Genomic map of Corynebacterium phage LGCM-V4 (KY624611)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY624611
Definition
Corynebacterium phage LGCM-V4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
36674
Host Name
Corynebacterium pseudotuberculosis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
51.04
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM68649.1 KY624611_p21 hypothetical protein phrog_12885 unknown function unknown function 1 11736 12353
ARM68670.1 KY624611_p42 hypothetical protein phrog_18185 tail fiber protein tail 1 30225 31601
ARM68631.1 KY624611_p3 integrase phrog_1 integrase integration and excision -1 1280 2545
ARM68661.1 KY624611_p33 hypothetical protein phrog_123 tail terminator connector 1 19651 20028
ARM68664.1 KY624611_p36 hypothetical protein singleton unknown function unknown function 1 21638 21847
ARM68657.1 KY624611_p29 hypothetical protein phrog_26345 unknown function unknown function 1 18368 18538
ARM68639.1 KY624611_p11 transcriptional regulator phrog_9103 transcriptional repressor transcription regulation 1 6114 6350
ARM68658.1 KY624611_p30 hypothetical protein phrog_442 head-tail adaptor connector 1 18561 19043
ARM68677.1 KY624611_p49 hypothetical protein phrog_25215 unknown function unknown function 1 34868 36550
ARM68636.1 KY624611_p8 hypothetical protein singleton unknown function unknown function -1 4881 4994
ARM68638.1 KY624611_p10 hypothetical protein phrog_16278 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 5505 5996
ARM68635.1 KY624611_p7 hypothetical protein singleton unknown function unknown function -1 4660 4806
ARM68667.1 KY624611_p39 immunity-specific protein phrog_106 minor tail protein tail 1 27531 28322
ARM68674.1 KY624611_p46 hypothetical protein phrog_443 holin lysis 1 33482 33721
ARM68641.1 KY624611_p13 hypothetical protein singleton unknown function unknown function -1 7078 7251
ARM68650.1 KY624611_p22 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12441 12722
ARM68671.1 KY624611_p43 hypothetical protein singleton unknown function unknown function 1 31605 31781
ARM68676.1 KY624611_p48 secreted protein phrog_11860 unknown function unknown function 1 34185 34523
ARM68675.1 KY624611_p47 membrane protein phrog_4026 minor tail protein tail 1 33724 34188
ARM68673.1 KY624611_p45 teichoic acid phosphorylcholine esterase/choline binding protein E phrog_14048 endolysin lysis 1 32745 33482
ARM68629.1 KY624611_p1 hypothetical protein phrog_31673 unknown function unknown function 1 212 826
ARM68668.1 KY624611_p40 immunity-specific protein phrog_16996 unknown function unknown function 1 28363 29145
ARM68666.1 KY624611_p38 hypothetical protein phrog_8927 tail length tape measure protein tail 1 22509 27521
ARM68659.1 KY624611_p31 hypothetical protein phrog_501 head closure Hc1 connector 1 19040 19402
ARM68653.1 KY624611_p25 hypothetical protein singleton unknown function unknown function 1 14651 14824
ARM68665.1 KY624611_p37 hypothetical protein singleton unknown function unknown function 1 21857 22546
ARM68651.1 KY624611_p23 hypothetical protein phrog_10594 unknown function unknown function 1 12839 13231
ARM68640.1 KY624611_p12 hypothetical protein singleton unknown function unknown function 1 6399 6659
ARM68660.1 KY624611_p32 hypothetical protein phrog_5837 head closure Hc1 connector 1 19395 19661
ARM68633.1 KY624611_p5 hypothetical protein phrog_3162 unknown function unknown function -1 3516 4322
ARM68655.1 KY624611_p27 capsid and scaffold protein phrog_9644 head maturation protease head and packaging 1 16075 17121
ARM68669.1 KY624611_p41 immunity-specific protein phrog_20692 unknown function unknown function 1 29146 30225
ARM68663.1 KY624611_p35 hypothetical protein phrog_5010 tail assembly chaperone tail 1 21099 21476
ARM68630.1 KY624611_p2 hypothetical protein singleton unknown function unknown function 1 1007 1249
ARM68647.1 KY624611_p19 hypothetical protein phrog_20527 unknown function unknown function 1 9555 10301
ARM68648.1 KY624611_p20 hypothetical protein phrog_16726 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10459 11505
ARM68654.1 KY624611_p26 portal protein phrog_12 portal protein head and packaging 1 14837 16078
ARM68637.1 KY624611_p9 hypothetical protein phrog_87 metallo-protease other -1 5088 5495
ARM68672.1 KY624611_p44 hypothetical protein singleton unknown function unknown function 1 32050 32637
ARM68634.1 KY624611_p6 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 4433 4657
ARM68662.1 KY624611_p34 hypothetical protein phrog_476 major tail protein tail 1 20057 21004
ARM68652.1 KY624611_p24 hypothetical protein phrog_9 terminase large subunit head and packaging 1 13221 14615
ARM68632.1 KY624611_p4 hypothetical protein singleton unknown function unknown function -1 2675 3514
ARM68642.1 KY624611_p14 hypothetical protein singleton unknown function unknown function 1 7362 7583
ARM68645.1 KY624611_p17 hypothetical protein phrog_27182 unknown function unknown function 1 8903 9127
ARM68656.1 KY624611_p28 major capsid protein phrog_10 major head protein head and packaging 1 17118 18368
ARM68643.1 KY624611_p15 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 7610 8431
ARM68646.1 KY624611_p18 hypothetical protein singleton unknown function unknown function -1 9388 9501
ARM68644.1 KY624611_p16 hypothetical protein phrog_22556 unknown function unknown function 1 8646 8879