Genomic map of Staphylococcus phage Andhra (KY442063)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY442063
Definition
Staphylococcus phage Andhra, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Andhravirus; Staphylococcus virus Andhra.
DB of origin
NUCCORE
Length
18546
Host Name
Staphylococcus epidermidis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
20
%GC
29.82
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQT27836.1 KY442063_p14 endolysin phrog_833 endolysin lysis -1 11861 12760
AQT27831.1 KY442063_p9 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 5006 7297
AQT27832.1 KY442063_p10 peptidase phrog_5979 unknown function unknown function -1 7409 8830
AQT27841.1 KY442063_p19 hypothetical protein phrog_6289 unknown function unknown function -1 17725 17916
AQT27828.1 KY442063_p6 hypothetical protein phrog_33778 virion structural protein head and packaging 1 1905 3116
AQT27825.1 KY442063_p3 single-stranded DNA binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 877 1386
AQT27824.1 KY442063_p2 hypothetical protein phrog_6346 unknown function unknown function 1 647 862
AQT27833.1 KY442063_p11 holin phrog_199 holin lysis -1 8823 9233
AQT27837.1 KY442063_p15 hypothetical protein phrog_37178 unknown function unknown function -1 12796 14625
AQT27829.1 KY442063_p7 hypothetical protein phrog_6099 unknown function unknown function 1 3127 3630
AQT27838.1 KY442063_p16 lower collar protein phrog_3225 adaptor Ad4 connector -1 14638 15357
AQT27830.1 KY442063_p8 encapsidation protein phrog_2150 terminase head and packaging 1 3689 4948
AQT27834.1 KY442063_p12 major tail protein phrog_2248 tail protein tail -1 9242 11008
AQT27823.1 KY442063_p1 hypothetical protein phrog_6274 unknown function unknown function 1 354 593
AQT27827.1 KY442063_p5 hypothetical protein phrog_29230 unknown function unknown function 1 1652 1897
AQT27826.1 KY442063_p4 hypothetical protein phrog_29382 unknown function unknown function 1 1439 1648
AQT27840.1 KY442063_p18 major capsid protein phrog_2006 major head protein head and packaging -1 16495 17712
AQT27842.1 KY442063_p20 hypothetical protein phrog_34730 unknown function unknown function -1 17929 18252
AQT27835.1 KY442063_p13 minor tail protein phrog_30677 tail protein tail -1 11068 11925
AQT27839.1 KY442063_p17 upper collar protein phrog_2038 upper collar connector connector -1 15467 16474