Genomic map of Lactococcus phage AM9 (KY554774)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554774
Definition
Lactococcus phage AM9, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
125294
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
179
%GC
32.53
Number of singletons
3
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM67367.1 KY554774_p154 tail tape measure protein singleton unknown function unknown function -1 96257 98905
ARM67379.1 KY554774_p166 structural protein phrog_3853 unknown function unknown function -1 111979 112419
ARM67303.1 KY554774_p90 hypothetical protein phrog_9087 unknown function unknown function 1 45248 45442
ARM67313.1 KY554774_p100 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54274 56388
ARM67351.1 KY554774_p138 hypothetical protein phrog_13495 unknown function unknown function 1 81803 82033
ARM67322.1 KY554774_p109 hypothetical protein phrog_8513 unknown function unknown function 1 62137 62388
ARM67344.1 KY554774_p131 guanylate kinase phrog_1815 guanylate kinase other 1 75752 76432
ARM67331.1 KY554774_p118 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68267 69184
ARM67274.1 KY554774_p61 hypothetical protein phrog_2367 unknown function unknown function 1 29200 30402
ARM67294.1 KY554774_p81 hypothetical protein phrog_8664 unknown function unknown function 1 40788 41231
ARM67290.1 KY554774_p77 hypothetical protein phrog_8586 unknown function unknown function 1 39658 39897
ARM67338.1 KY554774_p125 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 71832 72530
ARM67244.1 KY554774_p31 hypothetical protein phrog_8151 unknown function unknown function 1 14148 14468
ARM67252.1 KY554774_p39 hypothetical protein phrog_12408 unknown function unknown function -1 19261 19404
ARM67268.1 KY554774_p55 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 25869 26468
ARM67248.1 KY554774_p35 hypothetical protein phrog_8376 unknown function unknown function -1 17752 18117
ARM67329.1 KY554774_p116 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66659 67762
ARM67345.1 KY554774_p132 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 76410 77153
ARM67389.1 KY554774_p176 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123001 123369
ARM67354.1 KY554774_p141 hypothetical protein phrog_9412 unknown function unknown function 1 83959 84129
ARM67390.1 KY554774_p177 hypothetical protein phrog_8012 unknown function unknown function -1 123366 123629
ARM67307.1 KY554774_p94 hypothetical protein phrog_6282 unknown function unknown function 1 48239 48754
ARM67334.1 KY554774_p121 hypothetical protein phrog_8612 unknown function unknown function 1 70345 70566
ARM67218.1 KY554774_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5111 5710
ARM67346.1 KY554774_p133 protease phrog_3677 protease other 1 77249 78010
ARM67249.1 KY554774_p36 hypothetical protein phrog_8724 unknown function unknown function -1 18127 18279
ARM67358.1 KY554774_p145 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85211 85891
ARM67262.1 KY554774_p49 hypothetical protein phrog_11294 unknown function unknown function 1 23838 24071
ARM67347.1 KY554774_p134 hypothetical protein phrog_6081 unknown function unknown function 1 78000 78521
ARM67259.1 KY554774_p46 hypothetical protein phrog_14409 unknown function unknown function 1 22402 22647
ARM67234.1 KY554774_p21 hypothetical protein phrog_289 GTP-binding domain other 1 10027 10404
ARM67369.1 KY554774_p156 integrase/site specific recombinase phrog_1 integrase integration and excision -1 105756 106748
ARM67310.1 KY554774_p97 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51336 53099
ARM67387.1 KY554774_p174 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 120447 121694
ARM67364.1 KY554774_p151 tail component phrog_33 distal tail protein Dit tail -1 93938 94702
ARM67342.1 KY554774_p129 hypothetical protein phrog_9040 unknown function unknown function 1 74482 74763
ARM67284.1 KY554774_p71 hypothetical protein phrog_1123 unknown function unknown function 1 37871 38170
ARM67305.1 KY554774_p92 hypothetical protein phrog_8362 unknown function unknown function 1 45733 45978
ARM67266.1 KY554774_p53 hypothetical protein phrog_5462 unknown function unknown function 1 25145 25477
ARM67228.1 KY554774_p15 hypothetical protein phrog_12446 unknown function unknown function 1 8812 9027
ARM67246.1 KY554774_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16977 17435
ARM67271.1 KY554774_p58 endolysin singleton unknown function unknown function 1 27711 28226
ARM67296.1 KY554774_p83 hypothetical protein phrog_8755 unknown function unknown function 1 41717 41980
ARM67270.1 KY554774_p57 hypothetical protein phrog_8387 unknown function unknown function 1 26847 27605
ARM67240.1 KY554774_p27 hypothetical protein phrog_121 unknown function unknown function 1 12098 12709
ARM67301.1 KY554774_p88 hypothetical protein phrog_4997 unknown function unknown function 1 44589 44819
ARM67372.1 KY554774_p159 hypothetical protein phrog_8692 unknown function unknown function -1 108002 108379
ARM67373.1 KY554774_p160 hypothetical protein phrog_8442 unknown function unknown function -1 108366 108785
ARM67257.1 KY554774_p44 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20822 21163
ARM67350.1 KY554774_p137 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 79616 81787
ARM67356.1 KY554774_p143 hypothetical protein phrog_8668 unknown function unknown function 1 84466 84813
ARM67214.1 KY554774_p1 integrase phrog_1 integrase integration and excision 1 140 1159
ARM67269.1 KY554774_p56 hypothetical protein phrog_8553 unknown function unknown function 1 26455 26850
ARM67299.1 KY554774_p86 AAA superfamily ATPase phrog_2376 ATPase other 1 42782 43858
ARM67256.1 KY554774_p43 hypothetical protein phrog_8989 unknown function unknown function -1 20634 20750
ARM67365.1 KY554774_p152 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 94754 94999
ARM67223.1 KY554774_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7048 7272
ARM67293.1 KY554774_p80 hypothetical protein phrog_1174 unknown function unknown function 1 40427 40723
ARM67355.1 KY554774_p142 hypothetical protein phrog_9397 unknown function unknown function 1 84131 84463
ARM67385.1 KY554774_p172 protein YonF phrog_2 terminase large subunit head and packaging -1 117621 119318
ARM67254.1 KY554774_p41 hypothetical protein phrog_11078 unknown function unknown function -1 20073 20276
ARM67323.1 KY554774_p110 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62452 62691
ARM67312.1 KY554774_p99 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54057 54272
ARM67275.1 KY554774_p62 hypothetical protein phrog_11669 unknown function unknown function 1 30428 30604
ARM67340.1 KY554774_p127 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 73551 73829
ARM67216.1 KY554774_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3585 4193
ARM67250.1 KY554774_p37 hypothetical protein phrog_8271 unknown function unknown function -1 18317 18640
ARM67231.1 KY554774_p18 hypothetical protein phrog_9177 unknown function unknown function 1 9453 9542
ARM67326.1 KY554774_p113 hypothetical protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64071 64733
ARM67316.1 KY554774_p103 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57037 57579
ARM67361.1 KY554774_p148 hypothetical protein phrog_6227 unknown function unknown function -1 86533 86820
ARM67264.1 KY554774_p51 hypothetical protein phrog_8461 unknown function unknown function 1 24652 24906
ARM67283.1 KY554774_p70 hypothetical protein phrog_11247 unknown function unknown function 1 37305 37784
ARM67336.1 KY554774_p123 hypothetical protein phrog_8819 unknown function unknown function 1 70973 71329
ARM67229.1 KY554774_p16 hypothetical protein phrog_8095 unknown function unknown function 1 9028 9252
ARM67247.1 KY554774_p34 hypothetical protein phrog_5149 unknown function unknown function -1 17448 17684
ARM67219.1 KY554774_p6 hypothetical protein phrog_10170 transglycosylase other 1 5703 5822
ARM67220.1 KY554774_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5946 6329
ARM67392.1 KY554774_p179 hypothetical protein phrog_8340 unknown function unknown function -1 123939 124397
ARM67238.1 KY554774_p25 hypothetical protein phrog_6072 unknown function unknown function 1 11521 11766
ARM67320.1 KY554774_p107 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61146 61742
ARM67224.1 KY554774_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7272 7523
ARM67335.1 KY554774_p122 hypothetical protein phrog_9195 unknown function unknown function 1 70568 70963
ARM67241.1 KY554774_p28 hypothetical protein phrog_8798 unknown function unknown function 1 12714 13049
ARM67292.1 KY554774_p79 hypothetical protein phrog_8756 unknown function unknown function 1 40123 40416
ARM67258.1 KY554774_p45 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21865 22356
ARM67319.1 KY554774_p106 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 59857 61146
ARM67391.1 KY554774_p178 hypothetical protein phrog_8285 unknown function unknown function -1 123626 123958
ARM67309.1 KY554774_p96 hypothetical protein phrog_1491 tail fiber protein tail 1 50180 50836
ARM67371.1 KY554774_p158 hypothetical protein phrog_8587 unknown function unknown function -1 107316 107933
ARM67343.1 KY554774_p130 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 74753 75673
ARM67239.1 KY554774_p26 hypothetical protein phrog_9894 unknown function unknown function 1 11800 11964
ARM67217.1 KY554774_p4 transglycosylase phrog_4602 transglycosylase other 1 4250 4849
ARM67265.1 KY554774_p52 hypothetical protein phrog_5602 unknown function unknown function 1 25005 25148
ARM67304.1 KY554774_p91 hypothetical protein phrog_10879 unknown function unknown function 1 45506 45718
ARM67362.1 KY554774_p149 tail protein phrog_372 tail protein tail -1 86836 88668
ARM67330.1 KY554774_p117 hypothetical protein phrog_8864 unknown function unknown function 1 67775 68185
ARM67276.1 KY554774_p63 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30605 31651
ARM67245.1 KY554774_p32 hypothetical protein phrog_8431 unknown function unknown function -1 16077 16601
ARM67302.1 KY554774_p89 hypothetical protein phrog_9179 unknown function unknown function 1 44822 45205
ARM67382.1 KY554774_p169 structural protein phrog_4147 unknown function unknown function -1 114223 114744
ARM67357.1 KY554774_p144 hypothetical protein phrog_8457 unknown function unknown function 1 84950 85195
ARM67251.1 KY554774_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18679 19104
ARM67378.1 KY554774_p165 hypothetical protein phrog_5523 unknown function unknown function -1 111684 111992
ARM67317.1 KY554774_p104 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 57581 58240
ARM67339.1 KY554774_p126 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72775 73020
ARM67311.1 KY554774_p98 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53248 53931
ARM67363.1 KY554774_p150 tail protein phrog_8704 tail protein tail -1 88668 93827
ARM67237.1 KY554774_p24 glycosyltransferase phrog_7574 unknown function unknown function 1 11015 11524
ARM67233.1 KY554774_p20 hypothetical protein phrog_8787 unknown function unknown function 1 9782 10009
ARM67376.1 KY554774_p163 structural protein phrog_6123 virion structural protein head and packaging -1 110325 110936
ARM67253.1 KY554774_p40 hypothetical protein phrog_11685 unknown function unknown function -1 19477 19677
ARM67288.1 KY554774_p75 hypothetical protein phrog_8481 unknown function unknown function 1 39089 39424
ARM67381.1 KY554774_p168 structural protein phrog_4088 unknown function unknown function -1 113165 114184
ARM67287.1 KY554774_p74 hypothetical protein phrog_9207 unknown function unknown function 1 38791 39096
ARM67295.1 KY554774_p82 hypothetical protein phrog_8802 unknown function unknown function 1 41235 41456
ARM67375.1 KY554774_p162 hypothetical protein phrog_4051 unknown function unknown function -1 109580 110341
ARM67236.1 KY554774_p23 hypothetical protein phrog_12279 unknown function unknown function 1 10660 11022
ARM67333.1 KY554774_p120 hypothetical protein phrog_9035 unknown function unknown function 1 70202 70348
ARM67267.1 KY554774_p54 hypothetical protein phrog_9372 unknown function unknown function 1 25548 25790
ARM67359.1 KY554774_p146 holin phrog_608 holin lysis -1 85944 86351
ARM67235.1 KY554774_p22 hypothetical protein phrog_3808 unknown function unknown function 1 10415 10663
ARM67352.1 KY554774_p139 hypothetical protein phrog_13224 unknown function unknown function 1 82235 82600
ARM67314.1 KY554774_p101 hypothetical protein phrog_8616 unknown function unknown function 1 56431 56688
ARM67282.1 KY554774_p69 hypothetical protein phrog_8350 unknown function unknown function 1 37073 37303
ARM67221.1 KY554774_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6345 6692
ARM67328.1 KY554774_p115 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66239 66574
ARM67227.1 KY554774_p14 hypothetical protein phrog_8459 unknown function unknown function 1 8595 8828
ARM67255.1 KY554774_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20334 20621
ARM67279.1 KY554774_p66 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33939 34988
ARM67308.1 KY554774_p95 hypothetical protein phrog_9039 unknown function unknown function 1 50053 50166
ARM67384.1 KY554774_p171 structural protein phrog_2739 portal protein head and packaging -1 116056 117597
ARM67272.1 KY554774_p59 endolysin singleton unknown function unknown function 1 28169 28744
ARM67324.1 KY554774_p111 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 62684 63055
ARM67215.1 KY554774_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1168 3492
ARM67230.1 KY554774_p17 hypothetical protein phrog_8701 unknown function unknown function 1 9254 9463
ARM67370.1 KY554774_p157 structural protein phrog_7299 virion structural protein head and packaging -1 106745 107224
ARM67383.1 KY554774_p170 structural protein phrog_3313 unknown function unknown function -1 114773 116044
ARM67360.1 KY554774_p147 hypothetical protein phrog_1382 unknown function unknown function -1 86351 86524
ARM67286.1 KY554774_p73 hypothetical protein phrog_6648 unknown function unknown function 1 38519 38791
ARM67222.1 KY554774_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6716 7051
ARM67349.1 KY554774_p136 hypothetical protein phrog_8636 unknown function unknown function 1 79185 79520
ARM67374.1 KY554774_p161 structural protein phrog_2729 virion structural protein head and packaging -1 108856 109560
ARM67289.1 KY554774_p76 hypothetical protein phrog_10013 unknown function unknown function 1 39506 39685
ARM67366.1 KY554774_p153 hypothetical protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95204 96145
ARM67315.1 KY554774_p102 hypothetical protein phrog_8518 unknown function unknown function 1 56681 57037
ARM67281.1 KY554774_p68 hypothetical protein phrog_6484 unknown function unknown function 1 36775 37062
ARM67318.1 KY554774_p105 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58319 59572
ARM67263.1 KY554774_p50 hypothetical protein phrog_8839 unknown function unknown function 1 24075 24659
ARM67341.1 KY554774_p128 hypothetical protein phrog_5083 unknown function unknown function 1 73907 74476
ARM67225.1 KY554774_p12 thymidine kinase phrog_592 thymidine kinase other 1 7556 8152
ARM67298.1 KY554774_p85 hypothetical protein phrog_10997 unknown function unknown function 1 42184 42666
ARM67285.1 KY554774_p72 hypothetical protein phrog_9602 unknown function unknown function 1 38170 38319
ARM67291.1 KY554774_p78 hypothetical protein phrog_8499 unknown function unknown function 1 39887 40123
ARM67337.1 KY554774_p124 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 71409 71735
ARM67300.1 KY554774_p87 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43936 44529
ARM67386.1 KY554774_p173 hypothetical protein phrog_3314 unknown function unknown function -1 119321 120349
ARM67321.1 KY554774_p108 hypothetical protein phrog_3458 unknown function unknown function 1 61919 62137
ARM67232.1 KY554774_p19 hypothetical protein phrog_5861 unknown function unknown function 1 9543 9704
ARM67306.1 KY554774_p93 hypothetical protein phrog_9951 unknown function unknown function 1 46031 46468
ARM67277.1 KY554774_p64 hypothetical protein phrog_6344 unknown function unknown function 1 31757 32374
ARM67327.1 KY554774_p114 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 64865 65851
ARM67278.1 KY554774_p65 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32384 33928
ARM67280.1 KY554774_p67 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 34992 36773
ARM67261.1 KY554774_p48 Zn-finger protein phrog_9029 unknown function unknown function 1 23698 23841
ARM67242.1 KY554774_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13052 13345
ARM67273.1 KY554774_p60 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28867 29100
ARM67260.1 KY554774_p47 hypothetical protein phrog_8325 unknown function unknown function 1 23412 23603
ARM67388.1 KY554774_p175 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 121704 123017
ARM67226.1 KY554774_p13 hypothetical protein phrog_8833 unknown function unknown function 1 8133 8477
ARM67332.1 KY554774_p119 hypothetical protein phrog_9300 unknown function unknown function 1 69248 69994
ARM67380.1 KY554774_p167 hypothetical protein phrog_5329 unknown function unknown function -1 112440 113102
ARM67348.1 KY554774_p135 hypothetical protein phrog_7920 unknown function unknown function 1 78563 79192
ARM67377.1 KY554774_p164 structural protein phrog_5251 unknown function unknown function -1 110930 111682
ARM67297.1 KY554774_p84 hypothetical protein phrog_11525 unknown function unknown function 1 41982 42242
ARM67353.1 KY554774_p140 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 82976 83875
ARM67243.1 KY554774_p30 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13402 14085
ARM67325.1 KY554774_p112 ribonucleotide-diphosphate reductase subunit alpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63069 63815
ARM67368.1 KY554774_p155 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 98869 105738