Genomic map of Salmonella phage Si3 (KY626162)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY626162
Definition
Salmonella phage Si3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus; Salmonella virus Si3.
DB of origin
NUCCORE
Length
84419
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
119
%GC
39.01
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARK07248.1 KY626162_p3 hypothetical protein phrog_2114 unknown function unknown function 1 5490 6224
ARK07274.1 KY626162_p29 tail fiber protein phrog_2097 tail fiber protein tail 1 26116 27282
ARK07364.1 KY626162_p119 hypothetical protein phrog_4034 unknown function unknown function -1 83339 83929
ARK07342.1 KY626162_p97 hypothetical protein phrog_335 phosphatase other 1 70624 71403
ARK07354.1 KY626162_p109 hypothetical protein phrog_4343 unknown function unknown function -1 78726 79229
ARK07310.1 KY626162_p65 hypothetical protein phrog_3358 unknown function unknown function 1 49705 50043
ARK07329.1 KY626162_p84 hypothetical protein phrog_4262 unknown function unknown function 1 63176 63511
ARK07269.1 KY626162_p24 baseplate protein phrog_11 baseplate spike tail 1 22440 23063
ARK07291.1 KY626162_p46 hypothetical protein phrog_2381 unknown function unknown function -1 35882 36028
ARK07253.1 KY626162_p8 hypothetical protein phrog_240 head protein head and packaging 1 10427 10759
ARK07309.1 KY626162_p64 hypothetical protein phrog_4007 unknown function unknown function 1 49389 49712
ARK07328.1 KY626162_p83 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 61341 63122
ARK07348.1 KY626162_p103 hypothetical protein phrog_3436 unknown function unknown function 1 74333 74605
ARK07351.1 KY626162_p106 hypothetical protein phrog_4559 unknown function unknown function 1 75763 76011
ARK07268.1 KY626162_p23 hypothetical protein phrog_196 baseplate hub tail 1 21463 22440
ARK07347.1 KY626162_p102 hypothetical protein singleton unknown function unknown function 1 74072 74242
ARK07363.1 KY626162_p118 hypothetical protein phrog_4463 unknown function unknown function -1 82921 83292
ARK07300.1 KY626162_p55 hypothetical protein phrog_4469 unknown function unknown function 1 42814 43008
ARK07334.1 KY626162_p89 hypothetical protein phrog_3970 polynucleotide kinase other 1 67880 68575
ARK07298.1 KY626162_p53 minor tail protein phrog_4251 minor tail protein tail 1 41194 41994
ARK07290.1 KY626162_p45 hypothetical protein phrog_902 unknown function unknown function -1 35635 35892
ARK07265.1 KY626162_p20 tail length tape-measure protein phrog_4036 tail length tape measure protein tail 1 18097 20325
ARK07346.1 KY626162_p101 hypothetical protein phrog_4190 unknown function unknown function 1 73021 73533
ARK07293.1 KY626162_p48 hypothetical protein phrog_5180 unknown function unknown function -1 36240 36419
ARK07278.1 KY626162_p33 hypothetical protein phrog_4038 unknown function unknown function 1 29951 30316
ARK07361.1 KY626162_p116 lysin phrog_7 endolysin lysis -1 81576 82040
ARK07362.1 KY626162_p117 hypothetical protein phrog_3995 tail protein tail -1 82040 82924
ARK07307.1 KY626162_p62 hypothetical protein phrog_4442 unknown function unknown function 1 48429 48677
ARK07349.1 KY626162_p104 hypothetical protein phrog_4327 unknown function unknown function 1 74691 75095
ARK07280.1 KY626162_p35 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 31260 31805
ARK07294.1 KY626162_p49 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 36501 36854
ARK07276.1 KY626162_p31 tail fibers protein phrog_2097 tail fiber protein tail 1 28741 29676
ARK07306.1 KY626162_p61 hypothetical protein phrog_447 NAD synthetase other 1 47907 48407
ARK07356.1 KY626162_p111 hypothetical protein phrog_4109 unknown function unknown function -1 79528 80109
ARK07287.1 KY626162_p42 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 34125 35228
ARK07344.1 KY626162_p99 hypothetical protein phrog_4495 unknown function unknown function 1 72173 72553
ARK07258.1 KY626162_p13 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 14114 14596
ARK07286.1 KY626162_p41 hypothetical protein phrog_4332 unknown function unknown function -1 33459 33842
ARK07345.1 KY626162_p100 hypothetical protein phrog_5089 unknown function unknown function 1 72643 72933
ARK07312.1 KY626162_p67 hypothetical protein phrog_2652 unknown function unknown function 1 52467 52637
ARK07252.1 KY626162_p7 hypothetical protein phrog_3977 unknown function unknown function 1 9927 10427
ARK07357.1 KY626162_p112 hypothetical protein phrog_4040 unknown function unknown function -1 80109 80453
ARK07259.1 KY626162_p14 hypothetical protein phrog_2874 unknown function unknown function 1 14593 14994
ARK07360.1 KY626162_p115 hypothetical protein phrog_4266 unknown function unknown function -1 81127 81525
ARK07264.1 KY626162_p19 hypothetical protein phrog_4963 tail assembly chaperone tail 1 17858 18097
ARK07315.1 KY626162_p70 hypothetical protein phrog_4532 unknown function unknown function 1 53942 54148
ARK07296.1 KY626162_p51 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 38330 40513
ARK07303.1 KY626162_p58 hypothetical protein phrog_3877 unknown function unknown function 1 45461 46324
ARK07322.1 KY626162_p77 hypothetical protein phrog_4425 unknown function unknown function 1 58515 58772
ARK07289.1 KY626162_p44 hypothetical protein phrog_4427 unknown function unknown function -1 35418 35624
ARK07311.1 KY626162_p66 ribonucleotide reductase of class Ia (aerobic), alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 50090 52324
ARK07285.1 KY626162_p40 hypothetical protein phrog_4473 unknown function unknown function -1 33245 33457
ARK07337.1 KY626162_p92 hypothetical protein phrog_4180 unknown function unknown function 1 69416 69613
ARK07267.1 KY626162_p22 hypothetical protein phrog_349 virion structural protein head and packaging 1 21122 21463
ARK07284.1 KY626162_p39 hypothetical protein phrog_1373 transcriptional regulator transcription regulation -1 32953 33252
ARK07340.1 KY626162_p95 hypothetical protein phrog_13034 unknown function unknown function 1 70183 70410
ARK07359.1 KY626162_p114 D-alanyl-D-alanine carboxypeptidase phrog_4348 unknown function unknown function -1 80739 81134
ARK07305.1 KY626162_p60 hypothetical protein phrog_33760 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47734 47910
ARK07308.1 KY626162_p63 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 48653 49408
ARK07324.1 KY626162_p79 hypothetical protein phrog_3500 unknown function unknown function 1 59147 59662
ARK07304.1 KY626162_p59 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 46387 47433
ARK07273.1 KY626162_p28 hypothetical protein phrog_4141 unknown function unknown function 1 25811 26113
ARK07316.1 KY626162_p71 ribonucleotide reductase of class III (anaerobic), large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 54197 55396
ARK07251.1 KY626162_p6 hypothetical protein phrog_113 portal protein head and packaging 1 8461 9927
ARK07343.1 KY626162_p98 hypothetical protein phrog_5293 unknown function unknown function 1 71878 72084
ARK07335.1 KY626162_p90 hypothetical protein phrog_2267 unknown function unknown function 1 68586 69050
ARK07339.1 KY626162_p94 hypothetical protein phrog_4453 unknown function unknown function 1 69882 70205
ARK07299.1 KY626162_p54 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 42056 42799
ARK07282.1 KY626162_p37 hypothetical protein phrog_4422 unknown function unknown function -1 32063 32578
ARK07355.1 KY626162_p110 hypothetical protein phrog_4459 unknown function unknown function -1 79226 79444
ARK07247.1 KY626162_p2 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 573 1988
ARK07321.1 KY626162_p76 hypothetical protein phrog_5082 unknown function unknown function 1 58171 58548
ARK07332.1 KY626162_p87 rIIB lysis inhibitor phrog_609 RIIB lysis inhibitor lysis 1 66144 67253
ARK07297.1 KY626162_p52 hypothetical protein phrog_4039 unknown function unknown function 1 40770 41192
ARK07277.1 KY626162_p32 hypothetical protein phrog_402 unknown function unknown function 1 29837 29950
ARK07330.1 KY626162_p85 hypothetical protein phrog_3931 unknown function unknown function 1 63493 63669
ARK07279.1 KY626162_p34 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30359 31258
ARK07350.1 KY626162_p105 hypothetical protein phrog_4318 unknown function unknown function 1 75199 75546
ARK07275.1 KY626162_p30 tail fibers protein phrog_4277 tail fiber protein tail 1 27333 28694
ARK07261.1 KY626162_p16 hypothetical protein phrog_205 tail sheath tail 1 15569 16921
ARK07333.1 KY626162_p88 hypothetical protein phrog_600 unknown function unknown function 1 67354 67902
ARK07317.1 KY626162_p72 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55509 55973
ARK07352.1 KY626162_p107 hypothetical protein phrog_4330 unknown function unknown function -1 77819 78370
ARK07325.1 KY626162_p80 hypothetical protein phrog_4726 unknown function unknown function 1 59655 59933
ARK07254.1 KY626162_p9 head-tail preconnector protein phrog_53 head maturation protease head and packaging 1 10771 12117
ARK07323.1 KY626162_p78 hypothetical protein phrog_4462 unknown function unknown function 1 58775 59095
ARK07313.1 KY626162_p68 ribonucleotide reductase of class Ia (aerobic), beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 52634 53707
ARK07353.1 KY626162_p108 hypothetical protein phrog_4457 unknown function unknown function -1 78425 78649
ARK07266.1 KY626162_p21 hypothetical protein phrog_3721 unknown function unknown function 1 20325 21122
ARK07250.1 KY626162_p5 terminase large subunit phrog_979 terminase large subunit head and packaging 1 6843 8444
ARK07326.1 KY626162_p81 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 59945 60826
ARK07320.1 KY626162_p75 ribonucleotide reductase of class III (anaerobic), activating protein phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 57723 58208
ARK07336.1 KY626162_p91 hypothetical protein phrog_1152 Rz-like spanin lysis 1 69103 69450
ARK07256.1 KY626162_p11 hypothetical protein phrog_29 major head protein head and packaging 1 12540 13616
ARK07246.1 KY626162_p1 hypothetical protein phrog_4114 unknown function unknown function 1 119 490
ARK07270.1 KY626162_p25 hypothetical protein phrog_120 baseplate wedge subunit tail 1 23063 23482
ARK07281.1 KY626162_p36 hypothetical protein phrog_2993 unknown function unknown function -1 31802 32062
ARK07302.1 KY626162_p57 hypothetical protein phrog_4424 unknown function unknown function 1 45239 45388
ARK07260.1 KY626162_p15 hypothetical protein phrog_4082 unknown function unknown function 1 14969 15568
ARK07262.1 KY626162_p17 hypothetical protein phrog_280 virion structural protein head and packaging 1 16937 17383
ARK07272.1 KY626162_p27 hypothetical protein phrog_4017 baseplate protein tail 1 24954 25811
ARK07327.1 KY626162_p82 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60835 61326
ARK07358.1 KY626162_p113 hypothetical protein phrog_4385 unknown function unknown function -1 80446 80739
ARK07292.1 KY626162_p47 hypothetical protein phrog_4230 unknown function unknown function -1 36025 36243
ARK07271.1 KY626162_p26 hypothetical protein phrog_6 baseplate wedge subunit tail 1 23482 24951
ARK07314.1 KY626162_p69 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 53707 53949
ARK07255.1 KY626162_p10 hypothetical protein phrog_4146 tail protease other 1 12129 12506
ARK07257.1 KY626162_p12 hypothetical protein phrog_1732 unknown function unknown function 1 13668 14114
ARK07295.1 KY626162_p50 DNA polymerase phrog_6375 DNA polymerase DNA, RNA and nucleotide metabolism -1 37013 37567
ARK07301.1 KY626162_p56 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 43001 44986
ARK07249.1 KY626162_p4 hypothetical protein phrog_4397 unknown function unknown function 1 6621 6821
ARK07331.1 KY626162_p86 rIIA lysis inhibitor phrog_612 RIIA lysis inhibitor lysis 1 63698 66064
ARK07288.1 KY626162_p43 hypothetical protein phrog_5768 unknown function unknown function -1 35230 35421
ARK07318.1 KY626162_p73 ribonucleotide reductase of class III (anaerobic), large subunit phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism 1 56217 57083
ARK07283.1 KY626162_p38 hypothetical protein phrog_4116 unknown function unknown function -1 32592 32951
ARK07338.1 KY626162_p93 hypothetical protein phrog_4391 unknown function unknown function 1 69610 69879
ARK07263.1 KY626162_p18 hypothetical protein phrog_1613 tail assembly chaperone tail 1 17457 17855
ARK07341.1 KY626162_p96 hypothetical protein phrog_2210 unknown function unknown function 1 70423 70623
ARK07319.1 KY626162_p74 homing endonuclease phrog_655 homing endonuclease DNA, RNA and nucleotide metabolism 1 57091 57648