Genomic map of Escherichia phage vB_Ecos_CEB_EC3a (KY398841)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY398841
Definition
Escherichia phage vB_Ecos_CEB_EC3a, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Braunvirinae; Guelphvirus; Escherichia virus EC3a.
DB of origin
NUCCORE
Length
44234
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
44.21
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQN32371.1 KY398841_p21 hypothetical protein phrog_1989 unknown function unknown function 1 10056 10568
AQN32410.1 KY398841_p65 hypothetical protein singleton unknown function unknown function -1 42967 43146
AQN32418.1 KY398841_p10 hypothetical protein phrog_1312 unknown function unknown function 1 3568 3693
AQN32384.1 KY398841_p60 membrane protein phrog_1804 Rz-like spanin lysis 1 39986 40375
AQN32366.1 KY398841_p34 minor tail protein phrog_18 minor tail protein tail 1 18745 19500
AQN32412.1 KY398841_p57 hypothetical protein phrog_4788 unknown function unknown function 1 39001 39177
AQN32396.1 KY398841_p54 hypothetical protein phrog_2817 unknown function unknown function 1 37200 37448
AQN32368.1 KY398841_p43 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28091 28741
AQN32409.1 KY398841_p9 hypothetical protein phrog_7411 unknown function unknown function 1 3337 3516
AQN32372.1 KY398841_p16 terminase small subunit phrog_606 terminase small subunit head and packaging 1 5157 5663
AQN32373.1 KY398841_p59 endolysin phrog_7 endolysin lysis 1 39525 40010
AQN32416.1 KY398841_p12 hypothetical protein singleton unknown function unknown function 1 3904 4044
AQN32374.1 KY398841_p1 hypothetical protein phrog_4841 unknown function unknown function 1 414 893
AQN32358.1 KY398841_p19 portal protein phrog_146 portal protein head and packaging 1 7706 8974
AQN32420.1 KY398841_p70 membrane protein phrog_25275 membrane protein moron, auxiliary metabolic gene and host takeover 1 44017 44133
AQN32398.1 KY398841_p39 lipoprotein phrog_4281 unknown function unknown function -1 25282 25524
AQN32411.1 KY398841_p69 hypothetical protein phrog_9053 unknown function unknown function -1 43799 43978
AQN32362.1 KY398841_p38 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 24320 25282
AQN32370.1 KY398841_p36 tail assembly protein phrog_32 tail assembly protein tail 1 20250 20822
AQN32380.1 KY398841_p50 hypothetical protein phrog_824 unknown function unknown function 1 36165 36584
AQN32395.1 KY398841_p29 hypothetical protein phrog_22925 unknown function unknown function 1 14389 14637
AQN32353.1 KY398841_p32 tail tape measure protein phrog_24 tail length tape measure protein tail 1 15347 18325
AQN32404.1 KY398841_p58 holin phrog_2877 holin lysis 1 39309 39524
AQN32401.1 KY398841_p7 hypothetical protein phrog_16063 unknown function unknown function 1 2441 2671
AQN32367.1 KY398841_p28 major tail protein phrog_584 major tail protein tail 1 13622 14278
AQN32383.1 KY398841_p27 hypothetical protein phrog_179 tail terminator connector 1 13205 13606
AQN32388.1 KY398841_p61 hypothetical protein phrog_2794 unknown function unknown function -1 40390 40725
AQN32356.1 KY398841_p62 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 40729 42312
AQN32406.1 KY398841_p51 hypothetical protein phrog_6031 unknown function unknown function 1 36663 36857
AQN32365.1 KY398841_p35 minor tail protein phrog_30 minor tail protein tail 1 19511 20269
AQN32381.1 KY398841_p63 hypothetical protein phrog_2684 unknown function unknown function -1 42387 42806
AQN32393.1 KY398841_p6 terminase large subunit phrog_2452 unknown function unknown function 1 2111 2371
AQN32361.1 KY398841_p42 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 27052 28017
AQN32382.1 KY398841_p24 hypothetical protein phrog_302 virion structural protein head and packaging 1 12016 12417
AQN32359.1 KY398841_p56 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 37786 38916
AQN32408.1 KY398841_p15 hypothetical protein phrog_2919 unknown function unknown function 1 4863 5045
AQN32413.1 KY398841_p64 hypothetical protein phrog_5407 unknown function unknown function -1 42806 42967
AQN32417.1 KY398841_p14 membrane protein singleton unknown function unknown function 1 4311 4445
AQN32390.1 KY398841_p8 hypothetical protein phrog_11192 unknown function unknown function 1 2668 2994
AQN32387.1 KY398841_p3 hypothetical protein phrog_7327 unknown function unknown function 1 1079 1414
AQN32391.1 KY398841_p30 tail assembly chaperone phrog_569 tail length tape measure protein tail 1 14677 14991
AQN32355.1 KY398841_p49 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 34169 36163
AQN32354.1 KY398841_p45 tail fiber protein phrog_24092 tail fiber protein tail -1 29244 32054
AQN32357.1 KY398841_p17 terminase large subunit phrog_38 terminase large subunit head and packaging 1 5681 7246
AQN32392.1 KY398841_p31 hypothetical protein phrog_680 tail length tape measure protein tail 1 15000 15311
AQN32403.1 KY398841_p5 membrane protein phrog_34564 unknown function unknown function 1 1699 1917
AQN32364.1 KY398841_p46 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 32142 33065
AQN32378.1 KY398841_p41 hypothetical protein phrog_35664 unknown function unknown function 1 26617 27048
AQN32385.1 KY398841_p25 hypothetical protein phrog_161 head closure Hc1 connector 1 12414 12785
AQN32377.1 KY398841_p26 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 12778 13215
AQN32402.1 KY398841_p52 hypothetical protein phrog_2676 unknown function unknown function 1 36857 37078
AQN32415.1 KY398841_p11 hypothetical protein phrog_22596 unknown function unknown function 1 3690 3833
AQN32363.1 KY398841_p22 major capsid protein phrog_264 major head protein head and packaging 1 10692 11636
AQN32419.1 KY398841_p53 hypothetical protein phrog_2180 unknown function unknown function 1 37078 37203
AQN32400.1 KY398841_p67 hypothetical protein phrog_4448 unknown function unknown function -1 43364 43603
AQN32399.1 KY398841_p13 hypothetical protein phrog_303 unknown function unknown function 1 4044 4283
AQN32407.1 KY398841_p68 hypothetical protein phrog_14327 unknown function unknown function -1 43600 43788
AQN32369.1 KY398841_p40 DNA-binding protein phrog_8235 anti-repressor transcription regulation -1 25604 26251
AQN32394.1 KY398841_p55 hypothetical protein phrog_4596 unknown function unknown function 1 37451 37702
AQN32389.1 KY398841_p18 hypothetical protein phrog_14592 virion structural protein head and packaging 1 7316 7648
AQN32414.1 KY398841_p66 hypothetical protein phrog_4548 unknown function unknown function -1 43203 43364
AQN32375.1 KY398841_p47 HNH-endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 33062 33541
AQN32397.1 KY398841_p23 hypothetical protein phrog_2716 unknown function unknown function 1 11729 11974
AQN32376.1 KY398841_p48 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation -1 33594 34067
AQN32386.1 KY398841_p33 minor tail protein phrog_14 minor tail protein tail 1 18356 18706
AQN32421.1 KY398841_p2 hypothetical protein singleton unknown function unknown function 1 893 1003
AQN32405.1 KY398841_p4 hypothetical protein phrog_13316 unknown function unknown function 1 1485 1685
AQN32379.1 KY398841_p44 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 28786 29217
AQN32360.1 KY398841_p20 prohead protease phrog_530 head maturation protease head and packaging 1 8955 10043
AQN32352.1 KY398841_p37 tail fiber protein phrog_31 central tail fiber J tail 1 20873 24289