Genomic map of Lactococcus phage AM11 (KY554775)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554775
Definition
Lactococcus phage AM11, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
126161
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
178
%GC
32.54
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM67400.1 KY554775_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6346 6693
ARM67451.1 KY554775_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28878 29102
ARM67480.1 KY554775_p88 hypothetical protein phrog_9179 unknown function unknown function 1 44824 45207
ARM67546.1 KY554775_p154 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 96990 106607
ARM67397.1 KY554775_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5112 5711
ARM67406.1 KY554775_p14 hypothetical protein phrog_8459 unknown function unknown function 1 8596 8829
ARM67417.1 KY554775_p25 hypothetical protein phrog_6072 unknown function unknown function 1 11522 11767
ARM67522.1 KY554775_p130 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 75486 76406
ARM67536.1 KY554775_p144 hypothetical protein phrog_8457 unknown function unknown function 1 85683 85928
ARM67505.1 KY554775_p113 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 64867 65853
ARM67485.1 KY554775_p93 hypothetical protein phrog_6282 unknown function unknown function 1 48241 48756
ARM67507.1 KY554775_p115 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism 1 66661 67464
ARM67559.1 KY554775_p167 structural protein phrog_4088 unknown function unknown function -1 114034 115053
ARM67562.1 KY554775_p170 structural protein phrog_2739 portal protein head and packaging -1 116925 118466
ARM67541.1 KY554775_p149 tail protein phrog_372 tail protein tail -1 87569 89401
ARM67409.1 KY554775_p17 hypothetical protein phrog_8701 unknown function unknown function 1 9255 9464
ARM67408.1 KY554775_p16 hypothetical protein phrog_8095 unknown function unknown function 1 9029 9253
ARM67487.1 KY554775_p95 hypothetical protein phrog_1491 tail fiber protein tail 1 50182 50838
ARM67413.1 KY554775_p21 hypothetical protein phrog_289 GTP-binding domain other 1 10028 10405
ARM67473.1 KY554775_p81 hypothetical protein phrog_8802 unknown function unknown function 1 41237 41458
ARM67468.1 KY554775_p76 hypothetical protein phrog_8586 unknown function unknown function 1 39660 39899
ARM67422.1 KY554775_p30 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13403 14086
ARM67534.1 KY554775_p142 hypothetical protein phrog_9397 unknown function unknown function 1 84864 85196
ARM67527.1 KY554775_p135 hypothetical protein phrog_7920 unknown function unknown function 1 79296 79925
ARM67556.1 KY554775_p164 hypothetical protein phrog_5523 unknown function unknown function -1 112553 112861
ARM67513.1 KY554775_p121 hypothetical protein phrog_8612 unknown function unknown function 1 71078 71299
ARM67569.1 KY554775_p177 hypothetical protein phrog_8285 unknown function unknown function -1 124495 124827
ARM67434.1 KY554775_p42 hypothetical protein phrog_9313 unknown function unknown function -1 20335 20622
ARM67509.1 KY554775_p117 hypothetical protein phrog_8864 unknown function unknown function 1 68508 68918
ARM67555.1 KY554775_p163 structural protein phrog_5251 unknown function unknown function -1 111799 112551
ARM67396.1 KY554775_p4 transglycosylase phrog_4602 transglycosylase other 1 4251 4850
ARM67510.1 KY554775_p118 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 69000 69917
ARM67452.1 KY554775_p60 hypothetical protein phrog_2367 unknown function unknown function 1 29202 30404
ARM67476.1 KY554775_p84 hypothetical protein phrog_10997 unknown function unknown function 1 42186 42668
ARM67564.1 KY554775_p172 hypothetical protein phrog_3314 unknown function unknown function -1 120190 121218
ARM67474.1 KY554775_p82 hypothetical protein phrog_8755 unknown function unknown function 1 41719 41982
ARM67508.1 KY554775_p116 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67602 68495
ARM67432.1 KY554775_p40 hypothetical protein phrog_11685 unknown function unknown function -1 19478 19678
ARM67419.1 KY554775_p27 hypothetical protein phrog_121 unknown function unknown function 1 12099 12710
ARM67414.1 KY554775_p22 hypothetical protein phrog_3808 unknown function unknown function 1 10416 10664
ARM67462.1 KY554775_p70 hypothetical protein phrog_1123 unknown function unknown function 1 37873 38172
ARM67458.1 KY554775_p66 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 34994 36775
ARM67519.1 KY554775_p127 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 74284 74562
ARM67444.1 KY554775_p52 hypothetical protein phrog_5602 unknown function unknown function 1 25006 25149
ARM67506.1 KY554775_p114 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66241 66576
ARM67492.1 KY554775_p100 hypothetical protein phrog_8616 unknown function unknown function 1 56433 56690
ARM67537.1 KY554775_p145 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85944 86624
ARM67436.1 KY554775_p44 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20823 21164
ARM67404.1 KY554775_p12 thymidine kinase phrog_592 thymidine kinase other 1 7557 8153
ARM67412.1 KY554775_p20 hypothetical protein phrog_8787 unknown function unknown function 1 9783 10010
ARM67459.1 KY554775_p67 hypothetical protein phrog_6484 unknown function unknown function 1 36777 37064
ARM67563.1 KY554775_p171 protein YonF phrog_2 terminase large subunit head and packaging -1 118490 120187
ARM67405.1 KY554775_p13 hypothetical protein phrog_8833 unknown function unknown function 1 8134 8478
ARM67466.1 KY554775_p74 hypothetical protein phrog_8481 unknown function unknown function 1 39091 39426
ARM67428.1 KY554775_p36 hypothetical protein phrog_8724 unknown function unknown function -1 18128 18280
ARM67523.1 KY554775_p131 guanylate kinase phrog_1815 guanylate kinase other 1 76485 77165
ARM67544.1 KY554775_p152 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 95487 95732
ARM67545.1 KY554775_p153 zinc-ribbon-containing protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95937 96878
ARM67448.1 KY554775_p56 hypothetical protein phrog_8553 unknown function unknown function 1 26456 26851
ARM67464.1 KY554775_p72 hypothetical protein phrog_6648 unknown function unknown function 1 38521 38793
ARM67535.1 KY554775_p143 hypothetical protein phrog_8668 unknown function unknown function 1 85199 85546
ARM67469.1 KY554775_p77 hypothetical protein phrog_8499 unknown function unknown function 1 39889 40125
ARM67524.1 KY554775_p132 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 77143 77886
ARM67488.1 KY554775_p96 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51338 53101
ARM67449.1 KY554775_p57 hypothetical protein phrog_8387 unknown function unknown function 1 26848 27606
ARM67425.1 KY554775_p33 hypothetical protein phrog_10208 unknown function unknown function -1 16978 17436
ARM67393.1 KY554775_p1 integrase phrog_1 integrase integration and excision 1 141 1160
ARM67438.1 KY554775_p46 hypothetical protein phrog_14409 unknown function unknown function 1 22403 22648
ARM67551.1 KY554775_p159 hypothetical protein phrog_8442 unknown function unknown function -1 109235 109654
ARM67411.1 KY554775_p19 hypothetical protein phrog_5861 unknown function unknown function 1 9544 9705
ARM67529.1 KY554775_p137 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 80349 82520
ARM67407.1 KY554775_p15 hypothetical protein phrog_12446 unknown function unknown function 1 8813 9028
ARM67454.1 KY554775_p62 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30607 31653
ARM67491.1 KY554775_p99 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54276 56390
ARM67421.1 KY554775_p29 hypothetical protein phrog_8622 unknown function unknown function 1 13053 13346
ARM67540.1 KY554775_p148 hypothetical protein phrog_6227 unknown function unknown function -1 87266 87553
ARM67496.1 KY554775_p104 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58321 59574
ARM67497.1 KY554775_p105 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 59859 61148
ARM67465.1 KY554775_p73 hypothetical protein phrog_9207 unknown function unknown function 1 38793 39098
ARM67433.1 KY554775_p41 hypothetical protein phrog_11078 unknown function unknown function -1 20074 20277
ARM67482.1 KY554775_p90 hypothetical protein phrog_10879 unknown function unknown function 1 45508 45720
ARM67495.1 KY554775_p103 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 57583 58242
ARM67455.1 KY554775_p63 hypothetical protein phrog_6344 unknown function unknown function 1 31759 32376
ARM67511.1 KY554775_p119 hypothetical protein phrog_9300 unknown function unknown function 1 69981 70727
ARM67478.1 KY554775_p86 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43938 44531
ARM67558.1 KY554775_p166 hypothetical protein phrog_5329 unknown function unknown function -1 113309 113971
ARM67430.1 KY554775_p38 hypothetical protein phrog_10958 unknown function unknown function -1 18680 19105
ARM67470.1 KY554775_p78 hypothetical protein phrog_8756 unknown function unknown function 1 40125 40418
ARM67517.1 KY554775_p125 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72565 73263
ARM67518.1 KY554775_p126 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73508 73753
ARM67543.1 KY554775_p151 tail component phrog_33 distal tail protein Dit tail -1 94671 95435
ARM67426.1 KY554775_p34 hypothetical protein phrog_5149 unknown function unknown function -1 17449 17685
ARM67503.1 KY554775_p111 ribonucleotide diphosphate reductase subunit aplpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63071 63817
ARM67472.1 KY554775_p80 hypothetical protein phrog_8664 unknown function unknown function 1 40790 41233
ARM67442.1 KY554775_p50 hypothetical protein phrog_8839 unknown function unknown function 1 24076 24660
ARM67500.1 KY554775_p108 hypothetical protein phrog_8513 unknown function unknown function 1 62139 62390
ARM67525.1 KY554775_p133 protease phrog_3677 protease other 1 77982 78743
ARM67489.1 KY554775_p97 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53250 53933
ARM67416.1 KY554775_p24 glycosyltransferase phrog_7574 unknown function unknown function 1 11016 11525
ARM67461.1 KY554775_p69 hypothetical protein phrog_11247 unknown function unknown function 1 37307 37786
ARM67504.1 KY554775_p112 HNH protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64073 64735
ARM67561.1 KY554775_p169 structural protein phrog_3313 unknown function unknown function -1 115642 116913
ARM67453.1 KY554775_p61 hypothetical protein phrog_11669 unknown function unknown function 1 30430 30606
ARM67547.1 KY554775_p155 integrase/site specific recombinase phrog_1 integrase integration and excision -1 106625 107617
ARM67490.1 KY554775_p98 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54059 54274
ARM67460.1 KY554775_p68 hypothetical protein phrog_8350 unknown function unknown function 1 37075 37305
ARM67498.1 KY554775_p106 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61148 61744
ARM67539.1 KY554775_p147 hypothetical protein phrog_1382 unknown function unknown function -1 87084 87257
ARM67395.1 KY554775_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3586 4194
ARM67501.1 KY554775_p109 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62454 62693
ARM67423.1 KY554775_p31 hypothetical protein phrog_8151 unknown function unknown function 1 14149 14469
ARM67471.1 KY554775_p79 hypothetical protein phrog_1174 unknown function unknown function 1 40429 40725
ARM67424.1 KY554775_p32 hypothetical protein phrog_8431 unknown function unknown function -1 16078 16602
ARM67528.1 KY554775_p136 hypothetical protein phrog_8636 unknown function unknown function 1 79918 80253
ARM67456.1 KY554775_p64 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32386 33930
ARM67512.1 KY554775_p120 hypothetical protein phrog_9035 unknown function unknown function 1 70935 71081
ARM67567.1 KY554775_p175 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123870 124238
ARM67401.1 KY554775_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6717 7052
ARM67440.1 KY554775_p48 Zn-finger protein phrog_9029 unknown function unknown function 1 23699 23842
ARM67446.1 KY554775_p54 hypothetical protein phrog_9372 unknown function unknown function 1 25549 25791
ARM67553.1 KY554775_p161 hypothetical protein phrog_4051 unknown function unknown function -1 110449 111210
ARM67420.1 KY554775_p28 hypothetical protein phrog_8798 unknown function unknown function 1 12715 13050
ARM67429.1 KY554775_p37 hypothetical protein phrog_8271 unknown function unknown function -1 18318 18641
ARM67542.1 KY554775_p150 tail protein phrog_8704 tail protein tail -1 89401 94560
ARM67549.1 KY554775_p157 hypothetical protein phrog_8587 unknown function unknown function -1 108185 108802
ARM67399.1 KY554775_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5947 6330
ARM67531.1 KY554775_p139 hypothetical protein phrog_13224 unknown function unknown function 1 82968 83333
ARM67521.1 KY554775_p129 hypothetical protein phrog_9040 unknown function unknown function 1 75215 75496
ARM67486.1 KY554775_p94 hypothetical protein phrog_9039 unknown function unknown function 1 50055 50168
ARM67565.1 KY554775_p173 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 121316 122563
ARM67403.1 KY554775_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7273 7524
ARM67475.1 KY554775_p83 hypothetical protein phrog_11525 unknown function unknown function 1 41984 42244
ARM67502.1 KY554775_p110 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 62686 63057
ARM67481.1 KY554775_p89 hypothetical protein phrog_9087 unknown function unknown function 1 45250 45444
ARM67431.1 KY554775_p39 hypothetical protein phrog_12408 unknown function unknown function -1 19262 19405
ARM67477.1 KY554775_p85 AAA superfamily ATPase phrog_2376 ATPase other 1 42784 43860
ARM67447.1 KY554775_p55 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 25870 26469
ARM67532.1 KY554775_p140 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 83709 84608
ARM67418.1 KY554775_p26 hypothetical protein phrog_9894 unknown function unknown function 1 11801 11965
ARM67560.1 KY554775_p168 structural protein phrog_4147 unknown function unknown function -1 115092 115613
ARM67457.1 KY554775_p65 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33941 34990
ARM67435.1 KY554775_p43 hypothetical protein phrog_8989 unknown function unknown function -1 20635 20751
ARM67441.1 KY554775_p49 hypothetical protein phrog_11294 unknown function unknown function 1 23839 24072
ARM67398.1 KY554775_p6 transglycosylase phrog_10170 transglycosylase other 1 5704 5823
ARM67516.1 KY554775_p124 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 72142 72468
ARM67570.1 KY554775_p178 hypothetical protein phrog_8340 unknown function unknown function -1 124808 125266
ARM67548.1 KY554775_p156 structural protein phrog_7299 virion structural protein head and packaging -1 107614 108093
ARM67445.1 KY554775_p53 hypothetical protein phrog_5462 unknown function unknown function 1 25146 25478
ARM67439.1 KY554775_p47 hypothetical protein phrog_8325 unknown function unknown function 1 23413 23604
ARM67427.1 KY554775_p35 hypothetical protein phrog_8376 unknown function unknown function -1 17753 18118
ARM67479.1 KY554775_p87 hypothetical protein phrog_4997 unknown function unknown function 1 44591 44821
ARM67443.1 KY554775_p51 hypothetical protein phrog_8461 unknown function unknown function 1 24653 24907
ARM67437.1 KY554775_p45 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21866 22357
ARM67450.1 KY554775_p58 endolysin phrog_3393 endolysin lysis 1 27712 28746
ARM67410.1 KY554775_p18 hypothetical protein phrog_9177 unknown function unknown function 1 9454 9543
ARM67494.1 KY554775_p102 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57039 57581
ARM67415.1 KY554775_p23 hypothetical protein phrog_12279 unknown function unknown function 1 10661 11023
ARM67499.1 KY554775_p107 hypothetical protein phrog_3458 unknown function unknown function 1 61921 62139
ARM67550.1 KY554775_p158 hypothetical protein phrog_8692 unknown function unknown function -1 108871 109248
ARM67557.1 KY554775_p165 structural protein phrog_3853 unknown function unknown function -1 112848 113288
ARM67533.1 KY554775_p141 hypothetical protein phrog_9412 unknown function unknown function 1 84692 84862
ARM67484.1 KY554775_p92 hypothetical protein phrog_9951 unknown function unknown function 1 46033 46470
ARM67402.1 KY554775_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7049 7273
ARM67520.1 KY554775_p128 hypothetical protein phrog_5083 unknown function unknown function 1 74640 75209
ARM67493.1 KY554775_p101 hypothetical protein phrog_8518 unknown function unknown function 1 56683 57039
ARM67467.1 KY554775_p75 hypothetical protein phrog_10013 unknown function unknown function 1 39508 39687
ARM67463.1 KY554775_p71 hypothetical protein phrog_9602 unknown function unknown function 1 38172 38321
ARM67526.1 KY554775_p134 hypothetical protein phrog_6081 unknown function unknown function 1 78733 79254
ARM67566.1 KY554775_p174 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 122573 123886
ARM67538.1 KY554775_p146 holin phrog_608 holin lysis -1 86677 87084
ARM67394.1 KY554775_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1169 3493
ARM67514.1 KY554775_p122 hypothetical protein phrog_9195 unknown function unknown function 1 71301 71696
ARM67568.1 KY554775_p176 hypothetical protein phrog_8012 unknown function unknown function -1 124235 124498
ARM67483.1 KY554775_p91 hypothetical protein phrog_8362 unknown function unknown function 1 45735 45980
ARM67554.1 KY554775_p162 structural protein phrog_6123 virion structural protein head and packaging -1 111194 111805
ARM67530.1 KY554775_p138 hypothetical protein phrog_13495 unknown function unknown function 1 82536 82766
ARM67552.1 KY554775_p160 structural protein phrog_2729 virion structural protein head and packaging -1 109725 110429
ARM67515.1 KY554775_p123 hypothetical protein phrog_8819 unknown function unknown function 1 71706 72062