Genomic map of Corynebacterium phage IME1320_01 (KY653127)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY653127
Definition
Corynebacterium phage IME1320_01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
40068
Host Name
Corynebacterium simulans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
58
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM68398.1 KY653127_p2 hypothetical protein singleton unknown function unknown function -1 1415 2068
ARM68441.1 KY653127_p45 tail fiber protein singleton unknown function unknown function 1 34452 35696
ARM68445.1 KY653127_p49 peptidase phrog_3084 endolysin lysis 1 37101 38591
ARM68434.1 KY653127_p38 hypothetical protein phrog_15047 unknown function unknown function 1 25690 25980
ARM68399.1 KY653127_p3 hypothetical protein phrog_87 metallo-protease other -1 2065 2442
ARM68401.1 KY653127_p5 hypothetical protein phrog_9103 transcriptional repressor transcription regulation 1 3090 3302
ARM68430.1 KY653127_p34 hypothetical protein singleton unknown function unknown function 1 23471 23743
ARM68407.1 KY653127_p11 hypothetical protein singleton unknown function unknown function 1 5036 5500
ARM68427.1 KY653127_p31 hypothetical protein singleton unknown function unknown function 1 22383 22562
ARM68425.1 KY653127_p29 prohead protease phrog_80 head maturation protease head and packaging 1 20374 21156
ARM68403.1 KY653127_p7 hypothetical protein singleton unknown function unknown function 1 3870 4094
ARM68439.1 KY653127_p43 hypothetical protein phrog_8122 minor tail protein tail 1 33324 33710
ARM68426.1 KY653127_p30 major capsid protein phrog_10 major head protein head and packaging 1 21175 22383
ARM68449.1 KY653127_p53 hypothetical protein singleton unknown function unknown function 1 39736 39849
ARM68442.1 KY653127_p46 hypothetical protein singleton unknown function unknown function 1 35706 35942
ARM68415.1 KY653127_p19 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 13320 14681
ARM68435.1 KY653127_p39 tail length tape-measure protein phrog_8927 tail length tape measure protein tail 1 25990 30900
ARM68422.1 KY653127_p26 terminase phrog_9 terminase large subunit head and packaging 1 17520 19037
ARM68431.1 KY653127_p35 hypothetical protein phrog_123 tail terminator connector 1 23740 24144
ARM68411.1 KY653127_p15 hypothetical protein singleton unknown function unknown function 1 9744 9947
ARM68405.1 KY653127_p9 hypothetical protein singleton unknown function unknown function 1 4425 4712
ARM68421.1 KY653127_p25 hypothetical protein phrog_10594 unknown function unknown function 1 17193 17516
ARM68400.1 KY653127_p4 hypothetical protein phrog_18815 unknown function unknown function -1 2435 2926
ARM68424.1 KY653127_p28 hypothetical protein singleton unknown function unknown function 1 20204 20377
ARM68404.1 KY653127_p8 hypothetical protein singleton unknown function unknown function 1 4084 4416
ARM68444.1 KY653127_p48 hypothetical protein phrog_18593 unknown function unknown function 1 36467 37039
ARM68437.1 KY653127_p41 minor tail protein singleton unknown function unknown function 1 31699 32562
ARM68417.1 KY653127_p21 hypothetical protein phrog_12885 unknown function unknown function 1 14944 15552
ARM68440.1 KY653127_p44 hypothetical protein phrog_12076 unknown function unknown function 1 33714 34451
ARM68413.1 KY653127_p17 DNA primase phrog_256 DNA helicase DNA, RNA and nucleotide metabolism 1 10319 12781
ARM68448.1 KY653127_p52 hypothetical protein phrog_24256 unknown function unknown function 1 39383 39739
ARM68436.1 KY653127_p40 hypothetical protein phrog_106 minor tail protein tail 1 30910 31695
ARM68428.1 KY653127_p32 hypothetical protein phrog_442 head-tail adaptor connector 1 22568 23128
ARM68409.1 KY653127_p13 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7063 7650
ARM68414.1 KY653127_p18 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 13058 13339
ARM68410.1 KY653127_p14 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 7745 9739
ARM68429.1 KY653127_p33 hypothetical protein phrog_501 head closure Hc1 connector 1 23128 23490
ARM68416.1 KY653127_p20 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 14678 14944
ARM68438.1 KY653127_p42 minor tail protein singleton unknown function unknown function 1 32667 33311
ARM68432.1 KY653127_p36 hypothetical protein phrog_476 major tail protein tail 1 24206 25153
ARM68408.1 KY653127_p12 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 5500 7026
ARM68447.1 KY653127_p51 hypothetical protein phrog_4026 minor tail protein tail 1 38950 39378
ARM68419.1 KY653127_p23 hypothetical protein phrog_22117 unknown function unknown function 1 16377 16577
ARM68420.1 KY653127_p24 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16790 17074
ARM68397.1 KY653127_p1 integrase phrog_1 integrase integration and excision -1 51 1238
ARM68443.1 KY653127_p47 hypothetical protein singleton unknown function unknown function 1 36209 36457
ARM68402.1 KY653127_p6 hypothetical protein singleton unknown function unknown function 1 3757 3873
ARM68418.1 KY653127_p22 GTP pyrophosphokinase singleton unknown function unknown function 1 15527 16369
ARM68423.1 KY653127_p27 portal protein phrog_12 portal protein head and packaging 1 19047 20207
ARM68433.1 KY653127_p37 hypothetical protein phrog_5010 tail assembly chaperone tail 1 25274 25636
ARM68412.1 KY653127_p16 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 9958 10296
ARM68446.1 KY653127_p50 hypothetical protein phrog_3428 holin lysis 1 38588 38947
ARM68406.1 KY653127_p10 hypothetical protein singleton unknown function unknown function 1 4705 4896