| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY565347 |
Definition |
Geobacillus phage TP-84, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saundersvirus; Geobacillus virus Tp84. |
DB of origin |
NUCCORE |
Length |
47703 |
Host Name |
Geobacillus stearothermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
45.54 |
Number of singletons |
38 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AQY55063.1 | KY565347_p44 | hypothetical protein | phrog_4223 | unknown function | unknown function | 1 | 29839 | 30069 |
| AQY55104.1 | KY565347_p6 | capsid portal protein | phrog_533 | portal protein | head and packaging | 1 | 3174 | 4802 |
| AQY55094.1 | KY565347_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45857 | 46042 |
| ATP06113.1 | KY565347_p47 | hypothetical protein | phrog_5156 | unknown function | unknown function | 1 | 30527 | 32791 |
| AQY55128.1 | KY565347_p70 | holliday junction-specific endonuclease | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 44246 | 44749 |
| AQY55111.1 | KY565347_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9802 | 9996 |
| ATP06115.1 | KY565347_p67 | dUTP diphosphatase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 43200 | 43700 |
| AQY55098.1 | KY565347_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47379 | 47519 |
| AQY55092.1 | KY565347_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45546 | 45659 |
| AQY55100.1 | KY565347_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 576 | 1874 |
| AQY55070.1 | KY565347_p51 | HTH_XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34030 | 34266 |
| AQY55072.1 | KY565347_p53 | DNA single-strand annealing protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35270 | 36289 |
| AQY55113.1 | KY565347_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10358 | 10681 |
| AQY55068.1 | KY565347_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33468 | 33626 |
| AQY55124.1 | KY565347_p26 | glycosylase | phrog_3432 | minor tail protein | tail | 1 | 20179 | 23154 |
| AQY55107.1 | KY565347_p9 | membrane-associated protein | singleton | unknown function | unknown function | 1 | 7004 | 7213 |
| AQY55099.1 | KY565347_p1 | terminase small subunit | phrog_6299 | terminase small subunit | head and packaging | 1 | 13 | 579 |
| AQY55112.1 | KY565347_p14 | hypothetical protein | phrog_10959 | unknown function | unknown function | 1 | 10032 | 10361 |
| AQY55069.1 | KY565347_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33832 | 33990 |
| AQY55056.1 | KY565347_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28090 | 28290 |
| ATP06111.1 | KY565347_p31 | membrane protein | singleton | unknown function | unknown function | 1 | 26023 | 26178 |
| AQY55089.1 | KY565347_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44014 | 44259 |
| AQY55101.1 | KY565347_p3 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 1868 | 2554 |
| AQY55085.1 | KY565347_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42023 | 42205 |
| AQY55079.1 | KY565347_p59 | HNH homing endonuclease | phrog_7370 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40281 | 40715 |
| AQY55088.1 | KY565347_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43704 | 44033 |
| AQY55075.1 | KY565347_p56 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 37127 | 37909 |
| AQY55097.1 | KY565347_p78 | hypothetical protein | phrog_24885 | unknown function | unknown function | 1 | 46741 | 47106 |
| AQY55047.1 | KY565347_p30 | hypothetical protein | phrog_38379 | unknown function | unknown function | 1 | 25329 | 25901 |
| AQY55053.1 | KY565347_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27353 | 27589 |
| AQY55073.1 | KY565347_p54 | hypothetical protein | phrog_31095 | unknown function | unknown function | 1 | 36337 | 36558 |
| AQY55090.1 | KY565347_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44746 | 45009 |
| AQY55127.1 | KY565347_p29 | membrane-associated protein | singleton | unknown function | unknown function | 1 | 24877 | 25077 |
| AQY55117.1 | KY565347_p19 | hypothetical protein | phrog_18220 | unknown function | unknown function | 1 | 12220 | 12726 |
| AQY55051.1 | KY565347_p34 | membrane protein | singleton | unknown function | unknown function | 1 | 26884 | 27138 |
| AQY55106.1 | KY565347_p8 | minor capsid protein | phrog_4611 | minor head protein | head and packaging | 1 | 4962 | 7007 |
| AQY55096.1 | KY565347_p77 | hypothetical protein | phrog_24885 | unknown function | unknown function | 1 | 46380 | 46733 |
| AQY55093.1 | KY565347_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45675 | 45800 |
| AQY55081.1 | KY565347_p61 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40851 | 41318 |
| AQY55055.1 | KY565347_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27698 | 28093 |
| AQY55086.1 | KY565347_p66 | thymidylate synthase | phrog_24884 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 42209 | 43195 |
| AQY55119.1 | KY565347_p21 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 13081 | 15678 |
| AQY55065.1 | KY565347_p46 | membrane protein | phrog_5422 | unknown function | unknown function | 1 | 30252 | 30632 |
| AQY55074.1 | KY565347_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36924 | 37106 |
| AQY55114.1 | KY565347_p16 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 10671 | 11159 |
| AQY55122.1 | KY565347_p24 | hypothetical protein | phrog_3473 | unknown function | unknown function | 1 | 19061 | 19270 |
| AQY55102.1 | KY565347_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2586 | 2939 |
| AQY55091.1 | KY565347_p72 | hypothetical protein | phrog_15234 | unknown function | unknown function | 1 | 44984 | 45529 |
| AQY55110.1 | KY565347_p12 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 8736 | 9728 |
| AQY55126.1 | KY565347_p28 | endolysin | phrog_291 | endolysin | lysis | 1 | 23676 | 24860 |
| AQY55121.1 | KY565347_p23 | tail protein | phrog_3475 | minor tail protein | tail | 1 | 16438 | 19071 |
| AQY55057.1 | KY565347_p39 | hypothetical protein | phrog_4745 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28403 | 28618 |
| AQY55078.1 | KY565347_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39632 | 40303 |
| AQY55120.1 | KY565347_p22 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 15684 | 16421 |
| AQY55103.1 | KY565347_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2957 | 3154 |
| AQY55064.1 | KY565347_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30071 | 30283 |
| AQY55067.1 | KY565347_p48 | hypothetical protein | phrog_10569 | unknown function | unknown function | 1 | 32871 | 33344 |
| AQY55105.1 | KY565347_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4799 | 4945 |
| AQY55115.1 | KY565347_p17 | tail assembly protein | phrog_10344 | minor head protein | head and packaging | 1 | 11162 | 11539 |
| AQY55084.1 | KY565347_p64 | single-stranded DNA protein | singleton | unknown function | unknown function | 1 | 41751 | 42020 |
| ATP06116.1 | KY565347_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46047 | 46250 |
| ATP06112.1 | KY565347_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29330 | 29638 |
| AQY55058.1 | KY565347_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28615 | 28824 |
| AQY55080.1 | KY565347_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40699 | 40845 |
| AQY55071.1 | KY565347_p52 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34238 | 35254 |
| AQY55050.1 | KY565347_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26597 | 26887 |
| ATP06114.1 | KY565347_p63 | membrane protein | singleton | unknown function | unknown function | 1 | 41596 | 41745 |
| AQY55049.1 | KY565347_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26235 | 26489 |
| AQY55125.1 | KY565347_p27 | holin | phrog_199 | holin | lysis | 1 | 23240 | 23671 |
| AQY55082.1 | KY565347_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41343 | 41582 |
| AQY55109.1 | KY565347_p11 | hypothetical protein | phrog_11771 | unknown function | unknown function | 1 | 8283 | 8690 |
| AQY55108.1 | KY565347_p10 | prohead protease | phrog_2932 | head scaffolding protein | head and packaging | 1 | 7441 | 8268 |
| AQY55118.1 | KY565347_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12687 | 13061 |
| AQY55060.1 | KY565347_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29169 | 29330 |
| AQY55116.1 | KY565347_p18 | hypothetical protein | phrog_2175 | protein with Ig domain | other | 1 | 11554 | 12111 |
| AQY55076.1 | KY565347_p57 | replicative DNA helicase | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | 1 | 37942 | 38259 |
| AQY55123.1 | KY565347_p25 | distal tail protein | phrog_12827 | tail protein | tail | 1 | 19283 | 20182 |
| AQY55052.1 | KY565347_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27135 | 27341 |
| AQY55062.1 | KY565347_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29708 | 29839 |