Genomic map of Staphylococcus phage phi575 (KY389063)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY389063
Definition
Staphylococcus phage phi575, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus; unclassified Biseptimavirus.
DB of origin
NUCCORE
Length
42160
Host Name
Staphylococcus sciuri
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
31.84
Number of singletons
10
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQN32225.1 KY389063_p52 antitoxin-like protein singleton unknown function unknown function 1 38629 38787
AQN32194.1 KY389063_p21 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 12707 13132
AQN32176.1 KY389063_p3 hypothetical protein phrog_27728 unknown function unknown function -1 2435 2839
AQN32230.1 KY389063_p57 phospholipase A2 singleton unknown function unknown function 1 41117 41722
AQN32196.1 KY389063_p23 hypothetical protein singleton unknown function unknown function -1 13606 14013
AQN32227.1 KY389063_p54 staphylokinase phrog_4358 kinase other 1 39551 40057
AQN32205.1 KY389063_p32 terminase large subunit phrog_9 terminase large subunit head and packaging 1 17484 19211
AQN32216.1 KY389063_p43 hypothetical protein phrog_187 head-tail adaptor connector 1 25080 25529
AQN32182.1 KY389063_p9 hypothetical protein phrog_1233 unknown function unknown function 1 5335 5640
AQN32214.1 KY389063_p41 tail component phrog_78 tail terminator connector 1 23895 24275
AQN32211.1 KY389063_p38 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 22867 23199
AQN32204.1 KY389063_p31 terminase small subunit phrog_83 terminase small subunit head and packaging 1 17018 17500
AQN32177.1 KY389063_p4 cI-like repressor with LexA and peptidase domain phrog_4 transcriptional repressor transcription regulation -1 2900 3514
AQN32191.1 KY389063_p18 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 10578 11060
AQN32186.1 KY389063_p13 DUF1108 domain-containing protein phrog_401 unknown function unknown function 1 6307 6612
AQN32223.1 KY389063_p50 holin phrog_297 holin lysis 1 37069 37317
AQN32188.1 KY389063_p15 hypothetical protein phrog_31644 unknown function unknown function 1 8648 8983
AQN32224.1 KY389063_p51 N-acetylmuramoyl-L-alanine amidase phrog_833 endolysin lysis 1 37403 38272
AQN32213.1 KY389063_p40 tail-component phrog_5 tail completion or Neck1 protein connector 1 23521 23898
AQN32203.1 KY389063_p30 5-methylcytosine-specific restriction endonuclease McrA-like protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16448 16846
AQN32178.1 KY389063_p5 HTH-type transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 3686 3913
AQN32229.1 KY389063_p56 hypothetical protein singleton unknown function unknown function 1 40826 41098
AQN32181.1 KY389063_p8 DUF2513 domain-containing protein phrog_585 unknown function unknown function -1 4907 5287
AQN32174.1 KY389063_p1 integrase phrog_1 integrase integration and excision -1 75 1256
AQN32195.1 KY389063_p22 hypothetical protein phrog_29608 unknown function unknown function 1 13132 13530
AQN32193.1 KY389063_p20 DUF881 domain-containing protein phrog_28272 unknown function unknown function 1 12006 12713
AQN32200.1 KY389063_p27 hypothetical protein phrog_28466 unknown function unknown function 1 15268 15477
AQN32228.1 KY389063_p55 ZipA protein phrog_35548 unknown function unknown function -1 40086 40586
AQN32209.1 KY389063_p36 major capsid protein phrog_10 major head protein head and packaging 1 21392 22618
AQN32184.1 KY389063_p11 hypothetical protein singleton unknown function unknown function 1 5879 6079
AQN32197.1 KY389063_p24 hypothetical protein singleton unknown function unknown function -1 14023 14547
AQN32183.1 KY389063_p10 hypothetical protein singleton unknown function unknown function 1 5647 5904
AQN32212.1 KY389063_p39 head-tail adaptor phrog_25 head closure Hc1 connector 1 23183 23521
AQN32219.1 KY389063_p46 tail spike with endopeptidase domain phrog_1786 minor head protein head and packaging 1 32300 36100
AQN32222.1 KY389063_p49 DUF2951 domain-containing protein phrog_276 unknown function unknown function 1 36681 36980
AQN32231.1 KY389063_p58 hypothetical protein singleton unknown function unknown function 1 41726 41932
AQN32199.1 KY389063_p26 hypothetical protein singleton unknown function unknown function 1 14871 15287
AQN32187.1 KY389063_p14 ATPase phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 6699 8651
AQN32190.1 KY389063_p17 phosphoribosyl phosphodiesterase -like protein phrog_392 metal-dependent hydrolase other 1 9975 10577
AQN32215.1 KY389063_p42 major tail protein phrog_88 major tail protein tail 1 24288 25004
AQN32206.1 KY389063_p33 hypothetical protein phrog_1142 unknown function unknown function 1 19223 19423
AQN32220.1 KY389063_p47 hypothetical protein phrog_1399 unknown function unknown function 1 36097 36252
AQN32201.1 KY389063_p28 NTP pyrophosphohydrolase MazG family phrog_229 MazG-like pyrophosphatase other 1 15464 15922
AQN32226.1 KY389063_p53 hypothetical protein singleton unknown function unknown function 1 38812 39042
AQN32175.1 KY389063_p2 abortive infection resistance protein phrog_2158 abortive infection resistance protein moron, auxiliary metabolic gene and host takeover -1 1396 2325
AQN32221.1 KY389063_p48 hypothetical protein phrog_1747 unknown function unknown function 1 36290 36631
AQN32185.1 KY389063_p12 hypothetical protein phrog_36030 unknown function unknown function 1 6127 6306
AQN32207.1 KY389063_p34 portal protein phrog_12 portal protein head and packaging 1 19429 20694
AQN32218.1 KY389063_p45 tail component protein phrog_202 distal tail protein Dit tail 1 30764 32284
AQN32179.1 KY389063_p6 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 3937 4713
AQN32189.1 KY389063_p16 recombinational DNA repair protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8980 9879
AQN32217.1 KY389063_p44 tail tape measure protein phrog_167 tail length tape measure protein tail 1 25779 30749
AQN32180.1 KY389063_p7 hypothetical protein phrog_845 unknown function unknown function 1 4726 4920
AQN32208.1 KY389063_p35 head maturation protease phrog_80 head maturation protease head and packaging 1 20741 21283
AQN32202.1 KY389063_p29 RNA polymerase sigma 70 factor phrog_36 transcriptional regulator transcription regulation 1 15956 16357
AQN32192.1 KY389063_p19 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 11093 12022
AQN32198.1 KY389063_p25 hypothetical protein phrog_28665 unknown function unknown function 1 14629 14799
AQN32210.1 KY389063_p37 hypothetical protein phrog_933 unknown function unknown function 1 22661 22855