Genomic map of Lactococcus phage AM2 (KY554769)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554769
Definition
Lactococcus phage AM2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
125656
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
177
%GC
32.53
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM66459.1 KY554769_p154 integrase/site specific recombinase phrog_1 integrase integration and excision -1 106118 107110
ARM66337.1 KY554769_p32 hypothetical protein phrog_8431 unknown function unknown function -1 16077 16601
ARM66393.1 KY554769_p88 hypothetical protein phrog_9179 unknown function unknown function 1 45048 45431
ARM66433.1 KY554769_p128 hypothetical protein phrog_9040 unknown function unknown function 1 74708 74989
ARM66374.1 KY554769_p69 hypothetical protein phrog_11247 unknown function unknown function 1 37306 37785
ARM66448.1 KY554769_p143 hypothetical protein phrog_8457 unknown function unknown function 1 85176 85421
ARM66388.1 KY554769_p83 hypothetical protein phrog_11525 unknown function unknown function 1 41983 42243
ARM66325.1 KY554769_p20 hypothetical protein phrog_8787 unknown function unknown function 1 9782 10009
ARM66369.1 KY554769_p64 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32385 33929
ARM66411.1 KY554769_p106 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61372 61968
ARM66334.1 KY554769_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13052 13345
ARM66418.1 KY554769_p113 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 65091 66077
ARM66456.1 KY554769_p151 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 94980 95225
ARM66368.1 KY554769_p63 hypothetical protein phrog_6344 unknown function unknown function 1 31758 32375
ARM66427.1 KY554769_p122 hypothetical protein phrog_8819 unknown function unknown function 1 71199 71555
ARM66383.1 KY554769_p78 hypothetical protein phrog_8756 unknown function unknown function 1 40124 40417
ARM66371.1 KY554769_p66 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 34993 36774
ARM66473.1 KY554769_p168 structural protein phrog_3313 unknown function unknown function -1 115135 116406
ARM66453.1 KY554769_p148 tail protein phrog_372 tail protein tail -1 87062 88894
ARM66431.1 KY554769_p126 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 73777 74055
ARM66335.1 KY554769_p30 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13402 14085
ARM66444.1 KY554769_p139 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 83202 84101
ARM66480.1 KY554769_p175 hypothetical protein phrog_8012 unknown function unknown function -1 123728 123991
ARM66463.1 KY554769_p158 hypothetical protein phrog_8442 unknown function unknown function -1 108728 109147
ARM66389.1 KY554769_p84 hypothetical protein phrog_10997 unknown function unknown function 1 42185 42667
ARM66347.1 KY554769_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20334 20621
ARM66311.1 KY554769_p6 transglycosylase phrog_10170 transglycosylase other 1 5703 5822
ARM66382.1 KY554769_p77 hypothetical protein phrog_8499 unknown function unknown function 1 39888 40124
ARM66379.1 KY554769_p74 hypothetical protein phrog_8481 unknown function unknown function 1 39090 39425
ARM66324.1 KY554769_p19 hypothetical protein phrog_5861 unknown function unknown function 1 9543 9704
ARM66345.1 KY554769_p40 hypothetical protein phrog_11685 unknown function unknown function -1 19477 19677
ARM66477.1 KY554769_p172 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 120809 122056
ARM66466.1 KY554769_p161 structural protein phrog_6123 virion structural protein head and packaging -1 110687 111298
ARM66481.1 KY554769_p176 hypothetical protein phrog_8285 unknown function unknown function -1 123988 124320
ARM66363.1 KY554769_p58 endolysin phrog_3393 endolysin lysis 1 27711 28745
ARM66447.1 KY554769_p142 hypothetical protein phrog_8668 unknown function unknown function 1 84692 85039
ARM66430.1 KY554769_p125 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73001 73246
ARM66387.1 KY554769_p82 hypothetical protein phrog_8755 unknown function unknown function 1 41718 41981
ARM66381.1 KY554769_p76 hypothetical protein phrog_8586 unknown function unknown function 1 39659 39898
ARM66380.1 KY554769_p75 hypothetical protein phrog_10013 unknown function unknown function 1 39507 39686
ARM66476.1 KY554769_p171 hypothetical protein phrog_3314 unknown function unknown function -1 119683 120711
ARM66336.1 KY554769_p31 hypothetical protein phrog_8151 unknown function unknown function 1 14148 14468
ARM66319.1 KY554769_p14 hypothetical protein phrog_8459 unknown function unknown function 1 8595 8828
ARM66482.1 KY554769_p177 hypothetical protein phrog_8340 unknown function unknown function -1 124301 124759
ARM66361.1 KY554769_p56 hypothetical protein phrog_8553 unknown function unknown function 1 26455 26850
ARM66353.1 KY554769_p48 Zn-finger protein phrog_9029 unknown function unknown function 1 23698 23841
ARM66356.1 KY554769_p51 hypothetical protein phrog_8461 unknown function unknown function 1 24652 24906
ARM66343.1 KY554769_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18679 19104
ARM66455.1 KY554769_p150 tail component phrog_33 distal tail protein Dit tail -1 94164 94928
ARM66441.1 KY554769_p136 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 79842 82013
ARM66346.1 KY554769_p41 hypothetical protein phrog_11078 unknown function unknown function -1 20073 20276
ARM66316.1 KY554769_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7272 7523
ARM66395.1 KY554769_p90 hypothetical protein phrog_10879 unknown function unknown function 1 45732 45944
ARM66405.1 KY554769_p100 hypothetical protein phrog_8616 unknown function unknown function 1 56657 56914
ARM66370.1 KY554769_p65 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33940 34989
ARM66472.1 KY554769_p167 structural protein phrog_4147 unknown function unknown function -1 114585 115106
ARM66408.1 KY554769_p103 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 57807 58466
ARM66467.1 KY554769_p162 structural protein phrog_5251 unknown function unknown function -1 111292 112044
ARM66332.1 KY554769_p27 hypothetical protein phrog_121 unknown function unknown function 1 12098 12709
ARM66410.1 KY554769_p105 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 60083 61372
ARM66384.1 KY554769_p79 hypothetical protein phrog_1174 unknown function unknown function 1 40428 40724
ARM66398.1 KY554769_p93 hypothetical protein phrog_6282 unknown function unknown function 1 48465 48980
ARM66364.1 KY554769_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28877 29101
ARM66391.1 KY554769_p86 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44162 44755
ARM66342.1 KY554769_p37 hypothetical protein phrog_8271 unknown function unknown function -1 18317 18640
ARM66399.1 KY554769_p94 hypothetical protein phrog_9039 unknown function unknown function 1 50279 50392
ARM66454.1 KY554769_p149 tail protein phrog_8704 tail protein tail -1 88894 94053
ARM66468.1 KY554769_p163 hypothetical protein phrog_5523 unknown function unknown function -1 112046 112354
ARM66320.1 KY554769_p15 hypothetical protein phrog_12446 unknown function unknown function 1 8812 9027
ARM66416.1 KY554769_p111 ribonucleotide diphosphate reductase subunit aplpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63295 64041
ARM66366.1 KY554769_p61 hypothetical protein phrog_11669 unknown function unknown function 1 30429 30605
ARM66458.1 KY554769_p153 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 96483 106100
ARM66326.1 KY554769_p21 hypothetical protein phrog_289 GTP-binding domain other 1 10027 10404
ARM66428.1 KY554769_p123 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 71635 71961
ARM66460.1 KY554769_p155 structural protein phrog_7299 virion structural protein head and packaging -1 107107 107586
ARM66378.1 KY554769_p73 hypothetical protein phrog_9207 unknown function unknown function 1 38792 39097
ARM66471.1 KY554769_p166 structural protein phrog_4088 unknown function unknown function -1 113527 114546
ARM66439.1 KY554769_p134 hypothetical protein phrog_7920 unknown function unknown function 1 78789 79418
ARM66315.1 KY554769_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7048 7272
ARM66449.1 KY554769_p144 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85437 86117
ARM66420.1 KY554769_p115 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66885 67988
ARM66396.1 KY554769_p91 hypothetical protein phrog_8362 unknown function unknown function 1 45959 46204
ARM66321.1 KY554769_p16 hypothetical protein phrog_8095 unknown function unknown function 1 9028 9252
ARM66457.1 KY554769_p152 zinc-ribbon-containing protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95430 96371
ARM66373.1 KY554769_p68 hypothetical protein phrog_8350 unknown function unknown function 1 37074 37304
ARM66464.1 KY554769_p159 structural protein phrog_2729 virion structural protein head and packaging -1 109218 109922
ARM66323.1 KY554769_p18 hypothetical protein phrog_9177 unknown function unknown function 1 9453 9542
ARM66404.1 KY554769_p99 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54500 56614
ARM66421.1 KY554769_p116 hypothetical protein phrog_8864 unknown function unknown function 1 68001 68411
ARM66435.1 KY554769_p130 guanylate kinase phrog_1815 guanylate kinase other 1 75978 76658
ARM66451.1 KY554769_p146 hypothetical protein phrog_1382 unknown function unknown function -1 86577 86750
ARM66367.1 KY554769_p62 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30606 31652
ARM66415.1 KY554769_p110 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 62910 63281
ARM66412.1 KY554769_p107 hypothetical protein phrog_3458 unknown function unknown function 1 62145 62363
ARM66475.1 KY554769_p170 protein YonF phrog_2 terminase large subunit head and packaging -1 117983 119680
ARM66329.1 KY554769_p24 glycosyltransferase phrog_7574 unknown function unknown function 1 11015 11524
ARM66328.1 KY554769_p23 hypothetical protein phrog_12279 unknown function unknown function 1 10660 11022
ARM66465.1 KY554769_p160 hypothetical protein phrog_4051 unknown function unknown function -1 109942 110703
ARM66307.1 KY554769_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1168 3492
ARM66474.1 KY554769_p169 structural protein phrog_2739 portal protein head and packaging -1 116418 117959
ARM66350.1 KY554769_p45 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21865 22356
ARM66400.1 KY554769_p95 hypothetical protein phrog_1491 tail fiber protein tail 1 50406 51062
ARM66461.1 KY554769_p156 hypothetical protein phrog_8587 unknown function unknown function -1 107678 108295
ARM66434.1 KY554769_p129 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 74979 75899
ARM66349.1 KY554769_p44 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20822 21163
ARM66407.1 KY554769_p102 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57263 57805
ARM66386.1 KY554769_p81 hypothetical protein phrog_8802 unknown function unknown function 1 41236 41457
ARM66413.1 KY554769_p108 hypothetical protein phrog_8513 unknown function unknown function 1 62363 62614
ARM66354.1 KY554769_p49 hypothetical protein phrog_11294 unknown function unknown function 1 23838 24071
ARM66306.1 KY554769_p1 integrase phrog_1 integrase integration and excision 1 140 1159
ARM66330.1 KY554769_p25 hypothetical protein phrog_6072 unknown function unknown function 1 11521 11766
ARM66432.1 KY554769_p127 hypothetical protein phrog_5083 unknown function unknown function 1 74133 74702
ARM66392.1 KY554769_p87 hypothetical protein phrog_4997 unknown function unknown function 1 44815 45045
ARM66417.1 KY554769_p112 HNH protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64297 64959
ARM66327.1 KY554769_p22 hypothetical protein phrog_3808 unknown function unknown function 1 10415 10663
ARM66375.1 KY554769_p70 hypothetical protein phrog_1123 unknown function unknown function 1 37872 38171
ARM66443.1 KY554769_p138 hypothetical protein phrog_13224 unknown function unknown function 1 82461 82826
ARM66317.1 KY554769_p12 thymidine kinase phrog_592 thymidine kinase other 1 7556 8152
ARM66308.1 KY554769_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3585 4193
ARM66394.1 KY554769_p89 hypothetical protein phrog_9087 unknown function unknown function 1 45474 45668
ARM66440.1 KY554769_p135 hypothetical protein phrog_8636 unknown function unknown function 1 79411 79746
ARM66450.1 KY554769_p145 holin phrog_608 holin lysis -1 86170 86577
ARM66403.1 KY554769_p98 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54283 54498
ARM66314.1 KY554769_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6716 7051
ARM66479.1 KY554769_p174 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123363 123731
ARM66318.1 KY554769_p13 hypothetical protein phrog_8833 unknown function unknown function 1 8133 8477
ARM66322.1 KY554769_p17 hypothetical protein phrog_8701 unknown function unknown function 1 9254 9463
ARM66429.1 KY554769_p124 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72058 72756
ARM66344.1 KY554769_p39 hypothetical protein phrog_12408 unknown function unknown function -1 19261 19404
ARM66340.1 KY554769_p35 hypothetical protein phrog_8376 unknown function unknown function -1 17752 18117
ARM66452.1 KY554769_p147 hypothetical protein phrog_6227 unknown function unknown function -1 86759 87046
ARM66423.1 KY554769_p118 hypothetical protein phrog_9300 unknown function unknown function 1 69474 70220
ARM66442.1 KY554769_p137 hypothetical protein phrog_13495 unknown function unknown function 1 82029 82259
ARM66331.1 KY554769_p26 hypothetical protein phrog_9894 unknown function unknown function 1 11800 11964
ARM66309.1 KY554769_p4 transglycosylase phrog_4602 transglycosylase other 1 4250 4849
ARM66358.1 KY554769_p53 hypothetical protein phrog_5462 unknown function unknown function 1 25145 25477
ARM66365.1 KY554769_p60 hypothetical protein phrog_2367 unknown function unknown function 1 29201 30403
ARM66414.1 KY554769_p109 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62678 62917
ARM66348.1 KY554769_p43 hypothetical protein phrog_8989 unknown function unknown function -1 20634 20750
ARM66377.1 KY554769_p72 hypothetical protein phrog_6648 unknown function unknown function 1 38520 38792
ARM66357.1 KY554769_p52 hypothetical protein phrog_5602 unknown function unknown function 1 25005 25148
ARM66313.1 KY554769_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6345 6692
ARM66310.1 KY554769_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5111 5710
ARM66312.1 KY554769_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5946 6329
ARM66360.1 KY554769_p55 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 25869 26468
ARM66397.1 KY554769_p92 hypothetical protein phrog_9951 unknown function unknown function 1 46257 46694
ARM66446.1 KY554769_p141 hypothetical protein phrog_9397 unknown function unknown function 1 84357 84689
ARM66424.1 KY554769_p119 hypothetical protein phrog_9035 unknown function unknown function 1 70428 70574
ARM66436.1 KY554769_p131 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 76636 77379
ARM66437.1 KY554769_p132 protease phrog_3677 protease other 1 77475 78236
ARM66422.1 KY554769_p117 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68493 69410
ARM66401.1 KY554769_p96 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51562 53325
ARM66445.1 KY554769_p140 hypothetical protein phrog_9412 unknown function unknown function 1 84185 84355
ARM66469.1 KY554769_p164 structural protein phrog_3853 unknown function unknown function -1 112341 112781
ARM66402.1 KY554769_p97 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53474 54157
ARM66409.1 KY554769_p104 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58545 59798
ARM66385.1 KY554769_p80 hypothetical protein phrog_8664 unknown function unknown function 1 40789 41232
ARM66406.1 KY554769_p101 hypothetical protein phrog_8518 unknown function unknown function 1 56907 57263
ARM66426.1 KY554769_p121 hypothetical protein phrog_9195 unknown function unknown function 1 70794 71189
ARM66478.1 KY554769_p173 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 122066 123379
ARM66355.1 KY554769_p50 hypothetical protein phrog_8839 unknown function unknown function 1 24075 24659
ARM66390.1 KY554769_p85 AAA superfamily ATPase phrog_2376 ATPase other 1 42783 43859
ARM66351.1 KY554769_p46 hypothetical protein phrog_14409 unknown function unknown function 1 22402 22647
ARM66462.1 KY554769_p157 hypothetical protein phrog_8692 unknown function unknown function -1 108364 108741
ARM66470.1 KY554769_p165 hypothetical protein phrog_5329 unknown function unknown function -1 112802 113464
ARM66438.1 KY554769_p133 hypothetical protein phrog_6081 unknown function unknown function 1 78226 78747
ARM66352.1 KY554769_p47 hypothetical protein phrog_8325 unknown function unknown function 1 23412 23603
ARM66372.1 KY554769_p67 hypothetical protein phrog_6484 unknown function unknown function 1 36776 37063
ARM66419.1 KY554769_p114 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66465 66800
ARM66362.1 KY554769_p57 hypothetical protein phrog_8387 unknown function unknown function 1 26847 27605
ARM66333.1 KY554769_p28 hypothetical protein phrog_8798 unknown function unknown function 1 12714 13049
ARM66376.1 KY554769_p71 hypothetical protein phrog_9602 unknown function unknown function 1 38171 38320
ARM66341.1 KY554769_p36 hypothetical protein phrog_8724 unknown function unknown function -1 18127 18279
ARM66425.1 KY554769_p120 hypothetical protein phrog_8612 unknown function unknown function 1 70571 70792
ARM66359.1 KY554769_p54 hypothetical protein phrog_9372 unknown function unknown function 1 25548 25790
ARM66338.1 KY554769_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16977 17435
ARM66339.1 KY554769_p34 hypothetical protein phrog_5149 unknown function unknown function -1 17448 17684