| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY626162 |
Definition |
Salmonella phage Si3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus Si3. |
DB of origin |
NUCCORE |
Length |
84419 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
119 |
%GC |
39.01 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARK07248.1 | KY626162_p3 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 5490 | 6224 |
| ARK07274.1 | KY626162_p29 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 26116 | 27282 |
| ARK07364.1 | KY626162_p119 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 83339 | 83929 |
| ARK07342.1 | KY626162_p97 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 70624 | 71403 |
| ARK07354.1 | KY626162_p109 | hypothetical protein | phrog_4343 | unknown function | unknown function | -1 | 78726 | 79229 |
| ARK07310.1 | KY626162_p65 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 49705 | 50043 |
| ARK07329.1 | KY626162_p84 | hypothetical protein | phrog_4262 | unknown function | unknown function | 1 | 63176 | 63511 |
| ARK07269.1 | KY626162_p24 | baseplate protein | phrog_11 | baseplate spike | tail | 1 | 22440 | 23063 |
| ARK07291.1 | KY626162_p46 | hypothetical protein | phrog_2381 | unknown function | unknown function | -1 | 35882 | 36028 |
| ARK07253.1 | KY626162_p8 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 10427 | 10759 |
| ARK07309.1 | KY626162_p64 | hypothetical protein | phrog_4007 | unknown function | unknown function | 1 | 49389 | 49712 |
| ARK07328.1 | KY626162_p83 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 61341 | 63122 |
| ARK07348.1 | KY626162_p103 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 74333 | 74605 |
| ARK07351.1 | KY626162_p106 | hypothetical protein | phrog_4559 | unknown function | unknown function | 1 | 75763 | 76011 |
| ARK07268.1 | KY626162_p23 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 21463 | 22440 |
| ARK07347.1 | KY626162_p102 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74072 | 74242 |
| ARK07363.1 | KY626162_p118 | hypothetical protein | phrog_4463 | unknown function | unknown function | -1 | 82921 | 83292 |
| ARK07300.1 | KY626162_p55 | hypothetical protein | phrog_4469 | unknown function | unknown function | 1 | 42814 | 43008 |
| ARK07334.1 | KY626162_p89 | hypothetical protein | phrog_3970 | polynucleotide kinase | other | 1 | 67880 | 68575 |
| ARK07298.1 | KY626162_p53 | minor tail protein | phrog_4251 | minor tail protein | tail | 1 | 41194 | 41994 |
| ARK07290.1 | KY626162_p45 | hypothetical protein | phrog_902 | unknown function | unknown function | -1 | 35635 | 35892 |
| ARK07265.1 | KY626162_p20 | tail length tape-measure protein | phrog_4036 | tail length tape measure protein | tail | 1 | 18097 | 20325 |
| ARK07346.1 | KY626162_p101 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 73021 | 73533 |
| ARK07293.1 | KY626162_p48 | hypothetical protein | phrog_5180 | unknown function | unknown function | -1 | 36240 | 36419 |
| ARK07278.1 | KY626162_p33 | hypothetical protein | phrog_4038 | unknown function | unknown function | 1 | 29951 | 30316 |
| ARK07361.1 | KY626162_p116 | lysin | phrog_7 | endolysin | lysis | -1 | 81576 | 82040 |
| ARK07362.1 | KY626162_p117 | hypothetical protein | phrog_3995 | tail protein | tail | -1 | 82040 | 82924 |
| ARK07307.1 | KY626162_p62 | hypothetical protein | phrog_4442 | unknown function | unknown function | 1 | 48429 | 48677 |
| ARK07349.1 | KY626162_p104 | hypothetical protein | phrog_4327 | unknown function | unknown function | 1 | 74691 | 75095 |
| ARK07280.1 | KY626162_p35 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 31260 | 31805 |
| ARK07294.1 | KY626162_p49 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36501 | 36854 |
| ARK07276.1 | KY626162_p31 | tail fibers protein | phrog_2097 | tail fiber protein | tail | 1 | 28741 | 29676 |
| ARK07306.1 | KY626162_p61 | hypothetical protein | phrog_447 | NAD synthetase | other | 1 | 47907 | 48407 |
| ARK07356.1 | KY626162_p111 | hypothetical protein | phrog_4109 | unknown function | unknown function | -1 | 79528 | 80109 |
| ARK07287.1 | KY626162_p42 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 34125 | 35228 |
| ARK07344.1 | KY626162_p99 | hypothetical protein | phrog_4495 | unknown function | unknown function | 1 | 72173 | 72553 |
| ARK07258.1 | KY626162_p13 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 14114 | 14596 |
| ARK07286.1 | KY626162_p41 | hypothetical protein | phrog_4332 | unknown function | unknown function | -1 | 33459 | 33842 |
| ARK07345.1 | KY626162_p100 | hypothetical protein | phrog_5089 | unknown function | unknown function | 1 | 72643 | 72933 |
| ARK07312.1 | KY626162_p67 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 52467 | 52637 |
| ARK07252.1 | KY626162_p7 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 9927 | 10427 |
| ARK07357.1 | KY626162_p112 | hypothetical protein | phrog_4040 | unknown function | unknown function | -1 | 80109 | 80453 |
| ARK07259.1 | KY626162_p14 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 14593 | 14994 |
| ARK07360.1 | KY626162_p115 | hypothetical protein | phrog_4266 | unknown function | unknown function | -1 | 81127 | 81525 |
| ARK07264.1 | KY626162_p19 | hypothetical protein | phrog_4963 | tail assembly chaperone | tail | 1 | 17858 | 18097 |
| ARK07315.1 | KY626162_p70 | hypothetical protein | phrog_4532 | unknown function | unknown function | 1 | 53942 | 54148 |
| ARK07296.1 | KY626162_p51 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 38330 | 40513 |
| ARK07303.1 | KY626162_p58 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 45461 | 46324 |
| ARK07322.1 | KY626162_p77 | hypothetical protein | phrog_4425 | unknown function | unknown function | 1 | 58515 | 58772 |
| ARK07289.1 | KY626162_p44 | hypothetical protein | phrog_4427 | unknown function | unknown function | -1 | 35418 | 35624 |
| ARK07311.1 | KY626162_p66 | ribonucleotide reductase of class Ia (aerobic), alpha subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 50090 | 52324 |
| ARK07285.1 | KY626162_p40 | hypothetical protein | phrog_4473 | unknown function | unknown function | -1 | 33245 | 33457 |
| ARK07337.1 | KY626162_p92 | hypothetical protein | phrog_4180 | unknown function | unknown function | 1 | 69416 | 69613 |
| ARK07267.1 | KY626162_p22 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 21122 | 21463 |
| ARK07284.1 | KY626162_p39 | hypothetical protein | phrog_1373 | transcriptional regulator | transcription regulation | -1 | 32953 | 33252 |
| ARK07340.1 | KY626162_p95 | hypothetical protein | phrog_13034 | unknown function | unknown function | 1 | 70183 | 70410 |
| ARK07359.1 | KY626162_p114 | D-alanyl-D-alanine carboxypeptidase | phrog_4348 | unknown function | unknown function | -1 | 80739 | 81134 |
| ARK07305.1 | KY626162_p60 | hypothetical protein | phrog_33760 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47734 | 47910 |
| ARK07308.1 | KY626162_p63 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 48653 | 49408 |
| ARK07324.1 | KY626162_p79 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 59147 | 59662 |
| ARK07304.1 | KY626162_p59 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 46387 | 47433 |
| ARK07273.1 | KY626162_p28 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 25811 | 26113 |
| ARK07316.1 | KY626162_p71 | ribonucleotide reductase of class III (anaerobic), large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 54197 | 55396 |
| ARK07251.1 | KY626162_p6 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 8461 | 9927 |
| ARK07343.1 | KY626162_p98 | hypothetical protein | phrog_5293 | unknown function | unknown function | 1 | 71878 | 72084 |
| ARK07335.1 | KY626162_p90 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 68586 | 69050 |
| ARK07339.1 | KY626162_p94 | hypothetical protein | phrog_4453 | unknown function | unknown function | 1 | 69882 | 70205 |
| ARK07299.1 | KY626162_p54 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 42056 | 42799 |
| ARK07282.1 | KY626162_p37 | hypothetical protein | phrog_4422 | unknown function | unknown function | -1 | 32063 | 32578 |
| ARK07355.1 | KY626162_p110 | hypothetical protein | phrog_4459 | unknown function | unknown function | -1 | 79226 | 79444 |
| ARK07247.1 | KY626162_p2 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 573 | 1988 |
| ARK07321.1 | KY626162_p76 | hypothetical protein | phrog_5082 | unknown function | unknown function | 1 | 58171 | 58548 |
| ARK07332.1 | KY626162_p87 | rIIB lysis inhibitor | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 66144 | 67253 |
| ARK07297.1 | KY626162_p52 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 40770 | 41192 |
| ARK07277.1 | KY626162_p32 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 29837 | 29950 |
| ARK07330.1 | KY626162_p85 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 63493 | 63669 |
| ARK07279.1 | KY626162_p34 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 30359 | 31258 |
| ARK07350.1 | KY626162_p105 | hypothetical protein | phrog_4318 | unknown function | unknown function | 1 | 75199 | 75546 |
| ARK07275.1 | KY626162_p30 | tail fibers protein | phrog_4277 | tail fiber protein | tail | 1 | 27333 | 28694 |
| ARK07261.1 | KY626162_p16 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 15569 | 16921 |
| ARK07333.1 | KY626162_p88 | hypothetical protein | phrog_600 | unknown function | unknown function | 1 | 67354 | 67902 |
| ARK07317.1 | KY626162_p72 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55509 | 55973 |
| ARK07352.1 | KY626162_p107 | hypothetical protein | phrog_4330 | unknown function | unknown function | -1 | 77819 | 78370 |
| ARK07325.1 | KY626162_p80 | hypothetical protein | phrog_4726 | unknown function | unknown function | 1 | 59655 | 59933 |
| ARK07254.1 | KY626162_p9 | head-tail preconnector protein | phrog_53 | head maturation protease | head and packaging | 1 | 10771 | 12117 |
| ARK07323.1 | KY626162_p78 | hypothetical protein | phrog_4462 | unknown function | unknown function | 1 | 58775 | 59095 |
| ARK07313.1 | KY626162_p68 | ribonucleotide reductase of class Ia (aerobic), beta subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 52634 | 53707 |
| ARK07353.1 | KY626162_p108 | hypothetical protein | phrog_4457 | unknown function | unknown function | -1 | 78425 | 78649 |
| ARK07266.1 | KY626162_p21 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 20325 | 21122 |
| ARK07250.1 | KY626162_p5 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 6843 | 8444 |
| ARK07326.1 | KY626162_p81 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 59945 | 60826 |
| ARK07320.1 | KY626162_p75 | ribonucleotide reductase of class III (anaerobic), activating protein | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 57723 | 58208 |
| ARK07336.1 | KY626162_p91 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | 1 | 69103 | 69450 |
| ARK07256.1 | KY626162_p11 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 12540 | 13616 |
| ARK07246.1 | KY626162_p1 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 119 | 490 |
| ARK07270.1 | KY626162_p25 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 23063 | 23482 |
| ARK07281.1 | KY626162_p36 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 31802 | 32062 |
| ARK07302.1 | KY626162_p57 | hypothetical protein | phrog_4424 | unknown function | unknown function | 1 | 45239 | 45388 |
| ARK07260.1 | KY626162_p15 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 14969 | 15568 |
| ARK07262.1 | KY626162_p17 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 16937 | 17383 |
| ARK07272.1 | KY626162_p27 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 24954 | 25811 |
| ARK07327.1 | KY626162_p82 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60835 | 61326 |
| ARK07358.1 | KY626162_p113 | hypothetical protein | phrog_4385 | unknown function | unknown function | -1 | 80446 | 80739 |
| ARK07292.1 | KY626162_p47 | hypothetical protein | phrog_4230 | unknown function | unknown function | -1 | 36025 | 36243 |
| ARK07271.1 | KY626162_p26 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 23482 | 24951 |
| ARK07314.1 | KY626162_p69 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 53707 | 53949 |
| ARK07255.1 | KY626162_p10 | hypothetical protein | phrog_4146 | tail protease | other | 1 | 12129 | 12506 |
| ARK07257.1 | KY626162_p12 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 13668 | 14114 |
| ARK07295.1 | KY626162_p50 | DNA polymerase | phrog_6375 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37013 | 37567 |
| ARK07301.1 | KY626162_p56 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 43001 | 44986 |
| ARK07249.1 | KY626162_p4 | hypothetical protein | phrog_4397 | unknown function | unknown function | 1 | 6621 | 6821 |
| ARK07331.1 | KY626162_p86 | rIIA lysis inhibitor | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 63698 | 66064 |
| ARK07288.1 | KY626162_p43 | hypothetical protein | phrog_5768 | unknown function | unknown function | -1 | 35230 | 35421 |
| ARK07318.1 | KY626162_p73 | ribonucleotide reductase of class III (anaerobic), large subunit | phrog_4218 | anaerobic ribonucleoside reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 56217 | 57083 |
| ARK07283.1 | KY626162_p38 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 32592 | 32951 |
| ARK07338.1 | KY626162_p93 | hypothetical protein | phrog_4391 | unknown function | unknown function | 1 | 69610 | 69879 |
| ARK07263.1 | KY626162_p18 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 17457 | 17855 |
| ARK07341.1 | KY626162_p96 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 70423 | 70623 |
| ARK07319.1 | KY626162_p74 | homing endonuclease | phrog_655 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57091 | 57648 |