Genomic map of Lactococcus phage AM12 (KY554776)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY554776
Definition
Lactococcus phage AM12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
125842
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
179
%GC
32.55
Number of singletons
3
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ95645.1 KY554776_p66 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33922 34971
ARQ95665.1 KY554776_p86 AAA superfamily ATPase phrog_2376 ATPase other 1 42765 43841
ARQ95715.1 KY554776_p136 hypothetical protein phrog_8636 unknown function unknown function 1 79168 79503
ARQ95697.1 KY554776_p118 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 68250 69167
ARQ95718.1 KY554776_p139 hypothetical protein phrog_13224 unknown function unknown function 1 82218 82583
ARQ95654.1 KY554776_p75 hypothetical protein phrog_8481 unknown function unknown function 1 39072 39407
ARQ95647.1 KY554776_p68 hypothetical protein phrog_6484 unknown function unknown function 1 36758 37045
ARQ95729.1 KY554776_p150 tail protein phrog_8704 tail protein tail -1 88651 93810
ARQ95676.1 KY554776_p97 DNA gyrase phrog_543 DNA topoisomerase II large subunit DNA, RNA and nucleotide metabolism 1 51319 53082
ARQ95646.1 KY554776_p67 single stranded DNA specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 34975 36756
ARQ95758.1 KY554776_p179 hypothetical protein phrog_8340 unknown function unknown function -1 124488 124946
ARQ95623.1 KY554776_p44 hypothetical protein phrog_8989 unknown function unknown function -1 20616 20732
ARQ95594.1 KY554776_p15 hypothetical protein phrog_8459 unknown function unknown function 1 8576 8809
ARQ95659.1 KY554776_p80 hypothetical protein phrog_1174 unknown function unknown function 1 40410 40706
ARQ95733.1 KY554776_p154 tail tape measure protein phrog_4211 tail length tape measure protein tail -1 96240 105857
ARQ95587.1 KY554776_p8 hypothetical protein phrog_1485 unknown function unknown function 1 6346 6693
ARQ95722.1 KY554776_p143 hypothetical protein phrog_8668 unknown function unknown function 1 84449 84796
ARQ95589.1 KY554776_p10 hypothetical protein phrog_8541 unknown function unknown function 1 7049 7273
ARQ95691.1 KY554776_p112 ribonucleotide diphosphate reductase subunit aplpha phrog_6132 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 63052 63798
ARQ95745.1 KY554776_p166 hypothetical protein phrog_5329 unknown function unknown function -1 112559 113221
ARQ95605.1 KY554776_p26 hypothetical protein phrog_6072 unknown function unknown function 1 11502 11747
ARQ95638.1 KY554776_p59 endolysin phrog_3393 endolysin lysis 1 27693 28727
ARQ95706.1 KY554776_p127 ribonucleoside-diphosphate reductase phrog_7909 ribonucleoside-diphosphate reductase beta subunit DNA, RNA and nucleotide metabolism 1 73534 73812
ARQ95709.1 KY554776_p130 ribonucleotide diphosphate reductase alpha subunit phrog_6397 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 74736 75656
ARQ95699.1 KY554776_p120 hypothetical protein phrog_9035 unknown function unknown function 1 70185 70331
ARQ95747.1 KY554776_p168 structural protein phrog_4147 unknown function unknown function -1 114342 114863
ARQ95717.1 KY554776_p138 hypothetical protein phrog_13495 unknown function unknown function 1 81786 82016
ARQ95674.1 KY554776_p95 hypothetical protein phrog_9039 unknown function unknown function 1 50036 50149
ARQ95596.1 KY554776_p17 hypothetical protein phrog_8095 unknown function unknown function 1 9009 9233
ARQ95650.1 KY554776_p71 hypothetical protein phrog_1123 unknown function unknown function 1 37854 38153
ARQ95630.1 KY554776_p51 hypothetical protein phrog_8839 unknown function unknown function 1 24057 24641
ARQ95725.1 KY554776_p146 holin phrog_608 holin lysis -1 85927 86334
ARQ95732.1 KY554776_p153 zinc-ribbon-containing protein phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism -1 95187 96128
ARQ95583.1 KY554776_p4 transglycosylase phrog_4602 transglycosylase other 1 4251 4850
ARQ95695.1 KY554776_p116 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66642 67745
ARQ95728.1 KY554776_p149 tail protein phrog_372 tail protein tail -1 86819 88651
ARQ95701.1 KY554776_p122 hypothetical protein phrog_9195 unknown function unknown function 1 70551 70946
ARQ95730.1 KY554776_p151 tail component phrog_33 distal tail protein Dit tail -1 93921 94685
ARQ95604.1 KY554776_p25 glycosyltransferase phrog_7574 unknown function unknown function 1 10996 11505
ARQ95687.1 KY554776_p108 hypothetical protein phrog_3458 unknown function unknown function 1 61902 62120
ARQ95636.1 KY554776_p57 hypothetical protein phrog_8553 unknown function unknown function 1 26437 26832
ARQ95703.1 KY554776_p124 nucleoside phosphate reductase phrog_9530 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 71392 71718
ARQ95597.1 KY554776_p18 hypothetical protein phrog_8701 unknown function unknown function 1 9235 9444
ARQ95598.1 KY554776_p19 hypothetical protein phrog_9177 unknown function unknown function 1 9434 9523
ARQ95637.1 KY554776_p58 hypothetical protein phrog_8387 unknown function unknown function 1 26829 27587
ARQ95711.1 KY554776_p132 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 76393 77136
ARQ95584.1 KY554776_p5 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5112 5711
ARQ95600.1 KY554776_p21 hypothetical protein phrog_8787 unknown function unknown function 1 9763 9990
ARQ95757.1 KY554776_p178 hypothetical protein phrog_8285 unknown function unknown function -1 124175 124507
ARQ95741.1 KY554776_p162 structural protein phrog_6123 virion structural protein head and packaging -1 110444 111055
ARQ95708.1 KY554776_p129 hypothetical protein phrog_9040 unknown function unknown function 1 74465 74746
ARQ95664.1 KY554776_p85 hypothetical protein phrog_10997 unknown function unknown function 1 42167 42649
ARQ95632.1 KY554776_p53 hypothetical protein phrog_5602 unknown function unknown function 1 24987 25130
ARQ95735.1 KY554776_p156 structural protein phrog_7299 virion structural protein head and packaging -1 106864 107343
ARQ95635.1 KY554776_p56 nucleotidase phrog_8630 nucleotidase DNA, RNA and nucleotide metabolism 1 25851 26450
ARQ95686.1 KY554776_p107 ribonucleoside triphosphate reductase activator small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 61129 61725
ARQ95751.1 KY554776_p172 protein YonF phrog_2 terminase large subunit head and packaging -1 118170 119867
ARQ95689.1 KY554776_p110 ribonucleotide diphosphate reductase glutaredoxin subunit phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 62435 62674
ARQ95595.1 KY554776_p16 hypothetical protein phrog_12446 unknown function unknown function 1 8793 9008
ARQ95611.1 KY554776_p32 hypothetical protein phrog_8151 unknown function unknown function 1 14129 14449
ARQ95657.1 KY554776_p78 hypothetical protein phrog_8499 unknown function unknown function 1 39870 40106
ARQ95586.1 KY554776_p7 hypothetical protein phrog_8338 unknown function unknown function 1 5947 6330
ARQ95682.1 KY554776_p103 nucleoside-2-deoxyribosyltransferase phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 57020 57562
ARQ95615.1 KY554776_p36 hypothetical protein phrog_8376 unknown function unknown function -1 17733 18098
ARQ95655.1 KY554776_p76 hypothetical protein phrog_10013 unknown function unknown function 1 39489 39668
ARQ95749.1 KY554776_p170 structural protein singleton unknown function unknown function -1 116175 116549
ARQ95656.1 KY554776_p77 hypothetical protein phrog_8586 unknown function unknown function 1 39641 39880
ARQ95752.1 KY554776_p173 hypothetical protein phrog_3314 unknown function unknown function -1 119870 120898
ARQ95681.1 KY554776_p102 hypothetical protein phrog_8518 unknown function unknown function 1 56664 57020
ARQ95710.1 KY554776_p131 guanylate kinase phrog_1815 guanylate kinase other 1 75735 76415
ARQ95672.1 KY554776_p93 hypothetical protein phrog_9951 unknown function unknown function 1 46014 46451
ARQ95742.1 KY554776_p163 structural protein phrog_5251 unknown function unknown function -1 111049 111801
ARQ95671.1 KY554776_p92 hypothetical protein phrog_8362 unknown function unknown function 1 45716 45961
ARQ95721.1 KY554776_p142 hypothetical protein phrog_9397 unknown function unknown function 1 84114 84446
ARQ95746.1 KY554776_p167 structural protein phrog_4088 unknown function unknown function -1 113284 114303
ARQ95668.1 KY554776_p89 hypothetical protein phrog_9179 unknown function unknown function 1 44805 45188
ARQ95606.1 KY554776_p27 hypothetical protein phrog_9894 unknown function unknown function 1 11781 11945
ARQ95737.1 KY554776_p158 hypothetical protein phrog_8692 unknown function unknown function -1 108121 108498
ARQ95713.1 KY554776_p134 hypothetical protein phrog_6081 unknown function unknown function 1 77983 78504
ARQ95592.1 KY554776_p13 hypothetical protein singleton unknown function unknown function 1 8134 8349
ARQ95754.1 KY554776_p175 phosphate-starvation-inducible protein PhoH/ATPase phrog_2765 PhoH-like phosphate starvation-inducible other -1 122253 123566
ARQ95585.1 KY554776_p6 transglycosylase phrog_10170 transglycosylase other 1 5704 5823
ARQ95680.1 KY554776_p101 hypothetical protein phrog_8616 unknown function unknown function 1 56414 56671
ARQ95736.1 KY554776_p157 hypothetical protein phrog_8587 unknown function unknown function -1 107435 108052
ARQ95580.1 KY554776_p1 integrase phrog_1 integrase integration and excision 1 141 1160
ARQ95640.1 KY554776_p61 hypothetical protein phrog_2367 unknown function unknown function 1 29183 30385
ARQ95670.1 KY554776_p91 hypothetical protein phrog_10879 unknown function unknown function 1 45489 45701
ARQ95683.1 KY554776_p104 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 57564 58223
ARQ95679.1 KY554776_p100 DNA gyrase subunit A-topoisomerase phrog_551 DNA topoisomerase II DNA, RNA and nucleotide metabolism 1 54257 56371
ARQ95716.1 KY554776_p137 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 79599 81770
ARQ95702.1 KY554776_p123 hypothetical protein phrog_8819 unknown function unknown function 1 70956 71312
ARQ95639.1 KY554776_p60 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 28859 29083
ARQ95582.1 KY554776_p3 hypothetical protein phrog_8504 unknown function unknown function 1 3586 4194
ARQ95610.1 KY554776_p31 DNA methylase family protein phrog_67 DNA methyltransferase other 1 13383 14066
ARQ95700.1 KY554776_p121 hypothetical protein phrog_8612 unknown function unknown function 1 70328 70549
ARQ95652.1 KY554776_p73 hypothetical protein phrog_6648 unknown function unknown function 1 38502 38774
ARQ95593.1 KY554776_p14 hypothetical protein singleton unknown function unknown function 1 8294 8458
ARQ95755.1 KY554776_p176 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 123550 123918
ARQ95660.1 KY554776_p81 hypothetical protein phrog_8664 unknown function unknown function 1 40771 41214
ARQ95581.1 KY554776_p2 exodeoxyribonuclease phrog_4412 exonuclease V DNA, RNA and nucleotide metabolism 1 1169 3493
ARQ95591.1 KY554776_p12 thymidine kinase phrog_592 thymidine kinase other 1 7557 8153
ARQ95627.1 KY554776_p48 hypothetical protein phrog_8325 unknown function unknown function 1 23394 23585
ARQ95644.1 KY554776_p65 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32367 33911
ARQ95720.1 KY554776_p141 hypothetical protein phrog_9412 unknown function unknown function 1 83942 84112
ARQ95609.1 KY554776_p30 hypothetical protein phrog_8622 unknown function unknown function 1 13033 13326
ARQ95607.1 KY554776_p28 hypothetical protein phrog_121 unknown function unknown function 1 12079 12690
ARQ95628.1 KY554776_p49 Zn-finger protein phrog_9029 unknown function unknown function 1 23680 23823
ARQ95675.1 KY554776_p96 hypothetical protein phrog_1491 tail fiber protein tail 1 50163 50819
ARQ95688.1 KY554776_p109 hypothetical protein phrog_8513 unknown function unknown function 1 62120 62371
ARQ95690.1 KY554776_p111 ribonucleotide reductase stimulatory protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 62667 63038
ARQ95648.1 KY554776_p69 hypothetical protein phrog_8350 unknown function unknown function 1 37056 37286
ARQ95626.1 KY554776_p47 hypothetical protein phrog_14409 unknown function unknown function 1 22384 22629
ARQ95613.1 KY554776_p34 hypothetical protein phrog_10208 unknown function unknown function -1 16958 17416
ARQ95631.1 KY554776_p52 hypothetical protein phrog_8461 unknown function unknown function 1 24634 24888
ARQ95616.1 KY554776_p37 hypothetical protein phrog_8724 unknown function unknown function -1 18108 18260
ARQ95743.1 KY554776_p164 hypothetical protein phrog_5523 unknown function unknown function -1 111803 112111
ARQ95748.1 KY554776_p169 structural protein phrog_3313 unknown function unknown function -1 114892 116163
ARQ95714.1 KY554776_p135 hypothetical protein phrog_7920 unknown function unknown function 1 78546 79175
ARQ95590.1 KY554776_p11 hypothetical protein phrog_8658 unknown function unknown function 1 7273 7524
ARQ95642.1 KY554776_p63 AAA domain-containing protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30588 31634
ARQ95624.1 KY554776_p45 LamB/ Ycsf family protein phrog_8645 unknown function unknown function -1 20804 21145
ARQ95677.1 KY554776_p98 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism 1 53231 53914
ARQ95617.1 KY554776_p38 hypothetical protein phrog_8271 unknown function unknown function -1 18299 18622
ARQ95661.1 KY554776_p82 hypothetical protein phrog_8802 unknown function unknown function 1 41218 41439
ARQ95663.1 KY554776_p84 hypothetical protein phrog_11525 unknown function unknown function 1 41965 42225
ARQ95693.1 KY554776_p114 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 64848 65834
ARQ95734.1 KY554776_p155 integrase/site specific recombinase phrog_1 integrase integration and excision -1 105875 106867
ARQ95727.1 KY554776_p148 hypothetical protein phrog_6227 unknown function unknown function -1 86516 86803
ARQ95608.1 KY554776_p29 hypothetical protein phrog_8798 unknown function unknown function 1 12695 13030
ARQ95619.1 KY554776_p40 hypothetical protein phrog_12408 unknown function unknown function -1 19243 19386
ARQ95629.1 KY554776_p50 hypothetical protein phrog_11294 unknown function unknown function 1 23820 24053
ARQ95678.1 KY554776_p99 DNA gyrase phrog_12023 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 54040 54255
ARQ95740.1 KY554776_p161 hypothetical protein phrog_4051 unknown function unknown function -1 109699 110460
ARQ95641.1 KY554776_p62 hypothetical protein phrog_11669 unknown function unknown function 1 30411 30587
ARQ95633.1 KY554776_p54 hypothetical protein phrog_5462 unknown function unknown function 1 25127 25459
ARQ95625.1 KY554776_p46 NUMOD4 motif protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21847 22338
ARQ95651.1 KY554776_p72 hypothetical protein phrog_9602 unknown function unknown function 1 38153 38302
ARQ95731.1 KY554776_p152 tail tape measure protein phrog_12717 tail length tape measure protein tail -1 94737 94982
ARQ95653.1 KY554776_p74 hypothetical protein phrog_9207 unknown function unknown function 1 38774 39079
ARQ95662.1 KY554776_p83 hypothetical protein phrog_8755 unknown function unknown function 1 41700 41963
ARQ95726.1 KY554776_p147 hypothetical protein phrog_1382 unknown function unknown function -1 86334 86507
ARQ95684.1 KY554776_p105 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 58302 59555
ARQ95704.1 KY554776_p125 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 71815 72513
ARQ95622.1 KY554776_p43 hypothetical protein phrog_9313 unknown function unknown function -1 20316 20603
ARQ95666.1 KY554776_p87 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43919 44512
ARQ95698.1 KY554776_p119 hypothetical protein phrog_9300 unknown function unknown function 1 69231 69977
ARQ95723.1 KY554776_p144 hypothetical protein phrog_8457 unknown function unknown function 1 84933 85178
ARQ95643.1 KY554776_p64 hypothetical protein phrog_6344 unknown function unknown function 1 31740 32357
ARQ95724.1 KY554776_p145 holliday junction endonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 85194 85874
ARQ95707.1 KY554776_p128 hypothetical protein phrog_5083 unknown function unknown function 1 73890 74459
ARQ95673.1 KY554776_p94 hypothetical protein phrog_6282 unknown function unknown function 1 48222 48737
ARQ95588.1 KY554776_p9 hypothetical protein phrog_8534 unknown function unknown function 1 6717 7052
ARQ95603.1 KY554776_p24 hypothetical protein phrog_12279 unknown function unknown function 1 10641 11003
ARQ95750.1 KY554776_p171 structural protein phrog_2739 portal protein head and packaging -1 116605 118146
ARQ95649.1 KY554776_p70 hypothetical protein phrog_11247 unknown function unknown function 1 37288 37767
ARQ95667.1 KY554776_p88 hypothetical protein phrog_4997 unknown function unknown function 1 44572 44802
ARQ95612.1 KY554776_p33 hypothetical protein phrog_8431 unknown function unknown function -1 16058 16582
ARQ95658.1 KY554776_p79 hypothetical protein phrog_8756 unknown function unknown function 1 40106 40399
ARQ95602.1 KY554776_p23 hypothetical protein phrog_3808 unknown function unknown function 1 10396 10644
ARQ95705.1 KY554776_p126 ribonucleoside triphosphate reductase activator small subunit phrog_9465 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72758 73003
ARQ95634.1 KY554776_p55 hypothetical protein phrog_9372 unknown function unknown function 1 25530 25772
ARQ95739.1 KY554776_p160 structural protein phrog_2729 virion structural protein head and packaging -1 108975 109679
ARQ95753.1 KY554776_p174 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 120996 122243
ARQ95685.1 KY554776_p106 anaerobic ribonucleoside triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 59840 61129
ARQ95614.1 KY554776_p35 hypothetical protein phrog_5149 unknown function unknown function -1 17429 17665
ARQ95601.1 KY554776_p22 hypothetical protein phrog_289 GTP-binding domain other 1 10008 10385
ARQ95696.1 KY554776_p117 hypothetical protein phrog_8864 unknown function unknown function 1 67758 68168
ARQ95620.1 KY554776_p41 hypothetical protein phrog_11685 unknown function unknown function -1 19459 19659
ARQ95599.1 KY554776_p20 hypothetical protein phrog_5861 unknown function unknown function 1 9524 9685
ARQ95669.1 KY554776_p90 hypothetical protein phrog_9087 unknown function unknown function 1 45231 45425
ARQ95756.1 KY554776_p177 hypothetical protein phrog_8012 unknown function unknown function -1 123915 124178
ARQ95618.1 KY554776_p39 hypothetical protein phrog_10958 unknown function unknown function -1 18661 19086
ARQ95719.1 KY554776_p140 DNA polymerase III alpha subunit phrog_11119 DNA polymerase DNA, RNA and nucleotide metabolism 1 82959 83858
ARQ95621.1 KY554776_p42 hypothetical protein phrog_11078 unknown function unknown function -1 20055 20258
ARQ95712.1 KY554776_p133 protease phrog_3677 protease other 1 77232 77993
ARQ95744.1 KY554776_p165 structural protein phrog_3853 unknown function unknown function -1 112098 112538
ARQ95692.1 KY554776_p113 HNH protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64054 64716
ARQ95738.1 KY554776_p159 hypothetical protein phrog_8442 unknown function unknown function -1 108485 108904
ARQ95694.1 KY554776_p115 ribonucleotide diphosphate reductase subunit aplpha phrog_10616 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 66222 66557