Genomic map of Staphylococcus phage IME1361_01 (KY653123)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY653123
Definition
Staphylococcus phage IME1361_01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus; unclassified Biseptimavirus.
DB of origin
NUCCORE
Length
43516
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
32.84
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM68160.1 KY653123_p35 transcriptional activator phrog_301 secreted protein other 1 16618 17004
ARM68128.1 KY653123_p3 hypothetical protein phrog_1176 unknown function unknown function -1 2091 2273
ARM68149.1 KY653123_p24 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 13158 13562
ARM68151.1 KY653123_p26 hypothetical protein phrog_258 virulence associated other 1 13947 14195
ARM68177.1 KY653123_p52 hypothetical protein phrog_1963 unknown function unknown function 1 26613 26750
ARM68188.1 KY653123_p63 chemotaxis-inhibiting protein phrog_7039 chemotaxis inhibition protein moron, auxiliary metabolic gene and host takeover -1 40834 41283
ARM68163.1 KY653123_p38 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 17378 17794
ARM68135.1 KY653123_p10 hypothetical protein phrog_1263 unknown function unknown function 1 5208 5348
ARM68132.1 KY653123_p7 repressor phrog_4 transcriptional repressor transcription regulation -1 3612 4328
ARM68187.1 KY653123_p62 N-acetylmuramoyl-L-alanine amidase singleton unknown function unknown function 1 40446 40631
ARM68172.1 KY653123_p47 hypothetical protein phrog_25 head closure Hc1 connector 1 24086 24448
ARM68165.1 KY653123_p40 hypothetical protein phrog_1066 unknown function unknown function 1 18319 18798
ARM68136.1 KY653123_p11 hypothetical protein phrog_3505 unknown function unknown function -1 5341 5550
ARM68176.1 KY653123_p51 hypothetical protein phrog_187 head-tail adaptor connector 1 26212 26562
ARM68159.1 KY653123_p34 hypothetical protein phrog_555 unknown function unknown function 1 16389 16625
ARM68191.1 KY653123_p66 hypothetical protein phrog_9279 unknown function unknown function 1 42702 42857
ARM68148.1 KY653123_p23 hypothetical protein phrog_433 unknown function unknown function 1 12931 13149
ARM68126.1 KY653123_p1 integrase phrog_1 integrase integration and excision -1 72 1109
ARM68143.1 KY653123_p18 ATPase phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 7964 9919
ARM68174.1 KY653123_p49 hypothetical protein phrog_78 tail terminator connector 1 24846 25253
ARM68145.1 KY653123_p20 metallo-beta-lactamase superfamily domain protein phrog_392 metal-dependent hydrolase other 1 11054 11539
ARM68164.1 KY653123_p39 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 18026 18325
ARM68168.1 KY653123_p43 protease-like protein phrog_94 head maturation protease head and packaging 1 21619 22356
ARM68161.1 KY653123_p36 transcriptional activator phrog_152 RinB-like transcriptional activator transcription regulation 1 17001 17150
ARM68179.1 KY653123_p54 hypothetical protein phrog_202 distal tail protein Dit tail 1 31333 32817
ARM68133.1 KY653123_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 4492 4734
ARM68141.1 KY653123_p16 hypothetical protein phrog_401 unknown function unknown function 1 7435 7695
ARM68167.1 KY653123_p42 portal (connector) protein phrog_12 portal protein head and packaging 1 20472 21635
ARM68157.1 KY653123_p32 hypothetical protein phrog_1122 unknown function unknown function 1 16002 16196
ARM68155.1 KY653123_p30 dimeric dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 15226 15762
ARM68138.1 KY653123_p13 hypothetical protein phrog_6175 unknown function unknown function 1 6369 6629
ARM68150.1 KY653123_p25 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 13575 13946
ARM68154.1 KY653123_p29 hypothetical protein phrog_266 unknown function unknown function 1 14985 15233
ARM68184.1 KY653123_p59 holin phrog_297 holin lysis 1 38054 38308
ARM68186.1 KY653123_p61 staphylokinase phrog_4358 kinase other 1 39266 39757
ARM68129.1 KY653123_p4 hypothetical protein phrog_5192 unknown function unknown function -1 2344 2529
ARM68171.1 KY653123_p46 hypothetical protein phrog_749 unknown function unknown function 1 23818 24102
ARM68130.1 KY653123_p5 hypothetical protein phrog_6385 unknown function unknown function -1 2526 2672
ARM68137.1 KY653123_p12 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 5607 6356
ARM68180.1 KY653123_p55 structural protein phrog_1786 minor head protein head and packaging 1 32833 36615
ARM68189.1 KY653123_p64 hypothetical protein phrog_4954 complement inhibitor other 1 41963 42313
ARM68146.1 KY653123_p21 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 11540 12010
ARM68127.1 KY653123_p2 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover -1 1300 2037
ARM68131.1 KY653123_p6 hypothetical protein phrog_6600 unknown function unknown function -1 2746 3600
ARM68185.1 KY653123_p60 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis 1 38320 39075
ARM68169.1 KY653123_p44 major capsid protein phrog_10 major head protein head and packaging 1 22379 23524
ARM68152.1 KY653123_p27 hypothetical protein phrog_98 unknown function unknown function 1 14259 14606
ARM68192.1 KY653123_p67 hypothetical protein phrog_18311 unknown function unknown function -1 42937 43116
ARM68175.1 KY653123_p50 hypothetical protein phrog_88 major tail protein tail 1 25254 25895
ARM68190.1 KY653123_p65 hypothetical protein phrog_13606 unknown function unknown function -1 42310 42519
ARM68166.1 KY653123_p41 terminase large subunit phrog_9 terminase large subunit head and packaging 1 18795 20456
ARM68156.1 KY653123_p31 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 15799 16005
ARM68147.1 KY653123_p22 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 12040 12924
ARM68142.1 KY653123_p17 hypothetical protein phrog_2527 unknown function unknown function 1 7704 7967
ARM68158.1 KY653123_p33 hypothetical protein phrog_1616 unknown function unknown function 1 16193 16396
ARM68173.1 KY653123_p48 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24445 24849
ARM68144.1 KY653123_p19 recombinational DNA repair protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9921 10841
ARM68162.1 KY653123_p37 hypothetical protein phrog_386 unknown function unknown function 1 17150 17350
ARM68182.1 KY653123_p57 hypothetical protein phrog_1747 unknown function unknown function 1 36806 37093
ARM68183.1 KY653123_p58 hypothetical protein phrog_3700 unknown function unknown function 1 37243 37524
ARM68178.1 KY653123_p53 tail length tape-measure protein phrog_167 tail length tape measure protein tail 1 26807 31336
ARM68140.1 KY653123_p15 hypothetical protein phrog_369 unknown function unknown function 1 7179 7340
ARM68134.1 KY653123_p9 hypothetical protein phrog_847 anti-repressor Ant transcription regulation 1 4747 5193
ARM68181.1 KY653123_p56 hypothetical protein phrog_1399 unknown function unknown function 1 36608 36760
ARM68170.1 KY653123_p45 transcriptional terminator phrog_390 Arc-like repressor transcription regulation 1 23544 23828
ARM68139.1 KY653123_p14 hypothetical protein phrog_823 unknown function unknown function 1 6862 7182
ARM68153.1 KY653123_p28 hypothetical protein phrog_742 acetyltransferase other 1 14603 14992