Genomic map of Sphingobium phage Lacusarx (KY629563)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY629563
Definition
Sphingobium phage Lacusarx, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lacusarxvirus; Sphingobium virus Lacusarx.
DB of origin
NUCCORE
Length
130138
Host Name
Sphingobium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
196
%GC
60.17
Number of singletons
130
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARK07431.1 KY629563_p31 hypothetical protein singleton unknown function unknown function 1 33637 33903
ARK07432.1 KY629563_p32 HTH-type transcriptional regulator phrog_4 transcriptional repressor transcription regulation -1 34409 35089
ARK07482.1 KY629563_p82 hypothetical protein singleton unknown function unknown function 1 68085 68591
ARK07456.1 KY629563_p56 hypothetical protein singleton unknown function unknown function -1 48724 48957
ARK07435.1 KY629563_p35 ribonucleoside-diphosphate reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 37032 38720
ARK07463.1 KY629563_p63 hypothetical protein phrog_1745 DNA transfer protein other -1 53603 55228
ARK07424.1 KY629563_p24 F5/8 type C domain protein singleton unknown function unknown function 1 23924 27475
ARK07478.1 KY629563_p78 hypothetical protein singleton unknown function unknown function 1 64899 65093
ARK07508.1 KY629563_p108 hypothetical protein singleton unknown function unknown function -1 90667 91011
ARK07569.1 KY629563_p169 hypothetical protein singleton unknown function unknown function 1 116458 116814
ARK07535.1 KY629563_p135 hypothetical protein singleton unknown function unknown function -1 102664 102969
ARK07579.1 KY629563_p179 hypothetical protein singleton unknown function unknown function 1 123163 123375
ARK07440.1 KY629563_p40 hypothetical protein singleton unknown function unknown function -1 39853 39969
ARK07420.1 KY629563_p20 hypothetical protein phrog_2913 glycoside hydrolase other 1 17913 18521
ARK07567.1 KY629563_p167 hypothetical protein singleton unknown function unknown function 1 115787 116158
ARK07591.1 KY629563_p191 hypothetical protein singleton unknown function unknown function 1 127125 127601
ARK07480.1 KY629563_p80 tyrosine recombinase phrog_216 integrase integration and excision 1 65555 66133
ARK07494.1 KY629563_p94 hypothetical protein singleton unknown function unknown function 1 82339 82698
ARK07433.1 KY629563_p33 ribonucleoside-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 35250 36650
ARK07561.1 KY629563_p161 hypothetical protein singleton unknown function unknown function -1 111362 111844
ARK07596.1 KY629563_p196 hypothetical protein singleton unknown function unknown function 1 129826 129966
ARK07469.1 KY629563_p69 hypothetical protein singleton unknown function unknown function -1 57885 58100
ARK07415.1 KY629563_p15 hypothetical protein phrog_290 minor tail protein tail 1 9655 11487
ARK07404.1 KY629563_p4 hypothetical protein singleton unknown function unknown function 1 1824 2114
ARK07534.1 KY629563_p134 hypothetical protein singleton unknown function unknown function -1 102101 102667
ARK07487.1 KY629563_p87 hypothetical protein singleton unknown function unknown function 1 75572 78721
ARK07479.1 KY629563_p79 hypothetical protein singleton unknown function unknown function 1 65071 65448
ARK07572.1 KY629563_p172 hypothetical protein singleton unknown function unknown function 1 121019 121435
ARK07408.1 KY629563_p8 capsid family protein phrog_212 major head protein head and packaging 1 5680 6606
ARK07529.1 KY629563_p129 hypothetical protein phrog_6452 unknown function unknown function -1 100277 100972
ARK07587.1 KY629563_p187 hypothetical protein singleton unknown function unknown function 1 125757 125963
ARK07476.1 KY629563_p76 hypothetical protein phrog_612 RIIA lysis inhibitor lysis -1 62383 64629
ARK07563.1 KY629563_p163 hypothetical protein singleton unknown function unknown function -1 112233 112943
ARK07510.1 KY629563_p110 nicotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 91648 93105
ARK07406.1 KY629563_p6 hypothetical protein singleton unknown function unknown function 1 4239 4412
ARK07427.1 KY629563_p27 hypothetical protein singleton unknown function unknown function 1 30539 30967
ARK07583.1 KY629563_p183 hypothetical protein singleton unknown function unknown function 1 124433 124618
ARK07443.1 KY629563_p43 FAD-dependent thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 40961 41899
ARK07445.1 KY629563_p45 ATP-dependent RecD-like DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 42778 44106
ARK07556.1 KY629563_p156 hypothetical protein singleton unknown function unknown function -1 109692 110009
ARK07473.1 KY629563_p73 hypothetical protein singleton unknown function unknown function -1 60480 60971
ARK07562.1 KY629563_p162 hypothetical protein singleton unknown function unknown function -1 111940 112236
ARK07546.1 KY629563_p146 hypothetical protein singleton unknown function unknown function -1 105731 105901
ARK07511.1 KY629563_p111 bifunctional NMN adenylyltransferase/nudix hydrolase phrog_395 cytidyltransferase other -1 93119 94207
ARK07539.1 KY629563_p139 hypothetical protein singleton unknown function unknown function -1 103821 104111
ARK07531.1 KY629563_p131 hypothetical protein singleton unknown function unknown function -1 101427 101555
ARK07437.1 KY629563_p37 hypothetical protein singleton unknown function unknown function -1 39215 39457
ARK07452.1 KY629563_p52 hypothetical protein phrog_902 unknown function unknown function -1 47475 47747
ARK07521.1 KY629563_p121 hypothetical protein singleton unknown function unknown function -1 97106 97255
ARK07554.1 KY629563_p154 hypothetical protein singleton unknown function unknown function -1 108906 109490
ARK07542.1 KY629563_p142 hypothetical protein singleton unknown function unknown function -1 104599 104925
ARK07550.1 KY629563_p150 hypothetical protein phrog_4254 unknown function unknown function -1 106999 107352
ARK07495.1 KY629563_p95 hypothetical protein phrog_547 phosphoesterase other 1 82823 83485
ARK07453.1 KY629563_p53 hypothetical protein phrog_19048 unknown function unknown function -1 47776 48039
ARK07409.1 KY629563_p9 hypothetical protein phrog_427 unknown function unknown function 1 6677 7123
ARK07589.1 KY629563_p189 ANTAR domain protein singleton unknown function unknown function 1 126641 126748
ARK07514.1 KY629563_p114 hypothetical protein singleton unknown function unknown function -1 94942 95313
ARK07460.1 KY629563_p60 hypothetical protein phrog_21617 unknown function unknown function -1 52593 52955
ARK07488.1 KY629563_p88 tRNA-specific adenosine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 78934 79458
ARK07481.1 KY629563_p81 hypothetical protein singleton unknown function unknown function 1 66210 66578
ARK07584.1 KY629563_p184 hypothetical protein phrog_5003 unknown function unknown function 1 124622 124888
ARK07451.1 KY629563_p51 hypothetical protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 46426 47475
ARK07560.1 KY629563_p160 hypothetical protein singleton unknown function unknown function -1 111084 111365
ARK07446.1 KY629563_p46 hypothetical protein singleton unknown function unknown function -1 44114 44284
ARK07570.1 KY629563_p170 crossover junction endodeoxyribonuclease phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 116781 117338
ARK07565.1 KY629563_p165 hypothetical protein singleton unknown function unknown function -1 113278 114063
ARK07525.1 KY629563_p125 hypothetical protein singleton unknown function unknown function -1 98646 98876
ARK07411.1 KY629563_p11 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7692 8201
ARK07544.1 KY629563_p144 hypothetical protein singleton unknown function unknown function -1 105143 105355
ARK07447.1 KY629563_p47 hypothetical protein singleton unknown function unknown function -1 44262 44492
ARK07520.1 KY629563_p120 hypothetical protein phrog_289 GTP-binding domain other -1 96712 97119
ARK07551.1 KY629563_p151 hypothetical protein singleton unknown function unknown function -1 107345 107692
ARK07528.1 KY629563_p128 hypothetical protein phrog_17488 unknown function unknown function -1 99684 100097
ARK07458.1 KY629563_p58 hypothetical protein singleton unknown function unknown function -1 49611 49949
ARK07549.1 KY629563_p149 hypothetical protein singleton unknown function unknown function -1 106901 107020
ARK07568.1 KY629563_p168 hypothetical protein singleton unknown function unknown function 1 116155 116454
ARK07506.1 KY629563_p106 hypothetical protein phrog_4046 unknown function unknown function -1 89443 90348
ARK07429.1 KY629563_p29 DNA ligase phrog_3869 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 31341 33491
ARK07496.1 KY629563_p96 RNA polymerase sigma factor singleton unknown function unknown function 1 83485 84255
ARK07421.1 KY629563_p21 F5/8 type C domain protein phrog_778 tail assembly protein tail 1 18522 19913
ARK07485.1 KY629563_p85 hypothetical protein phrog_4137 unknown function unknown function 1 73531 73815
ARK07553.1 KY629563_p153 hypothetical protein singleton unknown function unknown function -1 108602 108895
ARK07474.1 KY629563_p74 hypothetical protein singleton unknown function unknown function -1 60979 61077
ARK07492.1 KY629563_p92 hypothetical protein singleton unknown function unknown function 1 81646 81810
ARK07439.1 KY629563_p39 hypothetical protein singleton unknown function unknown function -1 39632 39853
ARK07552.1 KY629563_p152 RNA pyrophosphohydrolase singleton unknown function unknown function -1 107689 108609
ARK07403.1 KY629563_p3 hypothetical protein singleton unknown function unknown function 1 1462 1824
ARK07538.1 KY629563_p138 hypothetical protein singleton unknown function unknown function -1 103537 103821
ARK07489.1 KY629563_p89 RNA-splicing ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 79481 80785
ARK07414.1 KY629563_p14 hypothetical protein singleton unknown function unknown function 1 9072 9503
ARK07423.1 KY629563_p23 hypothetical protein phrog_4271 tail protein tail 1 20322 23912
ARK07405.1 KY629563_p5 hypothetical protein phrog_145 portal protein head and packaging 1 2484 4235
ARK07434.1 KY629563_p34 hypothetical protein singleton unknown function unknown function -1 36625 36900
ARK07588.1 KY629563_p188 hypothetical protein phrog_22565 unknown function unknown function 1 126128 126472
ARK07425.1 KY629563_p25 F5/8 type C domain protein singleton unknown function unknown function 1 27472 29679
ARK07558.1 KY629563_p158 hypothetical protein singleton unknown function unknown function -1 110173 110532
ARK07545.1 KY629563_p145 hypothetical protein phrog_839 unknown function unknown function -1 105349 105615
ARK07471.1 KY629563_p71 RNA polymerase-associated protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 58465 60291
ARK07410.1 KY629563_p10 hypothetical protein singleton unknown function unknown function 1 7198 7608
ARK07519.1 KY629563_p119 hypothetical protein singleton unknown function unknown function -1 96369 96692
ARK07459.1 KY629563_p59 thermostable DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50165 52639
ARK07530.1 KY629563_p130 hypothetical protein singleton unknown function unknown function -1 101100 101423
ARK07559.1 KY629563_p159 hypothetical protein singleton unknown function unknown function -1 110534 110956
ARK07442.1 KY629563_p42 hypothetical protein singleton unknown function unknown function -1 40600 40869
ARK07557.1 KY629563_p157 hypothetical protein singleton unknown function unknown function -1 110006 110176
ARK07532.1 KY629563_p132 hypothetical protein singleton unknown function unknown function -1 101548 101688
ARK07571.1 KY629563_p171 terminase-like family protein phrog_38 terminase large subunit head and packaging 1 117747 119462
ARK07419.1 KY629563_p19 tail tape-measure protein phrog_9807 tail length tape measure protein tail 1 12589 17850
ARK07428.1 KY629563_p28 hypothetical protein singleton unknown function unknown function 1 31017 31166
ARK07493.1 KY629563_p93 hypothetical protein singleton unknown function unknown function 1 81953 82330
ARK07540.1 KY629563_p140 hypothetical protein singleton unknown function unknown function -1 104111 104344
ARK07467.1 KY629563_p67 hypothetical protein singleton unknown function unknown function -1 57068 57379
ARK07585.1 KY629563_p185 hypothetical protein singleton unknown function unknown function 1 125062 125181
ARK07491.1 KY629563_p91 hypothetical protein singleton unknown function unknown function 1 81300 81659
ARK07466.1 KY629563_p66 hypothetical protein phrog_318 deoxyribonucleoside 5' monophosphate phosphatase other -1 56257 57000
ARK07450.1 KY629563_p50 hypothetical protein singleton unknown function unknown function -1 45928 46293
ARK07536.1 KY629563_p136 hypothetical protein singleton unknown function unknown function -1 102966 103241
ARK07505.1 KY629563_p105 hypothetical protein singleton unknown function unknown function -1 89085 89372
ARK07464.1 KY629563_p64 hypothetical protein phrog_799 DNA methyltransferase other -1 55241 56011
ARK07527.1 KY629563_p127 hypothetical protein singleton unknown function unknown function -1 99205 99627
ARK07574.1 KY629563_p174 hypothetical protein singleton unknown function unknown function 1 121764 121895
ARK07477.1 KY629563_p77 hypothetical protein singleton unknown function unknown function 1 64705 64914
ARK07522.1 KY629563_p122 hypothetical protein singleton unknown function unknown function -1 97252 97500
ARK07455.1 KY629563_p55 hypothetical protein singleton unknown function unknown function -1 48407 48724
ARK07503.1 KY629563_p103 site-specific tyrosine recombinase phrog_1 integrase integration and excision -1 86990 88366
ARK07543.1 KY629563_p143 hypothetical protein singleton unknown function unknown function -1 104922 105146
ARK07418.1 KY629563_p18 hypothetical protein singleton unknown function unknown function 1 12328 12564
ARK07416.1 KY629563_p16 hypothetical protein singleton unknown function unknown function 1 11487 11612
ARK07500.1 KY629563_p100 hypothetical protein singleton unknown function unknown function -1 85116 85331
ARK07499.1 KY629563_p99 hypothetical protein singleton unknown function unknown function -1 84866 85108
ARK07454.1 KY629563_p54 hypothetical protein singleton unknown function unknown function -1 48045 48410
ARK07595.1 KY629563_p195 hypothetical protein singleton unknown function unknown function 1 129512 129772
ARK07573.1 KY629563_p173 hypothetical protein singleton unknown function unknown function 1 121624 121764
ARK07430.1 KY629563_p30 hypothetical protein singleton unknown function unknown function 1 33491 33640
ARK07502.1 KY629563_p102 hypothetical protein singleton unknown function unknown function -1 85956 86606
ARK07547.1 KY629563_p147 hypothetical protein singleton unknown function unknown function -1 105903 106373
ARK07541.1 KY629563_p141 hypothetical protein singleton unknown function unknown function -1 104322 104609
ARK07457.1 KY629563_p57 PolC-type DNA polymerase III phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 48970 49614
ARK07448.1 KY629563_p48 hypothetical protein singleton unknown function unknown function -1 44508 44771
ARK07465.1 KY629563_p65 hypothetical protein singleton unknown function unknown function -1 56001 56210
ARK07515.1 KY629563_p115 hypothetical protein singleton unknown function unknown function -1 95376 95567
ARK07512.1 KY629563_p112 hypothetical protein singleton unknown function unknown function -1 94296 94688
ARK07526.1 KY629563_p126 hypothetical protein phrog_9154 unknown function unknown function -1 98945 99208
ARK07483.1 KY629563_p83 hypothetical protein phrog_240 head protein head and packaging 1 71448 71876
ARK07533.1 KY629563_p133 thioredoxin-2 phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 101743 102108
ARK07504.1 KY629563_p104 hypothetical protein singleton unknown function unknown function -1 88556 89047
ARK07594.1 KY629563_p194 hypothetical protein singleton unknown function unknown function 1 128757 129131
ARK07497.1 KY629563_p97 hypothetical protein singleton unknown function unknown function -1 84349 84591
ARK07513.1 KY629563_p113 hypothetical protein singleton unknown function unknown function -1 94685 94945
ARK07581.1 KY629563_p181 hypothetical protein singleton unknown function unknown function 1 123802 124008
ARK07524.1 KY629563_p124 hypothetical protein phrog_4767 unknown function unknown function -1 98178 98561
ARK07475.1 KY629563_p75 transposase phrog_609 RIIB lysis inhibitor lysis -1 61077 62369
ARK07517.1 KY629563_p117 hypothetical protein singleton unknown function unknown function -1 95710 95898
ARK07576.1 KY629563_p176 hypothetical protein phrog_18452 DNA ligase DNA, RNA and nucleotide metabolism 1 122198 122503
ARK07486.1 KY629563_p86 hypothetical protein phrog_5046 HNH endonuclease DNA, RNA and nucleotide metabolism 1 74324 74869
ARK07470.1 KY629563_p70 hypothetical protein phrog_9995 unknown function unknown function -1 58103 58468
ARK07498.1 KY629563_p98 hypothetical protein singleton unknown function unknown function -1 84588 84869
ARK07592.1 KY629563_p192 hypothetical protein singleton unknown function unknown function 1 127774 127875
ARK07468.1 KY629563_p68 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism -1 57376 57885
ARK07472.1 KY629563_p72 hypothetical protein singleton unknown function unknown function -1 60295 60483
ARK07501.1 KY629563_p101 hypothetical protein singleton unknown function unknown function -1 85315 85959
ARK07422.1 KY629563_p22 NlpC/P60 family protein phrog_329 minor tail protein tail 1 19900 20322
ARK07402.1 KY629563_p2 hypothetical protein singleton unknown function unknown function 1 1168 1452
ARK07575.1 KY629563_p175 hypothetical protein singleton unknown function unknown function 1 121897 122205
ARK07564.1 KY629563_p164 hypothetical protein singleton unknown function unknown function -1 112940 113248
ARK07566.1 KY629563_p166 hypothetical protein singleton unknown function unknown function -1 114060 114971
ARK07413.1 KY629563_p13 hypothetical protein singleton unknown function unknown function 1 8587 9075
ARK07484.1 KY629563_p84 hypothetical protein singleton unknown function unknown function 1 71903 73534
ARK07509.1 KY629563_p109 hypothetical protein singleton unknown function unknown function -1 91133 91612
ARK07407.1 KY629563_p7 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 4745 5515
ARK07438.1 KY629563_p38 hypothetical protein singleton unknown function unknown function -1 39454 39573
ARK07523.1 KY629563_p123 hypothetical protein singleton unknown function unknown function -1 97562 98167
ARK07537.1 KY629563_p137 hypothetical protein singleton unknown function unknown function -1 103250 103540
ARK07507.1 KY629563_p107 hypothetical protein singleton unknown function unknown function -1 90404 90667
ARK07580.1 KY629563_p180 hypothetical protein singleton unknown function unknown function 1 123376 123750
ARK07590.1 KY629563_p190 hypothetical protein singleton unknown function unknown function 1 126760 127125
ARK07462.1 KY629563_p62 hypothetical protein phrog_4301 unknown function unknown function -1 53095 53622
ARK07555.1 KY629563_p155 hypothetical protein singleton unknown function unknown function -1 109558 109683
ARK07578.1 KY629563_p178 hypothetical protein singleton unknown function unknown function 1 122816 123163
ARK07586.1 KY629563_p186 hypothetical protein phrog_12365 unknown function unknown function 1 125263 125742
ARK07412.1 KY629563_p12 hypothetical protein singleton unknown function unknown function 1 8205 8585
ARK07548.1 KY629563_p148 hypothetical protein phrog_11227 protease other -1 106399 106827
ARK07577.1 KY629563_p177 hypothetical protein singleton unknown function unknown function 1 122496 122687
ARK07516.1 KY629563_p116 hypothetical protein singleton unknown function unknown function -1 95567 95710
ARK07593.1 KY629563_p193 hypothetical protein phrog_6186 unknown function unknown function 1 127900 128601
ARK07444.1 KY629563_p44 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 41917 42507
ARK07518.1 KY629563_p118 hypothetical protein singleton unknown function unknown function -1 95954 96382
ARK07436.1 KY629563_p36 hypothetical protein singleton unknown function unknown function -1 38929 39225
ARK07441.1 KY629563_p41 nucleotide pyrophosphohydrolase domain protein phrog_229 MazG-like pyrophosphatase other -1 39969 40586
ARK07401.1 KY629563_p1 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other 1 269 1168
ARK07449.1 KY629563_p49 hypothetical protein phrog_9528 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 44837 45838
ARK07417.1 KY629563_p17 hypothetical protein phrog_313 Tail assembly chaperone tail 1 11750 12151
ARK07490.1 KY629563_p90 hypothetical protein phrog_2072 unknown function unknown function 1 80831 81274
ARK07461.1 KY629563_p61 hypothetical protein singleton unknown function unknown function -1 52952 53086
ARK07426.1 KY629563_p26 1,6-anhydro-N-acetylmuramyl-L-alanine amidase phrog_1794 amidase lysis 1 29697 30539
ARK07582.1 KY629563_p182 hypothetical protein singleton unknown function unknown function 1 124152 124430