| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY653123 |
Definition |
Staphylococcus phage IME1361_01, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus; unclassified Biseptimavirus. |
DB of origin |
NUCCORE |
Length |
43516 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
32.84 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARM68160.1 | KY653123_p35 | transcriptional activator | phrog_301 | secreted protein | other | 1 | 16618 | 17004 |
| ARM68128.1 | KY653123_p3 | hypothetical protein | phrog_1176 | unknown function | unknown function | -1 | 2091 | 2273 |
| ARM68149.1 | KY653123_p24 | holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 13158 | 13562 |
| ARM68151.1 | KY653123_p26 | hypothetical protein | phrog_258 | virulence associated | other | 1 | 13947 | 14195 |
| ARM68177.1 | KY653123_p52 | hypothetical protein | phrog_1963 | unknown function | unknown function | 1 | 26613 | 26750 |
| ARM68188.1 | KY653123_p63 | chemotaxis-inhibiting protein | phrog_7039 | chemotaxis inhibition protein | moron, auxiliary metabolic gene and host takeover | -1 | 40834 | 41283 |
| ARM68163.1 | KY653123_p38 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 17378 | 17794 |
| ARM68135.1 | KY653123_p10 | hypothetical protein | phrog_1263 | unknown function | unknown function | 1 | 5208 | 5348 |
| ARM68132.1 | KY653123_p7 | repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 3612 | 4328 |
| ARM68187.1 | KY653123_p62 | N-acetylmuramoyl-L-alanine amidase | singleton | unknown function | unknown function | 1 | 40446 | 40631 |
| ARM68172.1 | KY653123_p47 | hypothetical protein | phrog_25 | head closure Hc1 | connector | 1 | 24086 | 24448 |
| ARM68165.1 | KY653123_p40 | hypothetical protein | phrog_1066 | unknown function | unknown function | 1 | 18319 | 18798 |
| ARM68136.1 | KY653123_p11 | hypothetical protein | phrog_3505 | unknown function | unknown function | -1 | 5341 | 5550 |
| ARM68176.1 | KY653123_p51 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 26212 | 26562 |
| ARM68159.1 | KY653123_p34 | hypothetical protein | phrog_555 | unknown function | unknown function | 1 | 16389 | 16625 |
| ARM68191.1 | KY653123_p66 | hypothetical protein | phrog_9279 | unknown function | unknown function | 1 | 42702 | 42857 |
| ARM68148.1 | KY653123_p23 | hypothetical protein | phrog_433 | unknown function | unknown function | 1 | 12931 | 13149 |
| ARM68126.1 | KY653123_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 72 | 1109 |
| ARM68143.1 | KY653123_p18 | ATPase | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7964 | 9919 |
| ARM68174.1 | KY653123_p49 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 24846 | 25253 |
| ARM68145.1 | KY653123_p20 | metallo-beta-lactamase superfamily domain protein | phrog_392 | metal-dependent hydrolase | other | 1 | 11054 | 11539 |
| ARM68164.1 | KY653123_p39 | hypothetical protein | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 18026 | 18325 |
| ARM68168.1 | KY653123_p43 | protease-like protein | phrog_94 | head maturation protease | head and packaging | 1 | 21619 | 22356 |
| ARM68161.1 | KY653123_p36 | transcriptional activator | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 17001 | 17150 |
| ARM68179.1 | KY653123_p54 | hypothetical protein | phrog_202 | distal tail protein Dit | tail | 1 | 31333 | 32817 |
| ARM68133.1 | KY653123_p8 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4492 | 4734 |
| ARM68141.1 | KY653123_p16 | hypothetical protein | phrog_401 | unknown function | unknown function | 1 | 7435 | 7695 |
| ARM68167.1 | KY653123_p42 | portal (connector) protein | phrog_12 | portal protein | head and packaging | 1 | 20472 | 21635 |
| ARM68157.1 | KY653123_p32 | hypothetical protein | phrog_1122 | unknown function | unknown function | 1 | 16002 | 16196 |
| ARM68155.1 | KY653123_p30 | dimeric dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 15226 | 15762 |
| ARM68138.1 | KY653123_p13 | hypothetical protein | phrog_6175 | unknown function | unknown function | 1 | 6369 | 6629 |
| ARM68150.1 | KY653123_p25 | hypothetical protein | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 13575 | 13946 |
| ARM68154.1 | KY653123_p29 | hypothetical protein | phrog_266 | unknown function | unknown function | 1 | 14985 | 15233 |
| ARM68184.1 | KY653123_p59 | holin | phrog_297 | holin | lysis | 1 | 38054 | 38308 |
| ARM68186.1 | KY653123_p61 | staphylokinase | phrog_4358 | kinase | other | 1 | 39266 | 39757 |
| ARM68129.1 | KY653123_p4 | hypothetical protein | phrog_5192 | unknown function | unknown function | -1 | 2344 | 2529 |
| ARM68171.1 | KY653123_p46 | hypothetical protein | phrog_749 | unknown function | unknown function | 1 | 23818 | 24102 |
| ARM68130.1 | KY653123_p5 | hypothetical protein | phrog_6385 | unknown function | unknown function | -1 | 2526 | 2672 |
| ARM68137.1 | KY653123_p12 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 5607 | 6356 |
| ARM68180.1 | KY653123_p55 | structural protein | phrog_1786 | minor head protein | head and packaging | 1 | 32833 | 36615 |
| ARM68189.1 | KY653123_p64 | hypothetical protein | phrog_4954 | complement inhibitor | other | 1 | 41963 | 42313 |
| ARM68146.1 | KY653123_p21 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11540 | 12010 |
| ARM68127.1 | KY653123_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1300 | 2037 |
| ARM68131.1 | KY653123_p6 | hypothetical protein | phrog_6600 | unknown function | unknown function | -1 | 2746 | 3600 |
| ARM68185.1 | KY653123_p60 | N-acetylmuramoyl-L-alanine amidase | phrog_635 | endolysin | lysis | 1 | 38320 | 39075 |
| ARM68169.1 | KY653123_p44 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 22379 | 23524 |
| ARM68152.1 | KY653123_p27 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 14259 | 14606 |
| ARM68192.1 | KY653123_p67 | hypothetical protein | phrog_18311 | unknown function | unknown function | -1 | 42937 | 43116 |
| ARM68175.1 | KY653123_p50 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 25254 | 25895 |
| ARM68190.1 | KY653123_p65 | hypothetical protein | phrog_13606 | unknown function | unknown function | -1 | 42310 | 42519 |
| ARM68166.1 | KY653123_p41 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 18795 | 20456 |
| ARM68156.1 | KY653123_p31 | hypothetical protein | phrog_278 | transcriptional regulator | transcription regulation | 1 | 15799 | 16005 |
| ARM68147.1 | KY653123_p22 | replication initiation protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 12040 | 12924 |
| ARM68142.1 | KY653123_p17 | hypothetical protein | phrog_2527 | unknown function | unknown function | 1 | 7704 | 7967 |
| ARM68158.1 | KY653123_p33 | hypothetical protein | phrog_1616 | unknown function | unknown function | 1 | 16193 | 16396 |
| ARM68173.1 | KY653123_p48 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 24445 | 24849 |
| ARM68144.1 | KY653123_p19 | recombinational DNA repair protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9921 | 10841 |
| ARM68162.1 | KY653123_p37 | hypothetical protein | phrog_386 | unknown function | unknown function | 1 | 17150 | 17350 |
| ARM68182.1 | KY653123_p57 | hypothetical protein | phrog_1747 | unknown function | unknown function | 1 | 36806 | 37093 |
| ARM68183.1 | KY653123_p58 | hypothetical protein | phrog_3700 | unknown function | unknown function | 1 | 37243 | 37524 |
| ARM68178.1 | KY653123_p53 | tail length tape-measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 26807 | 31336 |
| ARM68140.1 | KY653123_p15 | hypothetical protein | phrog_369 | unknown function | unknown function | 1 | 7179 | 7340 |
| ARM68134.1 | KY653123_p9 | hypothetical protein | phrog_847 | anti-repressor Ant | transcription regulation | 1 | 4747 | 5193 |
| ARM68181.1 | KY653123_p56 | hypothetical protein | phrog_1399 | unknown function | unknown function | 1 | 36608 | 36760 |
| ARM68170.1 | KY653123_p45 | transcriptional terminator | phrog_390 | Arc-like repressor | transcription regulation | 1 | 23544 | 23828 |
| ARM68139.1 | KY653123_p14 | hypothetical protein | phrog_823 | unknown function | unknown function | 1 | 6862 | 7182 |
| ARM68153.1 | KY653123_p28 | hypothetical protein | phrog_742 | acetyltransferase | other | 1 | 14603 | 14992 |