| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY471386 |
Definition |
Staphylococcus phage St 134, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Andhravirus; Staphylococcus virus St134. |
DB of origin |
NUCCORE |
Length |
18275 |
Host Name |
Staphylococcus epidermidis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
21 |
%GC |
30.09 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AQT25385.1 | KY471386_p12 | holin | phrog_199 | holin | lysis | -1 | 8648 | 9154 |
| AQT25383.1 | KY471386_p10 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4830 | 7121 |
| AQT25394.1 | KY471386_p21 | hypothetical protein | phrog_34730 | unknown function | unknown function | -1 | 17764 | 18084 |
| AQT25381.1 | KY471386_p8 | hypothetical protein | phrog_6099 | unknown function | unknown function | 1 | 2951 | 3454 |
| AQT25389.1 | KY471386_p16 | minor structural protein | phrog_37178 | unknown function | unknown function | -1 | 12632 | 14461 |
| AQT25393.1 | KY471386_p20 | hypothetical protein | phrog_6289 | unknown function | unknown function | -1 | 17560 | 17760 |
| AQT25376.1 | KY471386_p3 | hypothetical protein | phrog_6346 | unknown function | unknown function | 1 | 429 | 731 |
| AQT25374.1 | KY471386_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5 | 109 |
| AQT25391.1 | KY471386_p18 | upper collar protein | phrog_2038 | upper collar connector | connector | -1 | 15303 | 16310 |
| AQT25384.1 | KY471386_p11 | amidase | phrog_5979 | unknown function | unknown function | -1 | 7234 | 8655 |
| AQT25390.1 | KY471386_p17 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | -1 | 14474 | 15322 |
| AQT25375.1 | KY471386_p2 | hypothetical protein | phrog_6274 | unknown function | unknown function | 1 | 212 | 499 |
| AQT25387.1 | KY471386_p14 | tail protein | phrog_30677 | tail protein | tail | -1 | 10904 | 11707 |
| AQT25388.1 | KY471386_p15 | N-acetylmuramoyl-L-alanine amidase | phrog_833 | endolysin | lysis | -1 | 11708 | 12595 |
| AQT25377.1 | KY471386_p4 | single stranded DNA-binding protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 746 | 1138 |
| AQT25380.1 | KY471386_p7 | tail endopeptidase | phrog_33778 | virion structural protein | head and packaging | 1 | 1729 | 2940 |
| AQT25379.1 | KY471386_p6 | hypothetical protein | phrog_29230 | unknown function | unknown function | 1 | 1476 | 1721 |
| AQT25392.1 | KY471386_p19 | major capsid protein | phrog_2006 | major head protein | head and packaging | -1 | 16331 | 17548 |
| AQT25386.1 | KY471386_p13 | major tail protein | phrog_2248 | tail protein | tail | -1 | 9078 | 10844 |
| AQT25382.1 | KY471386_p9 | DNA encapsidation protein | phrog_2150 | terminase | head and packaging | 1 | 3513 | 4772 |
| AQT25378.1 | KY471386_p5 | hypothetical protein | phrog_29382 | unknown function | unknown function | 1 | 1254 | 1472 |