Genomic map of Lactococcus phage AM3 (KY554770)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554770
Definition
Lactococcus phage AM3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
126032
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
177
%GC
32.49
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM66485.1 KY554770_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3586 4194
ARM66506.1 KY554770_p24 glycosyltransferase phrog_7574 unknown function unknown function 1 11016 11525
ARM66554.1 KY554770_p72 hypothetical protein phrog_6648 unknown function unknown function 1 39122 39394
ARM66583.1 KY554770_p101 hypothetical protein phrog_8518 unknown function unknown function 1 57284 57640
ARM66546.1 KY554770_p64 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32987 34531
ARM66632.1 KY554770_p150 tail component phrog_33 distal tail protein Dit tail -1 94541 95305
ARM66560.1 KY554770_p78 hypothetical protein phrog_8756 unknown function unknown function 1 40726 41019
ARM66654.1 KY554770_p172 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 121186 122433
ARM66633.1 KY554770_p151 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 95357 95602
ARM66646.1 KY554770_p164 structural protein phrog_3853 unknown function unknown function -1 112718 113158
ARM66551.1 KY554770_p69 hypothetical protein phrog_11247 unknown function unknown function 1 37908 38387
ARM66651.1 KY554770_p169 structural protein phrog_2739 portal protein head and packaging -1 116795 118336
ARM66623.1 KY554770_p141 hypothetical protein phrog_9397 unknown function unknown function 1 84734 85066
ARM66492.1 KY554770_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7049 7273
ARM66500.1 KY554770_p18 hypothetical protein phrog_9177 unknown function unknown function 1 9454 9543
ARM66655.1 KY554770_p173 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 122443 123756
ARM66517.1 KY554770_p35 hypothetical protein phrog_8376 unknown function unknown function -1 17753 18118
ARM66483.1 KY554770_p1 integrase phrog_1 integrase integration and excision 1 141 1160
ARM66493.1 KY554770_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7273 7524
ARM66513.1 KY554770_p31 hypothetical protein phrog_8151 unknown function unknown function 1 14149 14469
ARM66608.1 KY554770_p126 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 74154 74432
ARM66557.1 KY554770_p75 hypothetical protein phrog_10013 unknown function unknown function 1 40109 40288
ARM66540.1 KY554770_p58 endolysin phrog_3393 endolysin lysis 1 28313 29347
ARM66559.1 KY554770_p77 hypothetical protein phrog_8499 unknown function unknown function 1 40490 40726
ARM66522.1 KY554770_p40 hypothetical protein phrog_11685 unknown function unknown function -1 19479 19679
ARM66599.1 KY554770_p117 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68870 69787
ARM66535.1 KY554770_p53 hypothetical protein phrog_5462 unknown function unknown function 1 25747 26079
ARM66601.1 KY554770_p119 hypothetical protein phrog_9035 unknown function unknown function 1 70805 70951
ARM66509.1 KY554770_p27 hypothetical protein phrog_121 unknown function unknown function 1 12099 12710
ARM66570.1 KY554770_p88 hypothetical protein phrog_9179 unknown function unknown function 1 45425 45808
ARM66512.1 KY554770_p30 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13403 14086
ARM66567.1 KY554770_p85 AAA superfamily ATPase phrog_2376 ATPase other 1 43385 44461
ARM66526.1 KY554770_p44 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20824 21165
ARM66544.1 KY554770_p62 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31208 32254
ARM66498.1 KY554770_p16 hypothetical protein phrog_8095 unknown function unknown function 1 9029 9253
ARM66547.1 KY554770_p65 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 34542 35591
ARM66642.1 KY554770_p160 hypothetical protein phrog_4051 unknown function unknown function -1 110319 111080
ARM66613.1 KY554770_p131 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 77013 77756
ARM66525.1 KY554770_p43 hypothetical protein phrog_8989 unknown function unknown function -1 20636 20752
ARM66503.1 KY554770_p21 hypothetical protein phrog_289 GTP-binding domain other 1 10028 10405
ARM66620.1 KY554770_p138 hypothetical protein phrog_13224 unknown function unknown function 1 82838 83203
ARM66587.1 KY554770_p105 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 60460 61749
ARM66618.1 KY554770_p136 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 80219 82390
ARM66609.1 KY554770_p127 hypothetical protein phrog_5083 unknown function unknown function 1 74510 75079
ARM66648.1 KY554770_p166 structural protein phrog_4088 unknown function unknown function -1 113904 114923
ARM66640.1 KY554770_p158 hypothetical protein phrog_8442 unknown function unknown function -1 109105 109524
ARM66579.1 KY554770_p97 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53851 54534
ARM66502.1 KY554770_p20 hypothetical protein phrog_8787 unknown function unknown function 1 9783 10010
ARM66585.1 KY554770_p103 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 58184 58843
ARM66497.1 KY554770_p15 hypothetical protein phrog_12446 unknown function unknown function 1 8813 9028
ARM66602.1 KY554770_p120 hypothetical protein phrog_8612 unknown function unknown function 1 70948 71169
ARM66626.1 KY554770_p144 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85814 86494
ARM66501.1 KY554770_p19 hypothetical protein phrog_5861 unknown function unknown function 1 9544 9705
ARM66521.1 KY554770_p39 hypothetical protein phrog_12408 unknown function unknown function -1 19263 19406
ARM66594.1 KY554770_p112 HNH protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64674 65336
ARM66656.1 KY554770_p174 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123740 124108
ARM66657.1 KY554770_p175 hypothetical protein phrog_8012 unknown function unknown function -1 124105 124368
ARM66644.1 KY554770_p162 structural protein phrog_5251 unknown function unknown function -1 111669 112421
ARM66573.1 KY554770_p91 hypothetical protein phrog_8362 unknown function unknown function 1 46336 46581
ARM66543.1 KY554770_p61 hypothetical protein phrog_11669 unknown function unknown function 1 31031 31207
ARM66563.1 KY554770_p81 hypothetical protein phrog_8802 unknown function unknown function 1 41838 42059
ARM66494.1 KY554770_p12 thymidine kinase phrog_592 thymidine kinase other 1 7557 8153
ARM66545.1 KY554770_p63 hypothetical protein phrog_6344 unknown function unknown function 1 32360 32977
ARM66555.1 KY554770_p73 hypothetical protein phrog_9207 unknown function unknown function 1 39394 39699
ARM66580.1 KY554770_p98 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54660 54875
ARM66635.1 KY554770_p153 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 96860 106477
ARM66603.1 KY554770_p121 hypothetical protein phrog_9195 unknown function unknown function 1 71171 71566
ARM66638.1 KY554770_p156 hypothetical protein phrog_8587 unknown function unknown function -1 108055 108672
ARM66575.1 KY554770_p93 hypothetical protein phrog_6282 unknown function unknown function 1 48842 49357
ARM66611.1 KY554770_p129 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 75356 76276
ARM66641.1 KY554770_p159 structural protein phrog_2729 virion structural protein head and packaging -1 109595 110299
ARM66616.1 KY554770_p134 hypothetical protein phrog_7920 unknown function unknown function 1 79166 79795
ARM66650.1 KY554770_p168 structural protein phrog_3313 unknown function unknown function -1 115512 116783
ARM66598.1 KY554770_p116 hypothetical protein phrog_8864 unknown function unknown function 1 68378 68788
ARM66658.1 KY554770_p176 hypothetical protein phrog_8285 unknown function unknown function -1 124365 124697
ARM66572.1 KY554770_p90 hypothetical protein phrog_10879 unknown function unknown function 1 46109 46321
ARM66532.1 KY554770_p50 hypothetical protein phrog_8839 unknown function unknown function 1 24677 25261
ARM66582.1 KY554770_p100 hypothetical protein phrog_8616 unknown function unknown function 1 57034 57291
ARM66508.1 KY554770_p26 hypothetical protein phrog_9894 unknown function unknown function 1 11801 11965
ARM66643.1 KY554770_p161 structural protein phrog_6123 virion structural protein head and packaging -1 111064 111675
ARM66515.1 KY554770_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16978 17436
ARM66619.1 KY554770_p137 hypothetical protein phrog_13495 unknown function unknown function 1 82406 82636
ARM66519.1 KY554770_p37 hypothetical protein phrog_8271 unknown function unknown function -1 18319 18642
ARM66558.1 KY554770_p76 hypothetical protein phrog_8586 unknown function unknown function 1 40261 40500
ARM66591.1 KY554770_p109 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 63055 63294
ARM66645.1 KY554770_p163 hypothetical protein phrog_5523 unknown function unknown function -1 112423 112731
ARM66627.1 KY554770_p145 holin phrog_608 holin lysis -1 86547 86954
ARM66516.1 KY554770_p34 hypothetical protein phrog_5149 unknown function unknown function -1 17449 17685
ARM66553.1 KY554770_p71 hypothetical protein phrog_9602 unknown function unknown function 1 38773 38922
ARM66612.1 KY554770_p130 guanylate kinase phrog_1815 guanylate kinase other 1 76355 77035
ARM66617.1 KY554770_p135 hypothetical protein phrog_8636 unknown function unknown function 1 79788 80123
ARM66534.1 KY554770_p52 hypothetical protein phrog_5602 unknown function unknown function 1 25607 25750
ARM66529.1 KY554770_p47 hypothetical protein phrog_8325 unknown function unknown function 1 24014 24205
ARM66584.1 KY554770_p102 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57640 58182
ARM66634.1 KY554770_p152 zinc-ribbon-containing protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95807 96748
ARM66577.1 KY554770_p95 hypothetical protein phrog_1491 tail fiber protein tail 1 50783 51439
ARM66548.1 KY554770_p66 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 35595 37376
ARM66523.1 KY554770_p41 hypothetical protein phrog_11078 unknown function unknown function -1 20075 20278
ARM66490.1 KY554770_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6346 6693
ARM66524.1 KY554770_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20336 20623
ARM66566.1 KY554770_p84 hypothetical protein phrog_10997 unknown function unknown function 1 42787 43269
ARM66597.1 KY554770_p115 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67262 68365
ARM66622.1 KY554770_p140 hypothetical protein phrog_9412 unknown function unknown function 1 84562 84732
ARM66542.1 KY554770_p60 hypothetical protein phrog_2367 unknown function unknown function 1 29803 31005
ARM66518.1 KY554770_p36 hypothetical protein phrog_8724 unknown function unknown function -1 18128 18280
ARM66489.1 KY554770_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5947 6330
ARM66530.1 KY554770_p48 Zn-finger protein phrog_9029 unknown function unknown function 1 24300 24443
ARM66549.1 KY554770_p67 hypothetical protein phrog_6484 unknown function unknown function 1 37378 37665
ARM66576.1 KY554770_p94 hypothetical protein phrog_9039 unknown function unknown function 1 50656 50769
ARM66629.1 KY554770_p147 hypothetical protein phrog_6227 unknown function unknown function -1 87136 87423
ARM66592.1 KY554770_p110 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 63287 63658
ARM66491.1 KY554770_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6717 7052
ARM66562.1 KY554770_p80 hypothetical protein phrog_8664 unknown function unknown function 1 41391 41834
ARM66531.1 KY554770_p49 hypothetical protein phrog_11294 unknown function unknown function 1 24440 24673
ARM66514.1 KY554770_p32 hypothetical protein phrog_8431 unknown function unknown function -1 16078 16602
ARM66564.1 KY554770_p82 hypothetical protein phrog_8755 unknown function unknown function 1 42320 42583
ARM66647.1 KY554770_p165 hypothetical protein phrog_5329 unknown function unknown function -1 113179 113841
ARM66507.1 KY554770_p25 hypothetical protein phrog_6072 unknown function unknown function 1 11522 11767
ARM66625.1 KY554770_p143 hypothetical protein phrog_8457 unknown function unknown function 1 85553 85798
ARM66536.1 KY554770_p54 hypothetical protein phrog_9372 unknown function unknown function 1 26150 26392
ARM66511.1 KY554770_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13053 13346
ARM66486.1 KY554770_p4 transglycosylase phrog_4602 transglycosylase other 1 4251 4850
ARM66487.1 KY554770_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5112 5711
ARM66589.1 KY554770_p107 hypothetical protein phrog_3458 unknown function unknown function 1 62522 62740
ARM66527.1 KY554770_p45 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21867 22358
ARM66636.1 KY554770_p154 integrase/site specific recombinase phrog_1 integrase integration and excision -1 106495 107487
ARM66614.1 KY554770_p132 protease phrog_3677 protease other 1 77852 78613
ARM66571.1 KY554770_p89 hypothetical protein phrog_9087 unknown function unknown function 1 45851 46045
ARM66628.1 KY554770_p146 hypothetical protein phrog_1382 unknown function unknown function -1 86954 87127
ARM66593.1 KY554770_p111 ribonucleotide diphosphate reductase subunit aplpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63672 64418
ARM66605.1 KY554770_p123 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 72012 72338
ARM66615.1 KY554770_p133 hypothetical protein phrog_6081 unknown function unknown function 1 78603 79124
ARM66495.1 KY554770_p13 hypothetical protein phrog_8833 unknown function unknown function 1 8134 8478
ARM66496.1 KY554770_p14 hypothetical protein phrog_8459 unknown function unknown function 1 8596 8829
ARM66528.1 KY554770_p46 hypothetical protein phrog_14409 unknown function unknown function 1 22404 22649
ARM66600.1 KY554770_p118 hypothetical protein phrog_9300 unknown function unknown function 1 69851 70597
ARM66537.1 KY554770_p55 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 26471 27070
ARM66630.1 KY554770_p148 tail protein phrog_372 tail protein tail -1 87439 89271
ARM66520.1 KY554770_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18681 19106
ARM66569.1 KY554770_p87 hypothetical protein phrog_4997 unknown function unknown function 1 45192 45422
ARM66637.1 KY554770_p155 structural protein phrog_7299 virion structural protein head and packaging -1 107484 107963
ARM66561.1 KY554770_p79 hypothetical protein phrog_1174 unknown function unknown function 1 41030 41326
ARM66541.1 KY554770_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 29479 29703
ARM66606.1 KY554770_p124 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72435 73133
ARM66649.1 KY554770_p167 structural protein phrog_4147 unknown function unknown function -1 114962 115483
ARM66565.1 KY554770_p83 hypothetical protein phrog_11525 unknown function unknown function 1 42585 42845
ARM66504.1 KY554770_p22 hypothetical protein phrog_3808 unknown function unknown function 1 10416 10664
ARM66596.1 KY554770_p114 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66842 67177
ARM66639.1 KY554770_p157 hypothetical protein phrog_8692 unknown function unknown function -1 108741 109118
ARM66586.1 KY554770_p104 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58922 60175
ARM66624.1 KY554770_p142 hypothetical protein phrog_8668 unknown function unknown function 1 85069 85416
ARM66659.1 KY554770_p177 hypothetical protein phrog_8340 unknown function unknown function -1 124678 125136
ARM66488.1 KY554770_p6 transglycosylase phrog_10170 transglycosylase other 1 5704 5823
ARM66631.1 KY554770_p149 tail protein phrog_8704 tail protein tail -1 89271 94430
ARM66568.1 KY554770_p86 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44539 45132
ARM66550.1 KY554770_p68 hypothetical protein phrog_8350 unknown function unknown function 1 37676 37906
ARM66604.1 KY554770_p122 hypothetical protein phrog_8819 unknown function unknown function 1 71576 71932
ARM66590.1 KY554770_p108 hypothetical protein phrog_8513 unknown function unknown function 1 62740 62991
ARM66595.1 KY554770_p113 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 65468 66454
ARM66653.1 KY554770_p171 hypothetical protein phrog_3314 unknown function unknown function -1 120060 121088
ARM66578.1 KY554770_p96 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51939 53702
ARM66510.1 KY554770_p28 hypothetical protein phrog_8798 unknown function unknown function 1 12715 13050
ARM66499.1 KY554770_p17 hypothetical protein phrog_8701 unknown function unknown function 1 9255 9464
ARM66538.1 KY554770_p56 hypothetical protein phrog_8553 unknown function unknown function 1 27057 27452
ARM66588.1 KY554770_p106 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61749 62345
ARM66539.1 KY554770_p57 hypothetical protein phrog_8387 unknown function unknown function 1 27449 28207
ARM66505.1 KY554770_p23 hypothetical protein phrog_12279 unknown function unknown function 1 10661 11023
ARM66556.1 KY554770_p74 hypothetical protein phrog_8481 unknown function unknown function 1 39692 40027
ARM66621.1 KY554770_p139 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 83579 84478
ARM66607.1 KY554770_p125 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73378 73623
ARM66581.1 KY554770_p99 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54877 56991
ARM66552.1 KY554770_p70 hypothetical protein phrog_1123 unknown function unknown function 1 38474 38773
ARM66533.1 KY554770_p51 hypothetical protein phrog_8461 unknown function unknown function 1 25254 25508
ARM66652.1 KY554770_p170 protein YonF phrog_2 terminase large subunit head and packaging -1 118360 120057
ARM66484.1 KY554770_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1169 3493
ARM66574.1 KY554770_p92 hypothetical protein phrog_9951 unknown function unknown function 1 46634 47071
ARM66610.1 KY554770_p128 hypothetical protein phrog_9040 unknown function unknown function 1 75085 75366