Genomic map of Lactococcus phage AM1 (KY554768)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554768
Definition
Lactococcus phage AM1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
125658
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
178
%GC
32.55
Number of singletons
1
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM66143.1 KY554768_p16 hypothetical protein phrog_8095 unknown function unknown function 1 9028 9252
ARM66166.1 KY554768_p39 hypothetical protein phrog_12408 unknown function unknown function -1 19261 19404
ARM66197.1 KY554768_p70 hypothetical protein phrog_11247 unknown function unknown function 1 37538 38017
ARM66286.1 KY554768_p159 hypothetical protein phrog_8442 unknown function unknown function -1 108731 109150
ARM66301.1 KY554768_p174 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 122069 123382
ARM66279.1 KY554768_p152 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 94983 95228
ARM66230.1 KY554768_p103 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57266 57808
ARM66278.1 KY554768_p151 tail component phrog_33 distal tail protein Dit tail -1 94167 94931
ARM66251.1 KY554768_p124 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 71638 71964
ARM66220.1 KY554768_p93 hypothetical protein phrog_9951 unknown function unknown function 1 46260 46697
ARM66196.1 KY554768_p69 hypothetical protein phrog_8350 unknown function unknown function 1 37306 37536
ARM66147.1 KY554768_p20 hypothetical protein phrog_8787 unknown function unknown function 1 9782 10009
ARM66253.1 KY554768_p126 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73004 73249
ARM66262.1 KY554768_p135 hypothetical protein phrog_7920 unknown function unknown function 1 78792 79421
ARM66219.1 KY554768_p92 hypothetical protein phrog_8362 unknown function unknown function 1 45966 46211
ARM66238.1 KY554768_p111 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 62913 63284
ARM66154.1 KY554768_p27 hypothetical protein phrog_121 unknown function unknown function 1 12098 12709
ARM66243.1 KY554768_p116 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66888 67991
ARM66131.1 KY554768_p4 transglycosylase phrog_4602 transglycosylase other 1 4250 4849
ARM66198.1 KY554768_p71 hypothetical protein phrog_1123 unknown function unknown function 1 38104 38403
ARM66190.1 KY554768_p63 hypothetical protein phrog_6344 unknown function unknown function 1 31758 32375
ARM66296.1 KY554768_p169 structural protein phrog_3313 unknown function unknown function -1 115138 116409
ARM66138.1 KY554768_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7272 7523
ARM66188.1 KY554768_p61 hypothetical protein phrog_11669 unknown function unknown function 1 30429 30605
ARM66212.1 KY554768_p85 hypothetical protein phrog_10997 unknown function unknown function 1 42417 42899
ARM66221.1 KY554768_p94 hypothetical protein phrog_6282 unknown function unknown function 1 48468 48983
ARM66206.1 KY554768_p79 hypothetical protein phrog_8756 unknown function unknown function 1 40356 40649
ARM66199.1 KY554768_p72 hypothetical protein phrog_9602 unknown function unknown function 1 38403 38552
ARM66229.1 KY554768_p102 hypothetical protein phrog_8518 unknown function unknown function 1 56910 57266
ARM66293.1 KY554768_p166 hypothetical protein phrog_5329 unknown function unknown function -1 112805 113467
ARM66169.1 KY554768_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20334 20621
ARM66248.1 KY554768_p121 hypothetical protein phrog_8612 unknown function unknown function 1 70574 70795
ARM66276.1 KY554768_p149 tail protein phrog_372 tail protein tail -1 87065 88897
ARM66261.1 KY554768_p134 hypothetical protein phrog_6081 unknown function unknown function 1 78229 78750
ARM66237.1 KY554768_p110 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62681 62920
ARM66136.1 KY554768_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6716 7051
ARM66292.1 KY554768_p165 structural protein phrog_3853 unknown function unknown function -1 112344 112784
ARM66236.1 KY554768_p109 hypothetical protein phrog_8513 unknown function unknown function 1 62366 62617
ARM66266.1 KY554768_p139 hypothetical protein phrog_13224 unknown function unknown function 1 82464 82829
ARM66258.1 KY554768_p131 guanylate kinase phrog_1815 guanylate kinase other 1 75981 76661
ARM66179.1 KY554768_p52 hypothetical protein phrog_5602 unknown function unknown function 1 25005 25148
ARM66217.1 KY554768_p90 hypothetical protein phrog_9087 unknown function unknown function 1 45481 45675
ARM66305.1 KY554768_p178 hypothetical protein phrog_8340 unknown function unknown function -1 124304 124762
ARM66247.1 KY554768_p120 hypothetical protein phrog_9035 unknown function unknown function 1 70431 70577
ARM66222.1 KY554768_p95 hypothetical protein phrog_9039 unknown function unknown function 1 50282 50395
ARM66225.1 KY554768_p98 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53477 54160
ARM66210.1 KY554768_p83 hypothetical protein phrog_8755 unknown function unknown function 1 41950 42213
ARM66182.1 KY554768_p55 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 25869 26468
ARM66208.1 KY554768_p81 hypothetical protein phrog_8664 unknown function unknown function 1 41021 41464
ARM66291.1 KY554768_p164 hypothetical protein phrog_5523 unknown function unknown function -1 112049 112357
ARM66245.1 KY554768_p118 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68496 69413
ARM66233.1 KY554768_p106 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 60086 61375
ARM66228.1 KY554768_p101 hypothetical protein phrog_8616 unknown function unknown function 1 56660 56917
ARM66227.1 KY554768_p100 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54503 56617
ARM66168.1 KY554768_p41 hypothetical protein phrog_11078 unknown function unknown function -1 20073 20276
ARM66137.1 KY554768_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7048 7272
ARM66213.1 KY554768_p86 AAA superfamily ATPase phrog_2376 ATPase other 1 43015 44091
ARM66280.1 KY554768_p153 zinc-ribbon-containing protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95433 96374
ARM66216.1 KY554768_p89 hypothetical protein phrog_9179 unknown function unknown function 1 45055 45438
ARM66240.1 KY554768_p113 HNH protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64300 64962
ARM66176.1 KY554768_p49 hypothetical protein phrog_11294 unknown function unknown function 1 23838 24071
ARM66211.1 KY554768_p84 hypothetical protein phrog_11525 unknown function unknown function 1 42215 42475
ARM66200.1 KY554768_p73 hypothetical protein phrog_6648 unknown function unknown function 1 38752 39024
ARM66151.1 KY554768_p24 glycosyltransferase phrog_7574 unknown function unknown function 1 11015 11524
ARM66201.1 KY554768_p74 hypothetical protein phrog_9207 unknown function unknown function 1 39024 39329
ARM66129.1 KY554768_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1168 3492
ARM66142.1 KY554768_p15 hypothetical protein phrog_12446 unknown function unknown function 1 8812 9027
ARM66254.1 KY554768_p127 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 73780 74058
ARM66215.1 KY554768_p88 hypothetical protein phrog_4997 unknown function unknown function 1 44822 45052
ARM66202.1 KY554768_p75 hypothetical protein phrog_8481 unknown function unknown function 1 39322 39657
ARM66246.1 KY554768_p119 hypothetical protein phrog_9300 unknown function unknown function 1 69477 70223
ARM66285.1 KY554768_p158 hypothetical protein phrog_8692 unknown function unknown function -1 108367 108744
ARM66146.1 KY554768_p19 hypothetical protein phrog_5861 unknown function unknown function 1 9543 9704
ARM66250.1 KY554768_p123 hypothetical protein phrog_8819 unknown function unknown function 1 71202 71558
ARM66297.1 KY554768_p170 structural protein phrog_2739 portal protein head and packaging -1 116421 117962
ARM66303.1 KY554768_p176 hypothetical protein phrog_8012 unknown function unknown function -1 123731 123994
ARM66187.1 KY554768_p60 hypothetical protein phrog_2367 unknown function unknown function 1 29201 30403
ARM66189.1 KY554768_p62 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30606 31652
ARM66256.1 KY554768_p129 hypothetical protein phrog_9040 unknown function unknown function 1 74711 74992
ARM66274.1 KY554768_p147 hypothetical protein phrog_1382 unknown function unknown function -1 86580 86753
ARM66149.1 KY554768_p22 hypothetical protein phrog_3808 unknown function unknown function 1 10415 10663
ARM66264.1 KY554768_p137 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 79845 82016
ARM66184.1 KY554768_p57 hypothetical protein phrog_8387 unknown function unknown function 1 26847 27605
ARM66173.1 KY554768_p46 hypothetical protein phrog_14409 unknown function unknown function 1 22402 22647
ARM66269.1 KY554768_p142 hypothetical protein phrog_9397 unknown function unknown function 1 84360 84692
ARM66165.1 KY554768_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18679 19104
ARM66135.1 KY554768_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6345 6692
ARM66260.1 KY554768_p133 protease phrog_3677 protease other 1 77478 78239
ARM66214.1 KY554768_p87 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44169 44762
ARM66223.1 KY554768_p96 hypothetical protein phrog_1491 tail fiber protein tail 1 50409 51065
ARM66244.1 KY554768_p117 hypothetical protein phrog_8864 unknown function unknown function 1 68004 68414
ARM66159.1 KY554768_p32 hypothetical protein phrog_8431 unknown function unknown function -1 16077 16601
ARM66185.1 KY554768_p58 endolysin phrog_3393 endolysin lysis 1 27711 28745
ARM66249.1 KY554768_p122 hypothetical protein phrog_9195 unknown function unknown function 1 70797 71192
ARM66277.1 KY554768_p150 tail protein phrog_8704 tail protein tail -1 88897 94056
ARM66257.1 KY554768_p130 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 74982 75902
ARM66304.1 KY554768_p177 hypothetical protein phrog_8285 unknown function unknown function -1 123991 124323
ARM66299.1 KY554768_p172 hypothetical protein phrog_3314 unknown function unknown function -1 119686 120714
ARM66133.1 KY554768_p6 transglycosylase phrog_10170 transglycosylase other 1 5703 5822
ARM66150.1 KY554768_p23 hypothetical protein phrog_12279 unknown function unknown function 1 10660 11022
ARM66226.1 KY554768_p99 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54286 54501
ARM66161.1 KY554768_p34 hypothetical protein phrog_5149 unknown function unknown function -1 17448 17684
ARM66265.1 KY554768_p138 hypothetical protein phrog_13495 unknown function unknown function 1 82032 82262
ARM66300.1 KY554768_p173 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 120812 122059
ARM66209.1 KY554768_p82 hypothetical protein phrog_8802 unknown function unknown function 1 41468 41689
ARM66194.1 KY554768_p67 ssDNA exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 35486 37006
ARM66140.1 KY554768_p13 hypothetical protein phrog_8833 unknown function unknown function 1 8133 8477
ARM66239.1 KY554768_p112 ribonucleotide diphosphate reductase subunit aplpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63298 64044
ARM66134.1 KY554768_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5946 6329
ARM66128.1 KY554768_p1 integrase phrog_1 integrase integration and excision 1 140 1159
ARM66195.1 KY554768_p68 hypothetical protein phrog_6484 unknown function unknown function 1 37008 37295
ARM66259.1 KY554768_p132 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 76639 77382
ARM66207.1 KY554768_p80 hypothetical protein phrog_1174 unknown function unknown function 1 40660 40956
ARM66157.1 KY554768_p30 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13402 14085
ARM66290.1 KY554768_p163 structural protein phrog_5251 unknown function unknown function -1 111295 112047
ARM66153.1 KY554768_p26 hypothetical protein phrog_9894 unknown function unknown function 1 11800 11964
ARM66204.1 KY554768_p77 hypothetical protein phrog_8586 unknown function unknown function 1 39891 40130
ARM66284.1 KY554768_p157 hypothetical protein phrog_8587 unknown function unknown function -1 107681 108298
ARM66263.1 KY554768_p136 hypothetical protein phrog_8636 unknown function unknown function 1 79414 79749
ARM66148.1 KY554768_p21 hypothetical protein phrog_289 GTP-binding domain other 1 10027 10404
ARM66298.1 KY554768_p171 protein YonF phrog_2 terminase large subunit head and packaging -1 117986 119683
ARM66224.1 KY554768_p97 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51565 53328
ARM66268.1 KY554768_p141 hypothetical protein phrog_9412 unknown function unknown function 1 84188 84358
ARM66164.1 KY554768_p37 hypothetical protein phrog_8271 unknown function unknown function -1 18317 18640
ARM66255.1 KY554768_p128 hypothetical protein phrog_5083 unknown function unknown function 1 74136 74705
ARM66241.1 KY554768_p114 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 65094 66080
ARM66205.1 KY554768_p78 hypothetical protein phrog_8499 unknown function unknown function 1 40120 40356
ARM66289.1 KY554768_p162 structural protein phrog_6123 virion structural protein head and packaging -1 110690 111301
ARM66191.1 KY554768_p64 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32385 33929
ARM66139.1 KY554768_p12 thymidine kinase phrog_592 thymidine kinase other 1 7556 8152
ARM66231.1 KY554768_p104 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 57810 58469
ARM66294.1 KY554768_p167 structural protein phrog_4088 unknown function unknown function -1 113530 114549
ARM66235.1 KY554768_p108 hypothetical protein phrog_3458 unknown function unknown function 1 62148 62366
ARM66167.1 KY554768_p40 hypothetical protein phrog_11685 unknown function unknown function -1 19477 19677
ARM66183.1 KY554768_p56 hypothetical protein phrog_8553 unknown function unknown function 1 26455 26850
ARM66144.1 KY554768_p17 hypothetical protein phrog_8701 unknown function unknown function 1 9254 9463
ARM66172.1 KY554768_p45 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21865 22356
ARM66186.1 KY554768_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28877 29101
ARM66152.1 KY554768_p25 hypothetical protein phrog_6072 unknown function unknown function 1 11521 11766
ARM66203.1 KY554768_p76 hypothetical protein phrog_10013 unknown function unknown function 1 39739 39918
ARM66242.1 KY554768_p115 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66468 66803
ARM66145.1 KY554768_p18 hypothetical protein phrog_9177 unknown function unknown function 1 9453 9542
ARM66302.1 KY554768_p175 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123366 123734
ARM66180.1 KY554768_p53 hypothetical protein phrog_5462 unknown function unknown function 1 25145 25477
ARM66141.1 KY554768_p14 hypothetical protein phrog_8459 unknown function unknown function 1 8595 8828
ARM66193.1 KY554768_p66 single stranded DNA specific exonuclease singleton unknown function unknown function 1 34993 35400
ARM66282.1 KY554768_p155 integrase/site specific recombinase phrog_1 integrase integration and excision -1 106121 107113
ARM66158.1 KY554768_p31 hypothetical protein phrog_8151 unknown function unknown function 1 14148 14468
ARM66232.1 KY554768_p105 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58548 59801
ARM66288.1 KY554768_p161 hypothetical protein phrog_4051 unknown function unknown function -1 109945 110706
ARM66218.1 KY554768_p91 hypothetical protein phrog_10879 unknown function unknown function 1 45739 45951
ARM66275.1 KY554768_p148 hypothetical protein phrog_6227 unknown function unknown function -1 86762 87049
ARM66174.1 KY554768_p47 hypothetical protein phrog_8325 unknown function unknown function 1 23412 23603
ARM66234.1 KY554768_p107 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61375 61971
ARM66178.1 KY554768_p51 hypothetical protein phrog_8461 unknown function unknown function 1 24652 24906
ARM66175.1 KY554768_p48 Zn-finger protein phrog_9029 unknown function unknown function 1 23698 23841
ARM66171.1 KY554768_p44 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20822 21163
ARM66270.1 KY554768_p143 hypothetical protein phrog_8668 unknown function unknown function 1 84695 85042
ARM66170.1 KY554768_p43 hypothetical protein phrog_8989 unknown function unknown function -1 20634 20750
ARM66162.1 KY554768_p35 hypothetical protein phrog_8376 unknown function unknown function -1 17752 18117
ARM66177.1 KY554768_p50 hypothetical protein phrog_8839 unknown function unknown function 1 24075 24659
ARM66192.1 KY554768_p65 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33940 34989
ARM66130.1 KY554768_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3585 4193
ARM66287.1 KY554768_p160 structural protein phrog_2729 virion structural protein head and packaging -1 109221 109925
ARM66295.1 KY554768_p168 structural protein phrog_4147 unknown function unknown function -1 114588 115109
ARM66156.1 KY554768_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13052 13345
ARM66267.1 KY554768_p140 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 83205 84104
ARM66271.1 KY554768_p144 hypothetical protein phrog_8457 unknown function unknown function 1 85179 85424
ARM66281.1 KY554768_p154 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 96486 106103
ARM66132.1 KY554768_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5111 5710
ARM66283.1 KY554768_p156 structural protein phrog_7299 virion structural protein head and packaging -1 107110 107589
ARM66155.1 KY554768_p28 hypothetical protein phrog_8798 unknown function unknown function 1 12714 13049
ARM66252.1 KY554768_p125 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72061 72759
ARM66272.1 KY554768_p145 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85440 86120
ARM66273.1 KY554768_p146 holin phrog_608 holin lysis -1 86173 86580
ARM66181.1 KY554768_p54 hypothetical protein phrog_9372 unknown function unknown function 1 25548 25790
ARM66163.1 KY554768_p36 hypothetical protein phrog_8724 unknown function unknown function -1 18127 18279
ARM66160.1 KY554768_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16977 17435