Genomic map of Lactococcus phage AM5 (KY554772)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554772
Definition
Lactococcus phage AM5, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
128178
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
182
%GC
32.55
Number of singletons
0
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM66981.1 KY554772_p128 hypothetical protein phrog_8819 unknown function unknown function 1 72927 73283
ARM66972.1 KY554772_p119 GIY-YIG homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 67541 68254
ARM67000.1 KY554772_p147 hypothetical protein phrog_8457 unknown function unknown function 1 86047 86292
ARM67035.1 KY554772_p182 hypothetical protein phrog_8340 unknown function unknown function -1 126744 127211
ARM66970.1 KY554772_p117 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 65868 66239
ARM66974.1 KY554772_p121 hypothetical protein phrog_8864 unknown function unknown function 1 69523 69933
ARM66968.1 KY554772_p115 hypothetical protein phrog_8513 unknown function unknown function 1 65321 65572
ARM66887.1 KY554772_p34 hypothetical protein phrog_8151 unknown function unknown function 1 14831 15151
ARM67028.1 KY554772_p175 protein YonF phrog_2 terminase large subunit head and packaging -1 120426 122123
ARM66857.1 KY554772_p4 transglycosylase phrog_4602 transglycosylase other 1 4264 4863
ARM66946.1 KY554772_p93 hypothetical protein phrog_8755 unknown function unknown function 1 45804 46067
ARM66884.1 KY554772_p31 hypothetical protein phrog_8798 unknown function unknown function 1 13956 14291
ARM66999.1 KY554772_p146 hypothetical protein phrog_8668 unknown function unknown function 1 85560 85910
ARM66925.1 KY554772_p72 hypothetical protein phrog_30722 unknown function unknown function 1 40082 40177
ARM66935.1 KY554772_p82 hypothetical protein phrog_3002 unknown function unknown function 1 42624 42893
ARM66956.1 KY554772_p103 hypothetical protein phrog_1491 tail fiber protein tail 1 52332 52988
ARM67031.1 KY554772_p178 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 124509 125822
ARM66934.1 KY554772_p81 hypothetical protein phrog_18583 unknown function unknown function 1 42213 42533
ARM66973.1 KY554772_p120 ribonucleotide diphosphate reductase subunit aplpha phrog_3844 NrdA-like aerobic NDP reductase large subunit moron, auxiliary metabolic gene and host takeover 1 68470 69510
ARM66889.1 KY554772_p36 hypothetical protein phrog_8573 unknown function unknown function -1 17563 17877
ARM66924.1 KY554772_p71 hypothetical protein phrog_5105 unknown function unknown function 1 39522 40061
ARM66910.1 KY554772_p57 hypothetical protein phrog_1905 unknown function unknown function 1 26290 26724
ARM67008.1 KY554772_p155 hypothetical protein phrog_3267 tail protein tail -1 92451 93572
ARM67033.1 KY554772_p180 hypothetical protein phrog_8012 unknown function unknown function -1 126171 126434
ARM66964.1 KY554772_p111 anaerobic ribonucleoside triphosphate reductase phrog_26446 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 60994 63279
ARM66901.1 KY554772_p48 hypothetical protein phrog_24136 unknown function unknown function -1 21911 22285
ARM66936.1 KY554772_p83 hypothetical protein phrog_23614 unknown function unknown function 1 42890 43123
ARM66914.1 KY554772_p61 hypothetical protein phrog_8553 unknown function unknown function 1 28207 28602
ARM66888.1 KY554772_p35 hypothetical protein phrog_8431 unknown function unknown function -1 16634 17092
ARM66908.1 KY554772_p55 hypothetical protein phrog_17000 unknown function unknown function 1 25626 26012
ARM66975.1 KY554772_p122 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 70015 71136
ARM66977.1 KY554772_p124 hypothetical protein phrog_35321 unknown function unknown function 1 71684 71947
ARM66929.1 KY554772_p76 hypothetical protein phrog_9602 unknown function unknown function 1 40926 41069
ARM66948.1 KY554772_p95 AAA superfamily ATPase phrog_2376 ATPase other 1 46610 47686
ARM67027.1 KY554772_p174 structural protein phrog_2739 portal protein head and packaging -1 118861 120402
ARM66869.1 KY554772_p16 hypothetical protein phrog_16271 unknown function unknown function 1 9222 9467
ARM66862.1 KY554772_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6729 7064
ARM66879.1 KY554772_p26 hypothetical protein phrog_4000 unknown function unknown function 1 11815 12084
ARM67030.1 KY554772_p177 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 123252 124499
ARM67003.1 KY554772_p150 hypothetical protein phrog_1382 unknown function unknown function -1 87465 87623
ARM67013.1 KY554772_p160 structural protein phrog_7299 virion structural protein head and packaging -1 109558 110040
ARM66944.1 KY554772_p91 hypothetical protein phrog_8802 unknown function unknown function 1 45089 45274
ARM66885.1 KY554772_p32 hypothetical protein phrog_28717 unknown function unknown function 1 14293 14508
ARM66962.1 KY554772_p109 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 58722 59381
ARM67002.1 KY554772_p149 holin phrog_608 holin lysis -1 87042 87449
ARM66921.1 KY554772_p68 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 35129 36673
ARM66991.1 KY554772_p138 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 78649 79392
ARM66993.1 KY554772_p140 hypothetical protein phrog_6081 unknown function unknown function 1 80238 80759
ARM66878.1 KY554772_p25 hypothetical protein phrog_17274 unknown function unknown function 1 11654 11818
ARM66872.1 KY554772_p19 hypothetical protein phrog_8701 unknown function unknown function 1 10143 10352
ARM66912.1 KY554772_p59 hypothetical protein phrog_9372 unknown function unknown function 1 27300 27542
ARM66938.1 KY554772_p85 hypothetical protein phrog_4188 unknown function unknown function 1 43303 43455
ARM66942.1 KY554772_p89 hypothetical protein phrog_8756 unknown function unknown function 1 44388 44681
ARM66863.1 KY554772_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7061 7285
ARM66920.1 KY554772_p67 hypothetical protein phrog_6344 unknown function unknown function 1 34502 35119
ARM66949.1 KY554772_p96 hypothetical protein phrog_4997 unknown function unknown function 1 47836 48066
ARM66871.1 KY554772_p18 hypothetical protein phrog_8095 unknown function unknown function 1 9917 10141
ARM66960.1 KY554772_p107 hypothetical protein phrog_8518 unknown function unknown function 1 57855 58211
ARM66886.1 KY554772_p33 hypothetical protein phrog_8622 unknown function unknown function 1 14505 14828
ARM67017.1 KY554772_p164 structural protein phrog_2729 virion structural protein head and packaging -1 111673 112377
ARM66856.1 KY554772_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3587 4204
ARM67025.1 KY554772_p172 structural protein phrog_4147 unknown function unknown function -1 117040 117561
ARM66858.1 KY554772_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5125 5724
ARM66915.1 KY554772_p62 hypothetical protein phrog_8387 unknown function unknown function 1 28599 29357
ARM66980.1 KY554772_p127 hypothetical protein phrog_9195 unknown function unknown function 1 72521 72916
ARM66918.1 KY554772_p65 hypothetical protein phrog_2367 unknown function unknown function 1 31034 32239
ARM66995.1 KY554772_p142 hypothetical protein phrog_8636 unknown function unknown function 1 81424 81759
ARM66976.1 KY554772_p123 hypothetical protein phrog_9300 unknown function unknown function 1 71200 71661
ARM66895.1 KY554772_p42 hypothetical protein phrog_8271 unknown function unknown function -1 19736 20059
ARM66899.1 KY554772_p46 hypothetical protein phrog_9313 unknown function unknown function -1 21359 21646
ARM66931.1 KY554772_p78 hypothetical protein phrog_21629 unknown function unknown function 1 41313 41690
ARM66994.1 KY554772_p141 hypothetical protein phrog_7920 unknown function unknown function 1 80802 81431
ARM66998.1 KY554772_p145 hypothetical protein phrog_17864 unknown function unknown function 1 85273 85548
ARM66951.1 KY554772_p98 hypothetical protein phrog_9087 unknown function unknown function 1 48501 48695
ARM66897.1 KY554772_p44 hypothetical protein phrog_29744 unknown function unknown function -1 20470 20658
ARM66971.1 KY554772_p118 ribonucleotide diphosphate reductase subunit aplpha phrog_3987 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 66253 67416
ARM67015.1 KY554772_p162 hypothetical protein phrog_8692 unknown function unknown function -1 110818 111195
ARM66865.1 KY554772_p12 YgiT family zinc finger/helix-turn-helix protein phrog_18401 unknown function unknown function 1 7552 7923
ARM66864.1 KY554772_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7285 7536
ARM66996.1 KY554772_p143 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 81855 85016
ARM67016.1 KY554772_p163 hypothetical protein phrog_8442 unknown function unknown function -1 111182 111601
ARM66926.1 KY554772_p73 hypothetical protein phrog_1123 unknown function unknown function 1 40213 40515
ARM67009.1 KY554772_p156 tail protein phrog_8704 tail protein tail -1 93588 97784
ARM66867.1 KY554772_p14 hypothetical protein phrog_8833 unknown function unknown function 1 8543 8887
ARM66969.1 KY554772_p116 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 65636 65875
ARM66958.1 KY554772_p105 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 55448 57562
ARM67024.1 KY554772_p171 structural protein phrog_4088 unknown function unknown function -1 115982 117001
ARM66893.1 KY554772_p40 hypothetical protein phrog_8376 unknown function unknown function -1 19181 19546
ARM66882.1 KY554772_p29 hypothetical protein phrog_13719 unknown function unknown function 1 12939 13154
ARM66986.1 KY554772_p133 hypothetical protein phrog_5083 unknown function unknown function 1 75861 76430
ARM66961.1 KY554772_p108 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 58211 58729
ARM66883.1 KY554772_p30 hypothetical protein phrog_121 unknown function unknown function 1 13151 13750
ARM66913.1 KY554772_p60 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 27621 28220
ARM66953.1 KY554772_p100 hypothetical protein phrog_8362 unknown function unknown function 1 49216 49461
ARM67022.1 KY554772_p169 structural protein phrog_3853 unknown function unknown function -1 114796 115236
ARM66855.1 KY554772_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1169 3490
ARM66923.1 KY554772_p70 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 37737 39518
ARM66894.1 KY554772_p41 hypothetical protein phrog_8724 unknown function unknown function -1 19556 19702
ARM66989.1 KY554772_p136 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 76996 77910
ARM66985.1 KY554772_p132 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 75553 75783
ARM66950.1 KY554772_p97 hypothetical protein phrog_9179 unknown function unknown function 1 48069 48458
ARM67020.1 KY554772_p167 structural protein phrog_5251 unknown function unknown function -1 113747 114499
ARM66928.1 KY554772_p75 hypothetical protein phrog_16758 unknown function unknown function 1 40747 40929
ARM66868.1 KY554772_p15 hypothetical protein phrog_8459 unknown function unknown function 1 9005 9238
ARM66947.1 KY554772_p94 hypothetical protein phrog_10997 unknown function unknown function 1 46069 46494
ARM67004.1 KY554772_p151 hypothetical protein phrog_6227 unknown function unknown function -1 87627 87917
ARM66873.1 KY554772_p20 hypothetical protein phrog_9177 unknown function unknown function 1 10342 10431
ARM66916.1 KY554772_p63 endolysin phrog_3393 endolysin lysis 1 29463 30509
ARM67012.1 KY554772_p159 integrase/site specific recombinase phrog_1 integrase integration and excision -1 108569 109561
ARM66876.1 KY554772_p23 hypothetical protein phrog_8787 unknown function unknown function 1 11166 11390
ARM66919.1 KY554772_p66 AAA domain-containing protein phrog_19299 terminase large subunit head and packaging 1 32288 34396
ARM66866.1 KY554772_p13 thymidine kinase phrog_592 thymidine kinase other 1 7966 8562
ARM66898.1 KY554772_p45 hypothetical protein phrog_36714 unknown function unknown function -1 21096 21296
ARM66932.1 KY554772_p79 hypothetical protein phrog_27993 unknown function unknown function 1 41687 41995
ARM66959.1 KY554772_p106 hypothetical protein phrog_8616 unknown function unknown function 1 57605 57862
ARM66965.1 KY554772_p112 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 63279 63875
ARM66854.1 KY554772_p1 integrase phrog_1 integrase integration and excision 1 141 1160
ARM67006.1 KY554772_p153 tail protein phrog_10693 host range and adsorption protein moron, auxiliary metabolic gene and host takeover -1 89766 92300
ARM66891.1 KY554772_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18332 18763
ARM66955.1 KY554772_p102 hypothetical protein phrog_9039 unknown function unknown function 1 52211 52318
ARM66943.1 KY554772_p90 hypothetical protein phrog_1174 unknown function unknown function 1 44692 44988
ARM66990.1 KY554772_p137 guanylate kinase phrog_1815 guanylate kinase other 1 77991 78671
ARM66987.1 KY554772_p134 hypothetical protein phrog_21230 unknown function unknown function 1 76436 76705
ARM66922.1 KY554772_p69 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 36684 37733
ARM66860.1 KY554772_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5959 6342
ARM66874.1 KY554772_p21 hypothetical protein phrog_3530 unknown function unknown function 1 10487 10930
ARM66892.1 KY554772_p39 hypothetical protein phrog_29432 unknown function unknown function -1 18778 19116
ARM66907.1 KY554772_p54 hypothetical protein phrog_8461 unknown function unknown function 1 25372 25626
ARM66877.1 KY554772_p24 hypothetical protein phrog_3808 unknown function unknown function 1 11409 11657
ARM66979.1 KY554772_p126 hypothetical protein phrog_8612 unknown function unknown function 1 72298 72519
ARM66930.1 KY554772_p77 hypothetical protein phrog_20409 unknown function unknown function 1 41083 41313
ARM66988.1 KY554772_p135 hypothetical protein phrog_9040 unknown function unknown function 1 76731 77006
ARM66890.1 KY554772_p37 hypothetical protein phrog_30749 unknown function unknown function -1 18032 18235
ARM66937.1 KY554772_p84 hypothetical protein phrog_2670 unknown function unknown function 1 43120 43302
ARM66905.1 KY554772_p52 hypothetical protein phrog_9894 unknown function unknown function 1 24787 24948
ARM67032.1 KY554772_p179 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 125806 126174
ARM66927.1 KY554772_p74 hypothetical protein phrog_3808 unknown function unknown function 1 40512 40757
ARM66859.1 KY554772_p6 transglycosylase phrog_10170 transglycosylase other 1 5717 5836
ARM67001.1 KY554772_p148 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 86308 86988
ARM67014.1 KY554772_p161 hypothetical protein phrog_8587 unknown function unknown function -1 110132 110749
ARM67005.1 KY554772_p152 tail protein phrog_372 tail protein tail -1 87934 89766
ARM66896.1 KY554772_p43 hypothetical protein phrog_38509 unknown function unknown function -1 20130 20330
ARM66945.1 KY554772_p92 hypothetical protein phrog_28684 unknown function unknown function 1 45277 45495
ARM66861.1 KY554772_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6358 6705
ARM66902.1 KY554772_p49 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22979 23491
ARM66911.1 KY554772_p58 hypothetical protein phrog_18439 unknown function unknown function 1 26734 27096
ARM66941.1 KY554772_p88 hypothetical protein phrog_8499 unknown function unknown function 1 44152 44388
ARM66963.1 KY554772_p110 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 59460 60713
ARM66967.1 KY554772_p114 hypothetical protein phrog_3458 unknown function unknown function 1 65106 65321
ARM67007.1 KY554772_p154 helicase subunit of the DNA excision repair complex phrog_7926 helicase subunit of the DNA excision repair complex DNA, RNA and nucleotide metabolism -1 92278 92451
ARM67019.1 KY554772_p166 structural protein phrog_6123 virion structural protein head and packaging -1 113142 113747
ARM67011.1 KY554772_p158 minor tail protein phrog_4211 tail length tape measure protein tail -1 98709 108551
ARM66966.1 KY554772_p113 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63952 65052
ARM66954.1 KY554772_p101 hypothetical protein phrog_6282 unknown function unknown function 1 51030 51545
ARM67023.1 KY554772_p170 hypothetical protein phrog_5329 unknown function unknown function -1 115257 115919
ARM66900.1 KY554772_p47 hypothetical protein phrog_8989 unknown function unknown function -1 21659 21775
ARM66903.1 KY554772_p50 hypothetical protein phrog_8325 unknown function unknown function 1 24360 24554
ARM66957.1 KY554772_p104 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 53491 55446
ARM67018.1 KY554772_p165 hypothetical protein phrog_4051 unknown function unknown function -1 112397 113158
ARM66939.1 KY554772_p86 hypothetical protein phrog_8481 unknown function unknown function 1 43488 43823
ARM66875.1 KY554772_p22 hypothetical protein phrog_5861 unknown function unknown function 1 10927 11088
ARM66917.1 KY554772_p64 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 30711 30935
ARM66933.1 KY554772_p80 hypothetical protein phrog_35269 unknown function unknown function 1 42005 42235
ARM66906.1 KY554772_p53 hypothetical protein phrog_11294 unknown function unknown function 1 25122 25379
ARM66997.1 KY554772_p144 hypothetical protein phrog_9412 unknown function unknown function 1 85101 85283
ARM66982.1 KY554772_p129 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 73363 73689
ARM66978.1 KY554772_p125 hypothetical protein phrog_9035 unknown function unknown function 1 72155 72301
ARM66904.1 KY554772_p51 Zn-finger protein phrog_9029 unknown function unknown function 1 24647 24790
ARM66940.1 KY554772_p87 hypothetical protein phrog_8586 unknown function unknown function 1 43905 44162
ARM66881.1 KY554772_p28 hypothetical protein phrog_30646 unknown function unknown function 1 12436 12942
ARM66992.1 KY554772_p139 protease phrog_3677 protease other 1 79487 80248
ARM67010.1 KY554772_p157 tail component phrog_33 distal tail protein Dit tail -1 97892 98656
ARM67034.1 KY554772_p181 hypothetical protein phrog_8285 unknown function unknown function -1 126431 126763
ARM66909.1 KY554772_p56 hypothetical protein phrog_20816 unknown function unknown function 1 26090 26293
ARM66952.1 KY554772_p99 hypothetical protein phrog_9951 unknown function unknown function 1 48759 49184
ARM66880.1 KY554772_p27 glycosyltransferase phrog_3808 unknown function unknown function 1 12077 12439
ARM66983.1 KY554772_p130 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 73786 74484
ARM67021.1 KY554772_p168 hypothetical protein phrog_5523 unknown function unknown function -1 114501 114809
ARM67026.1 KY554772_p173 structural protein phrog_3313 unknown function unknown function -1 117590 118849
ARM66870.1 KY554772_p17 hypothetical protein phrog_18545 unknown function unknown function 1 9464 9916
ARM66984.1 KY554772_p131 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 74729 74974
ARM67029.1 KY554772_p176 hypothetical protein phrog_3314 unknown function unknown function -1 122126 123154