Genomic map of Geobacillus phage TP-84 (KY565347)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY565347
Definition
Geobacillus phage TP-84, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saundersvirus; Geobacillus virus Tp84.
DB of origin
NUCCORE
Length
47703
Host Name
Geobacillus stearothermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
45.54
Number of singletons
38
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQY55063.1 KY565347_p44 hypothetical protein phrog_4223 unknown function unknown function 1 29839 30069
AQY55104.1 KY565347_p6 capsid portal protein phrog_533 portal protein head and packaging 1 3174 4802
AQY55094.1 KY565347_p75 hypothetical protein singleton unknown function unknown function 1 45857 46042
ATP06113.1 KY565347_p47 hypothetical protein phrog_5156 unknown function unknown function 1 30527 32791
AQY55128.1 KY565347_p70 holliday junction-specific endonuclease phrog_843 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 44246 44749
AQY55111.1 KY565347_p13 hypothetical protein singleton unknown function unknown function 1 9802 9996
ATP06115.1 KY565347_p67 dUTP diphosphatase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 43200 43700
AQY55098.1 KY565347_p79 hypothetical protein singleton unknown function unknown function 1 47379 47519
AQY55092.1 KY565347_p73 hypothetical protein singleton unknown function unknown function 1 45546 45659
AQY55100.1 KY565347_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 576 1874
AQY55070.1 KY565347_p51 HTH_XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 34030 34266
AQY55072.1 KY565347_p53 DNA single-strand annealing protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 35270 36289
AQY55113.1 KY565347_p15 hypothetical protein singleton unknown function unknown function 1 10358 10681
AQY55068.1 KY565347_p49 hypothetical protein singleton unknown function unknown function 1 33468 33626
AQY55124.1 KY565347_p26 glycosylase phrog_3432 minor tail protein tail 1 20179 23154
AQY55107.1 KY565347_p9 membrane-associated protein singleton unknown function unknown function 1 7004 7213
AQY55099.1 KY565347_p1 terminase small subunit phrog_6299 terminase small subunit head and packaging 1 13 579
AQY55112.1 KY565347_p14 hypothetical protein phrog_10959 unknown function unknown function 1 10032 10361
AQY55069.1 KY565347_p50 hypothetical protein singleton unknown function unknown function 1 33832 33990
AQY55056.1 KY565347_p38 hypothetical protein singleton unknown function unknown function 1 28090 28290
ATP06111.1 KY565347_p31 membrane protein singleton unknown function unknown function 1 26023 26178
AQY55089.1 KY565347_p69 hypothetical protein singleton unknown function unknown function 1 44014 44259
AQY55101.1 KY565347_p3 hypothetical protein phrog_236 nucleotide kinase other 1 1868 2554
AQY55085.1 KY565347_p65 hypothetical protein singleton unknown function unknown function 1 42023 42205
AQY55079.1 KY565347_p59 HNH homing endonuclease phrog_7370 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40281 40715
AQY55088.1 KY565347_p68 hypothetical protein singleton unknown function unknown function 1 43704 44033
AQY55075.1 KY565347_p56 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 37127 37909
AQY55097.1 KY565347_p78 hypothetical protein phrog_24885 unknown function unknown function 1 46741 47106
AQY55047.1 KY565347_p30 hypothetical protein phrog_38379 unknown function unknown function 1 25329 25901
AQY55053.1 KY565347_p36 hypothetical protein singleton unknown function unknown function 1 27353 27589
AQY55073.1 KY565347_p54 hypothetical protein phrog_31095 unknown function unknown function 1 36337 36558
AQY55090.1 KY565347_p71 hypothetical protein singleton unknown function unknown function 1 44746 45009
AQY55127.1 KY565347_p29 membrane-associated protein singleton unknown function unknown function 1 24877 25077
AQY55117.1 KY565347_p19 hypothetical protein phrog_18220 unknown function unknown function 1 12220 12726
AQY55051.1 KY565347_p34 membrane protein singleton unknown function unknown function 1 26884 27138
AQY55106.1 KY565347_p8 minor capsid protein phrog_4611 minor head protein head and packaging 1 4962 7007
AQY55096.1 KY565347_p77 hypothetical protein phrog_24885 unknown function unknown function 1 46380 46733
AQY55093.1 KY565347_p74 hypothetical protein singleton unknown function unknown function 1 45675 45800
AQY55081.1 KY565347_p61 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 40851 41318
AQY55055.1 KY565347_p37 hypothetical protein singleton unknown function unknown function 1 27698 28093
AQY55086.1 KY565347_p66 thymidylate synthase phrog_24884 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42209 43195
AQY55119.1 KY565347_p21 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 13081 15678
AQY55065.1 KY565347_p46 membrane protein phrog_5422 unknown function unknown function 1 30252 30632
AQY55074.1 KY565347_p55 hypothetical protein singleton unknown function unknown function 1 36924 37106
AQY55114.1 KY565347_p16 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 10671 11159
AQY55122.1 KY565347_p24 hypothetical protein phrog_3473 unknown function unknown function 1 19061 19270
AQY55102.1 KY565347_p4 hypothetical protein singleton unknown function unknown function 1 2586 2939
AQY55091.1 KY565347_p72 hypothetical protein phrog_15234 unknown function unknown function 1 44984 45529
AQY55110.1 KY565347_p12 major capsid protein phrog_29 major head protein head and packaging 1 8736 9728
AQY55126.1 KY565347_p28 endolysin phrog_291 endolysin lysis 1 23676 24860
AQY55121.1 KY565347_p23 tail protein phrog_3475 minor tail protein tail 1 16438 19071
AQY55057.1 KY565347_p39 hypothetical protein phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 1 28403 28618
AQY55078.1 KY565347_p58 hypothetical protein singleton unknown function unknown function 1 39632 40303
AQY55120.1 KY565347_p22 distal tail protein phrog_33 distal tail protein Dit tail 1 15684 16421
AQY55103.1 KY565347_p5 hypothetical protein singleton unknown function unknown function 1 2957 3154
AQY55064.1 KY565347_p45 hypothetical protein singleton unknown function unknown function 1 30071 30283
AQY55067.1 KY565347_p48 hypothetical protein phrog_10569 unknown function unknown function 1 32871 33344
AQY55105.1 KY565347_p7 hypothetical protein singleton unknown function unknown function 1 4799 4945
AQY55115.1 KY565347_p17 tail assembly protein phrog_10344 minor head protein head and packaging 1 11162 11539
AQY55084.1 KY565347_p64 single-stranded DNA protein singleton unknown function unknown function 1 41751 42020
ATP06116.1 KY565347_p76 hypothetical protein singleton unknown function unknown function 1 46047 46250
ATP06112.1 KY565347_p42 hypothetical protein singleton unknown function unknown function 1 29330 29638
AQY55058.1 KY565347_p40 hypothetical protein singleton unknown function unknown function 1 28615 28824
AQY55080.1 KY565347_p60 hypothetical protein singleton unknown function unknown function 1 40699 40845
AQY55071.1 KY565347_p52 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 34238 35254
AQY55050.1 KY565347_p33 hypothetical protein singleton unknown function unknown function 1 26597 26887
ATP06114.1 KY565347_p63 membrane protein singleton unknown function unknown function 1 41596 41745
AQY55049.1 KY565347_p32 hypothetical protein singleton unknown function unknown function 1 26235 26489
AQY55125.1 KY565347_p27 holin phrog_199 holin lysis 1 23240 23671
AQY55082.1 KY565347_p62 hypothetical protein singleton unknown function unknown function 1 41343 41582
AQY55109.1 KY565347_p11 hypothetical protein phrog_11771 unknown function unknown function 1 8283 8690
AQY55108.1 KY565347_p10 prohead protease phrog_2932 head scaffolding protein head and packaging 1 7441 8268
AQY55118.1 KY565347_p20 hypothetical protein singleton unknown function unknown function 1 12687 13061
AQY55060.1 KY565347_p41 hypothetical protein singleton unknown function unknown function 1 29169 29330
AQY55116.1 KY565347_p18 hypothetical protein phrog_2175 protein with Ig domain other 1 11554 12111
AQY55076.1 KY565347_p57 replicative DNA helicase phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 37942 38259
AQY55123.1 KY565347_p25 distal tail protein phrog_12827 tail protein tail 1 19283 20182
AQY55052.1 KY565347_p35 hypothetical protein singleton unknown function unknown function 1 27135 27341
AQY55062.1 KY565347_p43 hypothetical protein singleton unknown function unknown function 1 29708 29839