Genomic map of Pseudomonas phage PAXYB1 (KY618819)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY618819
Definition
Pseudomonas phage PAXYB1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus PAXYB1.
DB of origin
NUCCORE
Length
43337
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
62.28
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB06186.1 KY618819_p9 hypothetical protein phrog_7027 unknown function unknown function 1 3563 3790
ARB06201.1 KY618819_p24 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9757 10377
ARB06180.1 KY618819_p3 hypothetical protein phrog_5722 unknown function unknown function 1 1779 2063
ARB06204.1 KY618819_p27 hypothetical protein phrog_7292 unknown function unknown function 1 11602 11922
ARB06231.1 KY618819_p54 DNA maturase B phrog_38 terminase large subunit head and packaging 1 39300 41105
ARB06219.1 KY618819_p42 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23863 24831
ARB06194.1 KY618819_p17 DNA-binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5849 6712
ARB06183.1 KY618819_p6 hypothetical protein phrog_18183 unknown function unknown function 1 2903 3007
ARB06212.1 KY618819_p35 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 18542 18706
ARB06182.1 KY618819_p5 hypothetical protein phrog_1448 unknown function unknown function 1 2301 2840
ARB06197.1 KY618819_p20 hypothetical protein phrog_9768 unknown function unknown function 1 7513 7638
ARB06190.1 KY618819_p13 hypothetical protein phrog_4955 unknown function unknown function 1 4432 4668
ARB06227.1 KY618819_p50 tail fiber protein phrog_8874 tail fiber protein tail 1 37021 37479
ARB06205.1 KY618819_p28 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11919 14342
ARB06228.1 KY618819_p51 tail fiber protein phrog_4176 tail fiber protein tail 1 37472 38377
ARB06235.1 KY618819_p58 Rz1 protein phrog_456 Rz-like spanin lysis 1 41956 42156
ARB06237.1 KY618819_p60 structural protein phrog_7171 minor head protein head and packaging 1 42522 42716
ARB06236.1 KY618819_p59 structural protein phrog_6908 minor head protein head and packaging 1 42158 42472
ARB06230.1 KY618819_p53 DNA maturase A phrog_891 terminase small subunit head and packaging 1 38986 39291
ARB06215.1 KY618819_p38 hypothetical protein phrog_3986 unknown function unknown function 1 21601 22074
ARB06223.1 KY618819_p46 internal virion protein phrog_805 internal virion protein head and packaging 1 29006 29551
ARB06206.1 KY618819_p29 hypothetical protein phrog_5437 unknown function unknown function 1 14339 14650
ARB06213.1 KY618819_p36 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18715 21162
ARB06200.1 KY618819_p23 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8499 9767
ARB06221.1 KY618819_p44 tail tubular protein A phrog_446 tail protein tail 1 25969 26523
ARB06179.1 KY618819_p2 hypothetical protein phrog_21618 unknown function unknown function 1 942 1295
ARB06203.1 KY618819_p26 hypothetical protein phrog_19207 unknown function unknown function 1 11321 11605
ARB06196.1 KY618819_p19 hypothetical protein phrog_2563 unknown function unknown function 1 6981 7520
ARB06226.1 KY618819_p49 tail fiber protein phrog_6953 tail fiber protein tail 1 36266 37021
ARB06218.1 KY618819_p41 head-tail connector protein phrog_449 head-tail adaptor connector 1 22327 23859
ARB06184.1 KY618819_p7 hypothetical protein phrog_12691 unknown function unknown function 1 3010 3129
ARB06210.1 KY618819_p33 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 17122 18168
ARB06185.1 KY618819_p8 hypothetical protein phrog_6951 unknown function unknown function 1 3208 3576
ARB06202.1 KY618819_p25 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10377 11324
ARB06229.1 KY618819_p52 tail fiber protein phrog_4950 tail fiber protein tail 1 38381 38986
ARB06209.1 KY618819_p32 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16685 17125
ARB06191.1 KY618819_p14 hypothetical protein phrog_4342 unknown function unknown function 1 4684 4977
ARB06207.1 KY618819_p30 hypothetical protein phrog_862 unknown function unknown function 1 14705 15754
ARB06211.1 KY618819_p34 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 18178 18552
ARB06222.1 KY618819_p45 tail tubular protein B phrog_457 tail protein tail 1 26526 29006
ARB06233.1 KY618819_p56 endolysin phrog_7 endolysin lysis 1 41299 41781
ARB06181.1 KY618819_p4 hypothetical protein phrog_7124 unknown function unknown function 1 2063 2290
ARB06217.1 KY618819_p40 hypothetical protein phrog_18808 unknown function unknown function 1 22236 22466
ARB06187.1 KY618819_p10 hypothetical protein phrog_21702 unknown function unknown function 1 3787 3972
ARB06195.1 KY618819_p18 hypothetical protein phrog_9409 unknown function unknown function 1 6791 7210
ARB06216.1 KY618819_p39 hypothetical protein phrog_3112 virion structural protein head and packaging 1 22019 22315
ARB06198.1 KY618819_p21 hypothetical protein phrog_23126 unknown function unknown function 1 7530 7733
ARB06199.1 KY618819_p22 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7706 8530
ARB06192.1 KY618819_p15 hypothetical protein phrog_5433 unknown function unknown function 1 5056 5472
ARB06188.1 KY618819_p11 hypothetical protein phrog_8496 unknown function unknown function 1 3969 4148
ARB06225.1 KY618819_p48 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32251 36264
ARB06193.1 KY618819_p16 hypothetical protein phrog_6915 unknown function unknown function 1 5541 5900
ARB06189.1 KY618819_p12 hypothetical protein phrog_4342 unknown function unknown function 1 4148 4435
ARB06214.1 KY618819_p37 hypothetical protein phrog_6575 unknown function unknown function 1 21350 21601
ARB06178.1 KY618819_p1 hypothetical protein singleton unknown function unknown function 1 727 960
ARB06224.1 KY618819_p47 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29551 32247
ARB06220.1 KY618819_p43 capsid protein phrog_267 major head protein head and packaging 1 24884 25891
ARB06234.1 KY618819_p57 Rz protein phrog_214 Rz-like spanin lysis 1 41739 42068
ARB06232.1 KY618819_p55 holin phrog_6597 holin lysis 1 41102 41302
ARB06208.1 KY618819_p31 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15754 16695