465_p98 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 46217 46714
AQT25264.1 KY363465_p146 hypothetical protein phrog_3907 tail terminator connector -1 95970 96455
ARB02555.1 KY363465_p95 hypothetical protein phrog_5724 unknown function unknown function -1 45162 45455
AQT25278.1 KY363465_p13 hypothetical protein singleton unknown function unknown function 1 7907 8335
AQT25357.1 KY363465_p77 hypothetical protein phrog_6060 anti-termination protein Q-like transcription regulation -1 35906 36082
AQT25223.1 KY363465_p84 hypothetical protein phrog_2087 unknown function unknown function -1 39374 40420
AQT25204.1 KY363465_p138 tail protein phrog_3890 straight fibre tail protein tail -1 82598 85714
AQT25224.1 KY363465_p118 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 62709 63710
AQT25222.1 KY363465_p102 ribonucleotide-diphosphate reductase class Ia (aerobic) beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 48484 49587
AQT25266.1 KY363465_p82 hypothetical protein singleton unknown function unknown function -1 37797 38270
AQT25333.1 KY363465_p113 hypothetical protein singleton unknown function unknown function 1 60765 61019
AQT25332.1 KY363465_p56 hypothetical protein singleton unknown function unknown function -1 27198 27452
AQT25344.1 KY363465_p79 hypothetical protein singleton unknown function unknown function -1 37009 37230
AQT25299.1 KY363465_p74 hypothetical protein phrog_1479 unknown function unknown function -1 34374 34730
AQT25315.1 KY363465_p109 hypothetical protein singleton unknown function unknown function 1 55961 56260
AQT25243.1 KY363465_p2 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other -1 399 1115
AQT25239.1 KY363465_p119 DNA ligase subunit B phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 63903 64649