Genomic map of Staphylococcus phage St 134 (KY471386)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY471386
Definition
Staphylococcus phage St 134, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Andhravirus; Staphylococcus virus St134.
DB of origin
NUCCORE
Length
18275
Host Name
Staphylococcus epidermidis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
21
%GC
30.09
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQT25385.1 KY471386_p12 holin phrog_199 holin lysis -1 8648 9154
AQT25383.1 KY471386_p10 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4830 7121
AQT25394.1 KY471386_p21 hypothetical protein phrog_34730 unknown function unknown function -1 17764 18084
AQT25381.1 KY471386_p8 hypothetical protein phrog_6099 unknown function unknown function 1 2951 3454
AQT25389.1 KY471386_p16 minor structural protein phrog_37178 unknown function unknown function -1 12632 14461
AQT25393.1 KY471386_p20 hypothetical protein phrog_6289 unknown function unknown function -1 17560 17760
AQT25376.1 KY471386_p3 hypothetical protein phrog_6346 unknown function unknown function 1 429 731
AQT25374.1 KY471386_p1 hypothetical protein singleton unknown function unknown function -1 5 109
AQT25391.1 KY471386_p18 upper collar protein phrog_2038 upper collar connector connector -1 15303 16310
AQT25384.1 KY471386_p11 amidase phrog_5979 unknown function unknown function -1 7234 8655
AQT25390.1 KY471386_p17 lower collar protein phrog_3225 adaptor Ad4 connector -1 14474 15322
AQT25375.1 KY471386_p2 hypothetical protein phrog_6274 unknown function unknown function 1 212 499
AQT25387.1 KY471386_p14 tail protein phrog_30677 tail protein tail -1 10904 11707
AQT25388.1 KY471386_p15 N-acetylmuramoyl-L-alanine amidase phrog_833 endolysin lysis -1 11708 12595
AQT25377.1 KY471386_p4 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 746 1138
AQT25380.1 KY471386_p7 tail endopeptidase phrog_33778 virion structural protein head and packaging 1 1729 2940
AQT25379.1 KY471386_p6 hypothetical protein phrog_29230 unknown function unknown function 1 1476 1721
AQT25392.1 KY471386_p19 major capsid protein phrog_2006 major head protein head and packaging -1 16331 17548
AQT25386.1 KY471386_p13 major tail protein phrog_2248 tail protein tail -1 9078 10844
AQT25382.1 KY471386_p9 DNA encapsidation protein phrog_2150 terminase head and packaging 1 3513 4772
AQT25378.1 KY471386_p5 hypothetical protein phrog_29382 unknown function unknown function 1 1254 1472