Genomic map of Vibrio phage pVco-5 (KY612839)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY612839
Definition
Vibrio phage pVco-5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
74325
Host Name
Vibrio
Host domain
Bacteria
Is prophage?
undef
Number of proteins
126
%GC
38.71
Number of singletons
71
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM71093.1 KY612839_p105 hypothetical protein singleton unknown function unknown function -1 46911 47051
ARM71047.1 KY612839_p59 DNA-directed RNA polymerase RNAP1 phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 13225 14178
ARM71023.1 KY612839_p35 hypothetical protein singleton unknown function unknown function 1 7815 7958
ARM71094.1 KY612839_p106 crossover junction endodeoxyribonuclease phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47059 47379
ARM71074.1 KY612839_p86 hypothetical protein phrog_10818 unknown function unknown function -1 27602 32329
ARM71075.1 KY612839_p87 hypothetical protein phrog_16335 ATPase other 1 32521 32913
ARM71087.1 KY612839_p99 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 41433 41900
ARM71017.1 KY612839_p29 hypothetical protein singleton unknown function unknown function 1 6610 6735
ARM71018.1 KY612839_p30 hypothetical protein singleton unknown function unknown function 1 6860 7060
ARM71028.1 KY612839_p40 hypothetical protein singleton unknown function unknown function 1 8944 9135
ARM71063.1 KY612839_p75 hypothetical protein singleton unknown function unknown function 1 21725 21850
ARM71089.1 KY612839_p101 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 42928 45093
ARM71037.1 KY612839_p49 hypothetical protein singleton unknown function unknown function 1 10774 10980
ARM71001.1 KY612839_p13 hypothetical protein singleton unknown function unknown function 1 3401 3538
ARM71002.1 KY612839_p14 hypothetical protein singleton unknown function unknown function 1 3525 3680
ARM71046.1 KY612839_p58 hypothetical protein singleton unknown function unknown function 1 12994 13215
ARM71033.1 KY612839_p45 hypothetical protein singleton unknown function unknown function 1 9965 10168
ARM71021.1 KY612839_p33 hypothetical protein singleton unknown function unknown function 1 7455 7658
ARM70999.1 KY612839_p11 hypothetical protein singleton unknown function unknown function 1 3057 3251
ARM71071.1 KY612839_p83 hypothetical protein phrog_24595 virion structural protein head and packaging -1 26137 27111
ARM71105.1 KY612839_p117 hypothetical protein phrog_2130 unknown function unknown function -1 62638 63234
ARM71049.1 KY612839_p61 DNA-directed RNA polymerase RNAP2 phrog_20599 RNA polymerase DNA, RNA and nucleotide metabolism 1 14806 15255
ARM71008.1 KY612839_p20 hypothetical protein singleton unknown function unknown function 1 4305 4469
ARM71101.1 KY612839_p113 hypothetical protein phrog_17660 unknown function unknown function -1 58025 59161
ARM71040.1 KY612839_p52 hypothetical protein singleton unknown function unknown function 1 11427 11615
ARM71073.1 KY612839_p85 hypothetical protein phrog_34933 unknown function unknown function -1 27301 27609
ARM71014.1 KY612839_p26 hypothetical protein singleton unknown function unknown function 1 5912 6130
ARM71022.1 KY612839_p34 hypothetical protein singleton unknown function unknown function 1 7624 7818
ARM71114.1 KY612839_p126 hypothetical protein singleton unknown function unknown function -1 74160 74291
ARM71062.1 KY612839_p74 hypothetical protein singleton unknown function unknown function 1 21556 21756
ARM71011.1 KY612839_p23 hypothetical protein singleton unknown function unknown function 1 4707 4862
ARM71111.1 KY612839_p123 hypothetical protein singleton unknown function unknown function -1 68629 71901
ARM71102.1 KY612839_p114 hypothetical protein phrog_2646 unknown function unknown function -1 59163 59579
ARM71039.1 KY612839_p51 hypothetical protein singleton unknown function unknown function 1 11191 11403
ARM70993.1 KY612839_p5 hypothetical protein singleton unknown function unknown function 1 1835 1990
ARM71056.1 KY612839_p68 hypothetical protein phrog_18330 unknown function unknown function 1 19040 19468
ARM71107.1 KY612839_p119 hypothetical protein phrog_2120 tail length tape measure protein tail -1 64633 65760
ARM71081.1 KY612839_p93 hypothetical protein singleton unknown function unknown function 1 36204 36392
ARM71092.1 KY612839_p104 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 46189 46947
ARM71003.1 KY612839_p15 hypothetical protein singleton unknown function unknown function 1 3688 3816
ARM71024.1 KY612839_p36 hypothetical protein singleton unknown function unknown function 1 8071 8277
ARM71005.1 KY612839_p17 hypothetical protein singleton unknown function unknown function 1 3930 4088
ARM71078.1 KY612839_p90 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34578 35804
ARM71042.1 KY612839_p54 hypothetical protein phrog_25853 unknown function unknown function 1 11806 11997
ARM71077.1 KY612839_p89 hypothetical protein phrog_1297 ATPase other 1 33791 34525
ARM71009.1 KY612839_p21 hypothetical protein singleton unknown function unknown function 1 4456 4590
ARM71103.1 KY612839_p115 hypothetical protein phrog_2220 unknown function unknown function -1 59587 61761
ARM71057.1 KY612839_p69 hypothetical protein singleton unknown function unknown function 1 19478 19891
ARM71043.1 KY612839_p55 hypothetical protein phrog_18082 unknown function unknown function 1 12120 12359
ARM71088.1 KY612839_p100 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 41910 42917
ARM71015.1 KY612839_p27 hypothetical protein singleton unknown function unknown function 1 6127 6372
ARM71097.1 KY612839_p109 hypothetical protein singleton unknown function unknown function 1 48079 48228
ARM70998.1 KY612839_p10 hypothetical protein singleton unknown function unknown function 1 2885 3097
ARM71041.1 KY612839_p53 hypothetical protein phrog_25853 unknown function unknown function 1 11615 11815
ARM71080.1 KY612839_p92 hypothetical protein singleton unknown function unknown function 1 36034 36207
ARM71029.1 KY612839_p41 hypothetical protein singleton unknown function unknown function 1 9113 9292
ARM71012.1 KY612839_p24 hypothetical protein singleton unknown function unknown function 1 4982 5134
ARM71054.1 KY612839_p66 hypothetical protein phrog_17135 unknown function unknown function 1 18134 18409
ARM71035.1 KY612839_p47 hypothetical protein singleton unknown function unknown function 1 10415 10630
ARM71098.1 KY612839_p110 hypothetical protein singleton unknown function unknown function 1 48271 48477
ARM71051.1 KY612839_p63 DNA-directed RNA polymerase RNAP2 phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 16114 16902
ARM71007.1 KY612839_p19 hypothetical protein singleton unknown function unknown function 1 4181 4339
ARM71020.1 KY612839_p32 hypothetical protein phrog_21645 unknown function unknown function 1 7243 7458
ARM71068.1 KY612839_p80 hypothetical protein singleton unknown function unknown function 1 24516 24656
ARM71013.1 KY612839_p25 hypothetical protein phrog_22423 unknown function unknown function 1 5302 5523
ARM71026.1 KY612839_p38 hypothetical protein singleton unknown function unknown function 1 8499 8795
ARM71065.1 KY612839_p77 hypothetical protein phrog_18142 unknown function unknown function 1 22684 23160
ARM70995.1 KY612839_p7 hypothetical protein singleton unknown function unknown function 1 2262 2453
ARM71090.1 KY612839_p102 hypothetical protein phrog_14094 unknown function unknown function 1 45097 45381
ARM71086.1 KY612839_p98 hypothetical protein phrog_1965 unknown function unknown function 1 40804 41430
ARM71091.1 KY612839_p103 AAA domain protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45385 46119
ARM70997.1 KY612839_p9 hypothetical protein singleton unknown function unknown function 1 2721 2888
ARM71109.1 KY612839_p121 portal protein phrog_1216 portal protein head and packaging -1 66120 68237
ARM71104.1 KY612839_p116 hypothetical protein phrog_2050 virion structural protein head and packaging -1 61820 62632
ARM71016.1 KY612839_p28 hypothetical protein singleton unknown function unknown function 1 6491 6610
ARM71052.1 KY612839_p64 hypothetical protein singleton unknown function unknown function 1 16950 17780
ARM71019.1 KY612839_p31 hypothetical protein phrog_21645 unknown function unknown function 1 7044 7256
ARM71059.1 KY612839_p71 hypothetical protein phrog_26869 unknown function unknown function 1 20254 20430
ARM71067.1 KY612839_p79 hypothetical protein phrog_18469 unknown function unknown function 1 23755 24234
ARM71058.1 KY612839_p70 hypothetical protein singleton unknown function unknown function 1 19872 20177
ARM71100.1 KY612839_p112 virion-encapsulated RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 48734 58021
ARM71085.1 KY612839_p97 hypothetical protein singleton unknown function unknown function 1 40615 40728
ARM71069.1 KY612839_p81 hypothetical protein singleton unknown function unknown function 1 24670 25482
ARM71061.1 KY612839_p73 hypothetical protein phrog_9685 unknown function unknown function 1 21359 21559
ARM71083.1 KY612839_p95 hypothetical protein phrog_16775 unknown function unknown function 1 37540 37986
ARM71044.1 KY612839_p56 hypothetical protein singleton unknown function unknown function 1 12409 12675
ARM71106.1 KY612839_p118 major capsid protein phrog_1357 major head protein head and packaging -1 63297 64613
ARM71031.1 KY612839_p43 hypothetical protein singleton unknown function unknown function 1 9568 9759
ARM71110.1 KY612839_p122 hypothetical protein phrog_18138 unknown function unknown function 1 68307 68597
ARM71096.1 KY612839_p108 hypothetical protein singleton unknown function unknown function 1 47979 48095
ARM71076.1 KY612839_p88 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33051 33617
ARM70990.1 KY612839_p2 hypothetical protein phrog_25798 unknown function unknown function 1 737 925
ARM71072.1 KY612839_p84 hypothetical protein singleton unknown function unknown function -1 27122 27259
ARM70996.1 KY612839_p8 hypothetical protein singleton unknown function unknown function 1 2437 2634
ARM70989.1 KY612839_p1 hypothetical protein phrog_2109 unknown function unknown function -1 10 696
ARM71038.1 KY612839_p50 hypothetical protein singleton unknown function unknown function 1 10977 11180
ARM71070.1 KY612839_p82 hypothetical protein phrog_6596 unknown function unknown function 1 25529 25990
ARM71064.1 KY612839_p76 hypothetical protein singleton unknown function unknown function 1 22311 22637
ARM71084.1 KY612839_p96 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 38115 40622
ARM71032.1 KY612839_p44 hypothetical protein singleton unknown function unknown function 1 9750 9968
ARM70992.1 KY612839_p4 hypothetical protein phrog_3600 antimicrobial peptide resistance and lipid A acylation protein PagP moron, auxiliary metabolic gene and host takeover 1 1203 1838
ARM71079.1 KY612839_p91 hypothetical protein singleton unknown function unknown function 1 35806 35988
ARM71108.1 KY612839_p120 hypothetical protein singleton unknown function unknown function -1 65764 66114
ARM71112.1 KY612839_p124 hypothetical protein phrog_2125 virion structural protein head and packaging -1 71898 72587
ARM71034.1 KY612839_p46 hypothetical protein singleton unknown function unknown function 1 10146 10418
ARM70994.1 KY612839_p6 hypothetical protein singleton unknown function unknown function 1 2089 2265
ARM71060.1 KY612839_p72 hypothetical protein phrog_9325 unknown function unknown function 1 20547 21155
ARM71050.1 KY612839_p62 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 15397 15945
ARM71055.1 KY612839_p67 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis -1 18468 18989
ARM71095.1 KY612839_p107 hypothetical protein singleton unknown function unknown function 1 47379 47870
ARM71036.1 KY612839_p48 hypothetical protein singleton unknown function unknown function 1 10707 10823
ARM71006.1 KY612839_p18 hypothetical protein singleton unknown function unknown function 1 4051 4203
ARM71053.1 KY612839_p65 hypothetical protein phrog_25910 unknown function unknown function 1 17916 18158
ARM71030.1 KY612839_p42 hypothetical protein singleton unknown function unknown function 1 9283 9450
ARM71045.1 KY612839_p57 hypothetical protein phrog_17814 unknown function unknown function 1 12685 12945
ARM71082.1 KY612839_p94 hypothetical protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 36385 37539
ARM71066.1 KY612839_p78 hypothetical protein singleton unknown function unknown function 1 23551 23691
ARM71113.1 KY612839_p125 terminase large subunit phrog_38 terminase large subunit head and packaging -1 72581 74170
ARM71027.1 KY612839_p39 hypothetical protein singleton unknown function unknown function 1 8785 8898
ARM71025.1 KY612839_p37 hypothetical protein singleton unknown function unknown function 1 8326 8502
ARM70991.1 KY612839_p3 hypothetical protein singleton unknown function unknown function 1 995 1189
ARM71048.1 KY612839_p60 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 14160 14783
ARM71099.1 KY612839_p111 hypothetical protein singleton unknown function unknown function 1 48487 48705
ARM71010.1 KY612839_p22 hypothetical protein singleton unknown function unknown function 1 4577 4720
ARM71004.1 KY612839_p16 hypothetical protein singleton unknown function unknown function 1 3791 3943
ARM71000.1 KY612839_p12 hypothetical protein singleton unknown function unknown function 1 3238 3435