| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY471268 |
Definition |
Gordonia phage Huffy, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vendettavirus; unclassified Vendettavirus. |
DB of origin |
NUCCORE |
Length |
44936 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
82 |
%GC |
66.18 |
Number of singletons |
9 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AQY55660.1 | KY471268_p58 | hypothetical protein | phrog_20343 | unknown function | unknown function | 1 | 37500 | 37685 |
| AQY55609.1 | KY471268_p7 | lysin B | phrog_6187 | unknown function | unknown function | 1 | 2618 | 3259 |
| AQY55607.1 | KY471268_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1371 | 1685 |
| AQY55632.1 | KY471268_p30 | hypothetical protein | phrog_9930 | unknown function | unknown function | 1 | 21998 | 22549 |
| AQY55665.1 | KY471268_p63 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 39006 | 39230 |
| AQY55627.1 | KY471268_p25 | carboxyl peptidase | phrog_2998 | endolysin | lysis | 1 | 18046 | 19071 |
| AQY55610.1 | KY471268_p8 | hypothetical protein | phrog_10594 | unknown function | unknown function | 1 | 3297 | 3662 |
| AQY55650.1 | KY471268_p48 | replication initiator protein | singleton | unknown function | unknown function | 1 | 31348 | 31641 |
| AQY55635.1 | KY471268_p33 | ssDNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24377 | 24667 |
| AQY55677.1 | KY471268_p76 | hypothetical protein | phrog_22893 | unknown function | unknown function | 1 | 43319 | 43498 |
| AQY55646.1 | KY471268_p44 | hypothetical protein | phrog_19376 | unknown function | unknown function | 1 | 29854 | 30105 |
| AQY55611.1 | KY471268_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 3697 | 5304 |
| AQY55672.1 | KY471268_p71 | hypothetical protein | phrog_20979 | unknown function | unknown function | 1 | 42146 | 42301 |
| AQY55666.1 | KY471268_p65 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 39517 | 39708 |
| AQY55605.1 | KY471268_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 792 | 1025 |
| AQY55656.1 | KY471268_p54 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 34269 | 35591 |
| AQY55618.1 | KY471268_p16 | head-to-tail connector protein | phrog_5837 | head closure Hc1 | connector | 1 | 9987 | 10259 |
| AQY55675.1 | KY471268_p74 | hypothetical protein | phrog_26232 | unknown function | unknown function | 1 | 42922 | 43182 |
| AQY55676.1 | KY471268_p75 | hypothetical protein | phrog_23757 | unknown function | unknown function | 1 | 43179 | 43322 |
| AQY55658.1 | KY471268_p56 | hypothetical protein | phrog_27573 | unknown function | unknown function | 1 | 36154 | 36978 |
| AQY55668.1 | KY471268_p67 | hypothetical protein | phrog_19391 | unknown function | unknown function | 1 | 40847 | 41032 |
| AQY55661.1 | KY471268_p59 | hypothetical protein | phrog_25844 | unknown function | unknown function | 1 | 37682 | 37882 |
| AQY55614.1 | KY471268_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7418 | 8725 |
| AQY55613.1 | KY471268_p11 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 6590 | 7387 |
| AQY55651.1 | KY471268_p49 | DNA recombinase | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 31634 | 32308 |
| AQY55655.1 | KY471268_p53 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33407 | 34255 |
| AQY55642.1 | KY471268_p40 | immunity repressor | phrog_19097 | transcriptional repressor | transcription regulation | -1 | 28061 | 28489 |
| AQY55682.1 | KY471268_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44164 | 44316 |
| AQY55623.1 | KY471268_p20 | tail assembly chaperone | phrog_8183 | tail assembly chaperone | tail | 1 | 11657 | 12378 |
| AQY55654.1 | KY471268_p52 | HNH exonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33048 | 33431 |
| AQY55617.1 | KY471268_p15 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 9631 | 9990 |
| AQY55606.1 | KY471268_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1105 | 1320 |
| AQY55643.1 | KY471268_p41 | HTH binding protein | phrog_9103 | transcriptional repressor | transcription regulation | 1 | 28614 | 28880 |
| AQY55659.1 | KY471268_p57 | endodeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37067 | 37507 |
| AQY55667.1 | KY471268_p66 | nuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 39716 | 40840 |
| AQY55608.1 | KY471268_p6 | hypothetical protein | phrog_32167 | unknown function | unknown function | 1 | 1766 | 2539 |
| AQY55683.1 | KY471268_p64 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39227 | 39523 |
| AQY55626.1 | KY471268_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16702 | 18030 |
| AQY55639.1 | KY471268_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25963 | 26190 |
| AQY55664.1 | KY471268_p62 | hypothetical protein | phrog_20479 | unknown function | unknown function | 1 | 38634 | 39005 |
| AQY55630.1 | KY471268_p28 | minor tail protein | phrog_4120 | minor tail protein | tail | 1 | 19747 | 20865 |
| AQY55603.1 | KY471268_p1 | hypothetical protein | phrog_27811 | unknown function | unknown function | -1 | 141 | 344 |
| AQY55647.1 | KY471268_p45 | hypothetical protein | phrog_22062 | unknown function | unknown function | 1 | 30102 | 30215 |
| AQY55616.1 | KY471268_p14 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9110 | 9634 |
| AQY55634.1 | KY471268_p32 | lipoprotein | phrog_22340 | lipoprotein | other | -1 | 23565 | 23978 |
| AQY55621.1 | KY471268_p19 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10919 | 11509 |
| AQY55679.1 | KY471268_p78 | hypothetical protein | phrog_26579 | unknown function | unknown function | 1 | 43647 | 43760 |
| AQY55633.1 | KY471268_p31 | hypothetical protein | phrog_7719 | minor tail protein | tail | 1 | 22562 | 23509 |
| AQY55652.1 | KY471268_p50 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 32295 | 32774 |
| AQY55649.1 | KY471268_p47 | hypothetical protein | phrog_23389 | unknown function | unknown function | 1 | 31221 | 31355 |
| AQY55681.1 | KY471268_p80 | hypothetical protein | phrog_23577 | unknown function | unknown function | 1 | 43893 | 44171 |
| AQY55641.1 | KY471268_p39 | hypothetical protein | phrog_18889 | unknown function | unknown function | -1 | 27339 | 28064 |
| AQY55615.1 | KY471268_p13 | hypothetical protein | phrog_26474 | unknown function | unknown function | 1 | 8801 | 9109 |
| AQY55684.1 | KY471268_p82 | hypothetical protein | phrog_26449 | unknown function | unknown function | 1 | 44313 | 44693 |
| AQY55622.1 | KY471268_p21 | tail assembly chaperone | phrog_5010 | tail assembly chaperone | tail | 1 | 11657 | 12007 |
| AQY55628.1 | KY471268_p26 | membrane protein | phrog_25227 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 19059 | 19298 |
| AQY55648.1 | KY471268_p46 | exonuclease | phrog_298 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30265 | 31221 |
| AQY55624.1 | KY471268_p22 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 12409 | 15867 |
| AQY55619.1 | KY471268_p17 | hypothetical protein | phrog_19684 | unknown function | unknown function | 1 | 10264 | 10476 |
| AQY55670.1 | KY471268_p69 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 41479 | 41826 |
| AQY55669.1 | KY471268_p68 | hypothetical protein | phrog_22856 | unknown function | unknown function | 1 | 41029 | 41388 |
| AQY55674.1 | KY471268_p73 | hypothetical protein | phrog_9751 | unknown function | unknown function | 1 | 42695 | 42925 |
| AQY55638.1 | KY471268_p36 | hypothetical protein | phrog_27085 | unknown function | unknown function | 1 | 25607 | 25825 |
| AQY55636.1 | KY471268_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24664 | 24825 |
| AQY55671.1 | KY471268_p70 | CMP glycosidase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 41826 | 42152 |
| AQY55657.1 | KY471268_p55 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35610 | 36101 |
| AQY55645.1 | KY471268_p43 | hypothetical protein | phrog_20128 | unknown function | unknown function | 1 | 29168 | 29857 |
| AQY55678.1 | KY471268_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43495 | 43650 |
| AQY55625.1 | KY471268_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15864 | 16697 |
| AQY55620.1 | KY471268_p18 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 10469 | 10837 |
| AQY55663.1 | KY471268_p61 | ssDNA binding protein | phrog_20602 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38377 | 38637 |
| AQY55604.1 | KY471268_p2 | hypothetical protein | phrog_23023 | unknown function | unknown function | -1 | 346 | 708 |
| AQY55640.1 | KY471268_p38 | integrase | phrog_1 | integrase | integration and excision | -1 | 26255 | 27370 |
| AQY55629.1 | KY471268_p27 | hypothetical protein | phrog_19139 | unknown function | unknown function | 1 | 19295 | 19744 |
| AQY55673.1 | KY471268_p72 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 42298 | 42690 |
| AQY55637.1 | KY471268_p35 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 25233 | 25508 |
| AQY55644.1 | KY471268_p42 | ssDNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 28877 | 29056 |
| AQY55662.1 | KY471268_p60 | hypothetical protein | phrog_19974 | unknown function | unknown function | 1 | 37869 | 38363 |
| AQY55631.1 | KY471268_p29 | hypothetical protein | phrog_23595 | minor tail protein | tail | 1 | 20868 | 21998 |
| AQY55680.1 | KY471268_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43783 | 43896 |
| AQY55612.1 | KY471268_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 5301 | 6593 |
| AQY55653.1 | KY471268_p51 | hypothetical protein | phrog_19039 | unknown function | unknown function | 1 | 32771 | 33058 |