Genomic map of Mycobacterium phage Jabith (KY471460)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY471460
Definition
Mycobacterium phage Jabith, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52715
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
63.73
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQT28208.1 KY471460_p15 major capsid protein phrog_10 major head protein head and packaging 1 12751 13740
AQT28199.1 KY471460_p47 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31418 31765
AQT28222.1 KY471460_p21 head-to-tail connector protein phrog_123 tail terminator connector 1 15248 15667
AQT28271.1 KY471460_p69 hypothetical protein phrog_520 unknown function unknown function -1 41765 42031
AQT28219.1 KY471460_p8 tail protein phrog_356 minor tail protein tail 1 5410 6072
AQT28189.1 KY471460_p56 hypothetical protein phrog_2387 nucleotide kinase other -1 37168 37566
AQT28258.1 KY471460_p86 hypothetical protein phrog_24877 unknown function unknown function -1 47853 48011
AQT28262.1 KY471460_p91 hypothetical protein phrog_9458 unknown function unknown function -1 48991 49212
AQT28260.1 KY471460_p89 hypothetical protein phrog_2223 unknown function unknown function -1 48342 48617
AQT28233.1 KY471460_p29 minor tail protein phrog_404 minor tail protein tail 1 23125 23448
AQT28232.1 KY471460_p28 minor tail protein phrog_352 minor tail protein tail 1 22685 23128
AQT28187.1 KY471460_p54 hypothetical protein phrog_2436 unknown function unknown function -1 36252 36404
AQT28237.1 KY471460_p33 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 26172 26750
AQT28265.1 KY471460_p94 hypothetical protein phrog_3831 unknown function unknown function -1 49654 49851
AQT28217.1 KY471460_p6 minor tail protein phrog_1260 minor tail protein tail 1 3231 4196
AQT28268.1 KY471460_p97 hypothetical protein phrog_1392 unknown function unknown function -1 50158 50880
AQT28207.1 KY471460_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 12204 12725
AQT28220.1 KY471460_p9 lysin A phrog_317 endolysin lysis 1 6279 7676
AQT28282.1 KY471460_p87 hypothetical protein phrog_855 unknown function unknown function -1 48011 48151
AQT28272.1 KY471460_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2356 2652
AQT28280.1 KY471460_p62 hypothetical protein phrog_2187 unknown function unknown function -1 39374 39511
AQT28194.1 KY471460_p41 hypothetical protein phrog_896 unknown function unknown function -1 28481 28699
AQT28251.1 KY471460_p78 hypothetical protein phrog_1178 unknown function unknown function -1 45441 45716
AQT28206.1 KY471460_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11323 12150
AQT28197.1 KY471460_p45 hypothetical protein phrog_18089 unknown function unknown function -1 30844 31083
AQT28225.1 KY471460_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 17215 19761
AQT28221.1 KY471460_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 367 1107
AQT28279.1 KY471460_p70 DNA binding protein phrog_6489 unknown function unknown function -1 42237 42389
AQT28213.1 KY471460_p20 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 14889 15239
AQT28252.1 KY471460_p79 hypothetical protein phrog_1875 unknown function unknown function -1 45713 45943
AQT28205.1 KY471460_p12 portal protein phrog_104 portal protein head and packaging 1 9836 11293
AQT28195.1 KY471460_p42 hypothetical protein phrog_24585 unknown function unknown function -1 28699 28893
AQT28202.1 KY471460_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32757 33326
AQT28229.1 KY471460_p38 hypothetical protein phrog_383 unknown function unknown function -1 27641 28018
AQT28255.1 KY471460_p83 hypothetical protein phrog_2869 unknown function unknown function -1 46580 46756
AQT28259.1 KY471460_p88 membrane domain protein phrog_828 unknown function unknown function -1 48148 48345
AQT28253.1 KY471460_p80 hypothetical protein phrog_8204 unknown function unknown function -1 45940 46143
AQT28224.1 KY471460_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16414 16809
AQT28242.1 KY471460_p68 hypothetical protein phrog_2903 unknown function unknown function -1 41482 41742
AQT28228.1 KY471460_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16414 17222
AQT28223.1 KY471460_p22 major tail protein phrog_117 major tail protein tail 1 15685 16305
AQT28184.1 KY471460_p51 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33338 35359
AQT28254.1 KY471460_p82 membrane domain protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46274 46570
AQT28186.1 KY471460_p53 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 35563 36255
AQT28246.1 KY471460_p73 hypothetical protein phrog_642 unknown function unknown function -1 43020 43247
AQT28192.1 KY471460_p61 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38926 39423
AQT28236.1 KY471460_p32 hypothetical protein phrog_24435 unknown function unknown function 1 25679 25843
AQT28266.1 KY471460_p95 hypothetical protein phrog_519 unknown function unknown function -1 49848 50024
AQT28190.1 KY471460_p57 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37566 37838
AQT28277.1 KY471460_p37 hypothetical protein phrog_27925 unknown function unknown function -1 27489 27644
AQT28188.1 KY471460_p55 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 36408 37175
AQT28214.1 KY471460_p2 VIP2-like toxin phrog_5234 unknown function unknown function 1 1188 2060
AQT28238.1 KY471460_p34 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 26743 27018
AQT28264.1 KY471460_p93 hypothetical protein phrog_6255 unknown function unknown function -1 49413 49652
AQT28201.1 KY471460_p49 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31980 32693
AQT28196.1 KY471460_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29049 30836
AQT28216.1 KY471460_p5 terminase small subunit phrog_226 minor tail protein tail 1 2689 3153
AQT28275.1 KY471460_p43 membrane domain protein phrog_25768 unknown function unknown function -1 28883 29038
AQT28226.1 KY471460_p26 minor tail protein phrog_106 minor tail protein tail 1 19788 20810
AQT28278.1 KY471460_p36 membrane domain protein phrog_542 unknown function unknown function -1 27337 27492
AQT28261.1 KY471460_p90 hypothetical protein phrog_586 unknown function unknown function -1 48638 48991
AQT28257.1 KY471460_p85 hypothetical protein phrog_16722 unknown function unknown function -1 47542 47856
AQT28209.1 KY471460_p16 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 13809 13976
AQT28230.1 KY471460_p39 hypothetical protein phrog_2099 unknown function unknown function -1 28015 28302
AQT28200.1 KY471460_p48 hypothetical protein phrog_690 unknown function unknown function -1 31758 31970
AQT28239.1 KY471460_p65 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 39977 40321
AQT28244.1 KY471460_p71 superinfection immunity protein phrog_1584 unknown function unknown function -1 42386 42712
AQT28211.1 KY471460_p18 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 14354 14524
AQT28249.1 KY471460_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44531 45082
AQT28263.1 KY471460_p92 hypothetical protein phrog_1946 unknown function unknown function -1 49209 49403
AQT28203.1 KY471460_p10 holin phrog_526 holin lysis 1 7673 8059
AQT28191.1 KY471460_p58 hypothetical protein phrog_5618 unknown function unknown function -1 37835 38068
AQT28218.1 KY471460_p7 tail protein phrog_1197 tail protein tail 1 4196 5410
AQT28227.1 KY471460_p27 minor tail protein phrog_110 minor tail protein tail 1 20807 22606
AQT28256.1 KY471460_p84 hypothetical protein phrog_421 unknown function unknown function -1 46753 47511
AQT28235.1 KY471460_p31 minor tail protein singleton unknown function unknown function 1 25442 25630
AQT28273.1 KY471460_p64 membrane domain protein phrog_25051 unknown function unknown function -1 39879 39980
AQT28281.1 KY471460_p81 hypothetical protein phrog_1477 unknown function unknown function -1 46143 46271
AQT28198.1 KY471460_p46 hypothetical protein phrog_2094 unknown function unknown function -1 31080 31418
AQT28210.1 KY471460_p17 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13980 14357
AQT28247.1 KY471460_p74 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43292 44107
AQT28234.1 KY471460_p30 minor tail protein phrog_737 minor tail protein tail 1 23449 25440
AQT28270.1 KY471460_p99 hypothetical protein phrog_1676 unknown function unknown function -1 51215 51532
AQT28185.1 KY471460_p52 hypothetical protein phrog_499 unknown function unknown function -1 35352 35576
AQT28250.1 KY471460_p77 hypothetical protein phrog_4294 unknown function unknown function -1 45280 45441
AQT28240.1 KY471460_p66 hypothetical protein phrog_397 unknown function unknown function -1 40373 40606
AQT28276.1 KY471460_p35 hypothetical protein phrog_5261 unknown function unknown function 1 27074 27235
AQT28248.1 KY471460_p75 hypothetical protein phrog_1562 unknown function unknown function -1 44073 44510
AQT28204.1 KY471460_p11 terminase large subunit phrog_9 terminase large subunit head and packaging 1 8076 9839
AQT28231.1 KY471460_p40 hypothetical protein phrog_10511 unknown function unknown function -1 28299 28481
AQT28267.1 KY471460_p96 hypothetical protein phrog_2124 unknown function unknown function -1 50021 50149
AQT28193.1 KY471460_p59 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38065 38712
AQT28243.1 KY471460_p63 DNA processing chain protein phrog_289 GTP-binding domain other -1 39508 39882
AQT28241.1 KY471460_p67 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40698 41495
AQT28215.1 KY471460_p3 hypothetical protein phrog_3585 immunity protein other 1 2057 2359
AQT28212.1 KY471460_p19 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14521 14889
AQT28274.1 KY471460_p60 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38540 38929
AQT28245.1 KY471460_p72 hypothetical protein phrog_3851 unknown function unknown function -1 42709 43023
AQT28269.1 KY471460_p98 hypothetical protein phrog_2499 unknown function unknown function -1 50883 51077