| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY385384 |
Definition |
Mycobacterium phage SimranZ1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
56335 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
61.26 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AQT25814.1 | KY385384_p2 | terminase small subunit | phrog_4479 | terminase small subunit | head and packaging | 1 | 442 | 699 |
| AQT25860.1 | KY385384_p48 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 35608 | 35766 |
| AQT25885.1 | KY385384_p73 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 45283 | 45501 |
| AQT25863.1 | KY385384_p51 | hypothetical protein | phrog_7382 | unknown function | unknown function | 1 | 36301 | 36516 |
| AQT25836.1 | KY385384_p24 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23429 | 24070 |
| AQT25835.1 | KY385384_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23161 | 23418 |
| AQT25890.1 | KY385384_p78 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 47379 | 47573 |
| AQT25871.1 | KY385384_p59 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40122 | 40400 |
| AQT25901.1 | KY385384_p89 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 50450 | 51094 |
| AQT25903.1 | KY385384_p91 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 51425 | 51607 |
| AQT25850.1 | KY385384_p38 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29682 | 30503 |
| AQT25869.1 | KY385384_p57 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39149 | 39643 |
| AQT25853.1 | KY385384_p41 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 30932 | 31084 |
| AQT25899.1 | KY385384_p87 | hypothetical protein | phrog_12331 | unknown function | unknown function | 1 | 49856 | 50176 |
| AQT25877.1 | KY385384_p65 | AAA ATPase | phrog_1366 | unknown function | unknown function | 1 | 41732 | 42613 |
| AQT25855.1 | KY385384_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 31600 | 32718 |
| AQT25874.1 | KY385384_p62 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40917 | 41147 |
| AQT25906.1 | KY385384_p94 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 51844 | 52101 |
| AQT25846.1 | KY385384_p34 | lysin B | phrog_102 | endolysin | lysis | 1 | 27818 | 28819 |
| AQT25848.1 | KY385384_p36 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29091 | 29438 |
| AQT25849.1 | KY385384_p37 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29462 | 29695 |
| AQT25840.1 | KY385384_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25571 | 25720 |
| AQT25857.1 | KY385384_p45 | HTH DNA binding protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 33523 | 34125 |
| AQT25833.1 | KY385384_p21 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21674 | 22783 |
| AQT25854.1 | KY385384_p42 | hypothetical protein | phrog_8497 | unknown function | unknown function | -1 | 31053 | 31229 |
| AQT25883.1 | KY385384_p71 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 45018 | 45170 |
| AQT25880.1 | KY385384_p68 | hypothetical protein | phrog_6573 | unknown function | unknown function | 1 | 44622 | 44726 |
| AQT25858.1 | KY385384_p46 | HTH DNA binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34262 | 34495 |
| AQT25844.1 | KY385384_p32 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 26356 | 26529 |
| AQT25823.1 | KY385384_p11 | head to tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 6948 | 7352 |
| AQT25824.1 | KY385384_p12 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7460 | 8269 |
| AQT25893.1 | KY385384_p81 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 48125 | 48592 |
| AQT25888.1 | KY385384_p76 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46755 | 46979 |
| AQT25900.1 | KY385384_p88 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 50173 | 50295 |
| AQT25884.1 | KY385384_p72 | hypothetical protein | phrog_6193 | unknown function | unknown function | 1 | 45167 | 45286 |
| AQT25875.1 | KY385384_p63 | hypothetical protein | phrog_6736 | unknown function | unknown function | 1 | 41144 | 41410 |
| AQT25895.1 | KY385384_p83 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 48924 | 49286 |
| AQT25914.1 | KY385384_p102 | serine/threonine kinase | phrog_3297 | kinase | other | 1 | 55162 | 55635 |
| AQT25912.1 | KY385384_p100 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54801 | 54980 |
| AQT25838.1 | KY385384_p26 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24914 | 25126 |
| AQT25856.1 | KY385384_p44 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 32810 | 33259 |
| AQT25852.1 | KY385384_p40 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30802 | 30894 |
| AQT25820.1 | KY385384_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5928 | 6299 |
| AQT25868.1 | KY385384_p56 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38802 | 39149 |
| AQT25839.1 | KY385384_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25268 | 25564 |
| AQT25865.1 | KY385384_p53 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 36878 | 37609 |
| AQT25909.1 | KY385384_p97 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 52735 | 54345 |
| AQT25905.1 | KY385384_p93 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 51689 | 51847 |
| AQT25830.1 | KY385384_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16430 | 17260 |
| AQT25864.1 | KY385384_p52 | hypothetical protein | phrog_25307 | unknown function | unknown function | 1 | 36513 | 36881 |
| AQT25832.1 | KY385384_p20 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19791 | 21677 |
| AQT25862.1 | KY385384_p50 | HTH DNA binding protein | phrog_1816 | unknown function | unknown function | 1 | 36116 | 36304 |
| AQT25894.1 | KY385384_p82 | hypothetical protein | phrog_3447 | unknown function | unknown function | 1 | 48589 | 48927 |
| AQT25815.1 | KY385384_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 671 | 2158 |
| AQT25910.1 | KY385384_p98 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54330 | 54449 |
| AQT25841.1 | KY385384_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25717 | 25854 |
| AQT25827.1 | KY385384_p15 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9342 | 12869 |
| AQT25842.1 | KY385384_p30 | hypothetical protein | phrog_22942 | unknown function | unknown function | 1 | 25902 | 26024 |
| AQT25915.1 | KY385384_p103 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55632 | 56243 |
| AQT25859.1 | KY385384_p47 | HTH DNA binding protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 34553 | 35554 |
| AQT25843.1 | KY385384_p31 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26138 | 26359 |
| AQT25881.1 | KY385384_p69 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 44723 | 44872 |
| AQT25898.1 | KY385384_p86 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 49680 | 49859 |
| AQT25891.1 | KY385384_p79 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 47570 | 47956 |
| AQT25873.1 | KY385384_p61 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40759 | 40917 |
| AQT25904.1 | KY385384_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51600 | 51686 |
| AQT25861.1 | KY385384_p49 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 35859 | 36119 |
| AQT25819.1 | KY385384_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5007 | 5915 |
| AQT25878.1 | KY385384_p66 | hypothetical protein | phrog_2045 | unknown function | unknown function | 1 | 42610 | 43263 |
| AQT25913.1 | KY385384_p101 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54999 | 55121 |
| AQT25897.1 | KY385384_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 49492 | 49683 |
| AQT25896.1 | KY385384_p84 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 49283 | 49495 |
| AQT25821.1 | KY385384_p9 | head to tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6296 | 6625 |
| AQT25887.1 | KY385384_p75 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 46400 | 46762 |
| AQT25872.1 | KY385384_p60 | LuxR protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40397 | 40762 |
| AQT25818.1 | KY385384_p6 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4408 | 4944 |
| AQT25867.1 | KY385384_p55 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38527 | 38805 |
| AQT25822.1 | KY385384_p10 | head to tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6632 | 6958 |
| AQT25825.1 | KY385384_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8388 | 8939 |
| AQT25834.1 | KY385384_p22 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 22801 | 23142 |
| AQT25816.1 | KY385384_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2199 | 3620 |
| AQT25866.1 | KY385384_p54 | RecB-like protein | phrog_3416 | unknown function | unknown function | 1 | 37648 | 38448 |
| AQT25886.1 | KY385384_p74 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45498 | 46403 |
| AQT25813.1 | KY385384_p1 | hypothetical protein | phrog_28756 | unknown function | unknown function | 1 | 11 | 340 |
| AQT25831.1 | KY385384_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17257 | 19794 |
| AQT25826.1 | KY385384_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8388 | 8885 |
| AQT25826.1 | KY385384_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8887 | 9324 |
| AQT25876.1 | KY385384_p64 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 41403 | 41735 |
| AQT25879.1 | KY385384_p67 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43613 | 44584 |
| AQT25892.1 | KY385384_p80 | hypothetical protein | phrog_2740 | unknown function | unknown function | 1 | 47949 | 48128 |
| AQT25908.1 | KY385384_p96 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 52496 | 52738 |
| AQT25902.1 | KY385384_p90 | HTH DNA binding protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 51204 | 51428 |
| AQT25817.1 | KY385384_p5 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3604 | 4329 |
| AQT25828.1 | KY385384_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 12870 | 14579 |
| AQT25837.1 | KY385384_p25 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24067 | 24906 |
| AQT25845.1 | KY385384_p33 | lysin A | phrog_700 | endolysin | lysis | 1 | 26526 | 27818 |
| AQT25882.1 | KY385384_p70 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44869 | 45021 |
| AQT25847.1 | KY385384_p35 | holin | phrog_443 | holin | lysis | 1 | 28834 | 29067 |
| AQT25889.1 | KY385384_p77 | hypothetical protein | phrog_21566 | unknown function | unknown function | 1 | 47116 | 47382 |
| AQT25829.1 | KY385384_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14664 | 16373 |
| AQT25870.1 | KY385384_p58 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39640 | 40125 |
| AQT25907.1 | KY385384_p95 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52098 | 52499 |
| AQT25911.1 | KY385384_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54442 | 54780 |
| AQT25851.1 | KY385384_p39 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30558 | 30809 |