| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY653127 |
Definition |
Corynebacterium phage IME1320_01, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40068 |
Host Name |
Corynebacterium simulans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
58 |
Number of singletons |
18 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARM68398.1 | KY653127_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1415 | 2068 |
| ARM68441.1 | KY653127_p45 | tail fiber protein | singleton | unknown function | unknown function | 1 | 34452 | 35696 |
| ARM68445.1 | KY653127_p49 | peptidase | phrog_3084 | endolysin | lysis | 1 | 37101 | 38591 |
| ARM68434.1 | KY653127_p38 | hypothetical protein | phrog_15047 | unknown function | unknown function | 1 | 25690 | 25980 |
| ARM68399.1 | KY653127_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2065 | 2442 |
| ARM68401.1 | KY653127_p5 | hypothetical protein | phrog_9103 | transcriptional repressor | transcription regulation | 1 | 3090 | 3302 |
| ARM68430.1 | KY653127_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23471 | 23743 |
| ARM68407.1 | KY653127_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5036 | 5500 |
| ARM68427.1 | KY653127_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22383 | 22562 |
| ARM68425.1 | KY653127_p29 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 20374 | 21156 |
| ARM68403.1 | KY653127_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3870 | 4094 |
| ARM68439.1 | KY653127_p43 | hypothetical protein | phrog_8122 | minor tail protein | tail | 1 | 33324 | 33710 |
| ARM68426.1 | KY653127_p30 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 21175 | 22383 |
| ARM68449.1 | KY653127_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39736 | 39849 |
| ARM68442.1 | KY653127_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35706 | 35942 |
| ARM68415.1 | KY653127_p19 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 13320 | 14681 |
| ARM68435.1 | KY653127_p39 | tail length tape-measure protein | phrog_8927 | tail length tape measure protein | tail | 1 | 25990 | 30900 |
| ARM68422.1 | KY653127_p26 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 17520 | 19037 |
| ARM68431.1 | KY653127_p35 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 23740 | 24144 |
| ARM68411.1 | KY653127_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9744 | 9947 |
| ARM68405.1 | KY653127_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4425 | 4712 |
| ARM68421.1 | KY653127_p25 | hypothetical protein | phrog_10594 | unknown function | unknown function | 1 | 17193 | 17516 |
| ARM68400.1 | KY653127_p4 | hypothetical protein | phrog_18815 | unknown function | unknown function | -1 | 2435 | 2926 |
| ARM68424.1 | KY653127_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20204 | 20377 |
| ARM68404.1 | KY653127_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4084 | 4416 |
| ARM68444.1 | KY653127_p48 | hypothetical protein | phrog_18593 | unknown function | unknown function | 1 | 36467 | 37039 |
| ARM68437.1 | KY653127_p41 | minor tail protein | singleton | unknown function | unknown function | 1 | 31699 | 32562 |
| ARM68417.1 | KY653127_p21 | hypothetical protein | phrog_12885 | unknown function | unknown function | 1 | 14944 | 15552 |
| ARM68440.1 | KY653127_p44 | hypothetical protein | phrog_12076 | unknown function | unknown function | 1 | 33714 | 34451 |
| ARM68413.1 | KY653127_p17 | DNA primase | phrog_256 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 10319 | 12781 |
| ARM68448.1 | KY653127_p52 | hypothetical protein | phrog_24256 | unknown function | unknown function | 1 | 39383 | 39739 |
| ARM68436.1 | KY653127_p40 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 30910 | 31695 |
| ARM68428.1 | KY653127_p32 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 22568 | 23128 |
| ARM68409.1 | KY653127_p13 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7063 | 7650 |
| ARM68414.1 | KY653127_p18 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13058 | 13339 |
| ARM68410.1 | KY653127_p14 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7745 | 9739 |
| ARM68429.1 | KY653127_p33 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 23128 | 23490 |
| ARM68416.1 | KY653127_p20 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 14678 | 14944 |
| ARM68438.1 | KY653127_p42 | minor tail protein | singleton | unknown function | unknown function | 1 | 32667 | 33311 |
| ARM68432.1 | KY653127_p36 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 24206 | 25153 |
| ARM68408.1 | KY653127_p12 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5500 | 7026 |
| ARM68447.1 | KY653127_p51 | hypothetical protein | phrog_4026 | minor tail protein | tail | 1 | 38950 | 39378 |
| ARM68419.1 | KY653127_p23 | hypothetical protein | phrog_22117 | unknown function | unknown function | 1 | 16377 | 16577 |
| ARM68420.1 | KY653127_p24 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16790 | 17074 |
| ARM68397.1 | KY653127_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 51 | 1238 |
| ARM68443.1 | KY653127_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36209 | 36457 |
| ARM68402.1 | KY653127_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3757 | 3873 |
| ARM68418.1 | KY653127_p22 | GTP pyrophosphokinase | singleton | unknown function | unknown function | 1 | 15527 | 16369 |
| ARM68423.1 | KY653127_p27 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 19047 | 20207 |
| ARM68433.1 | KY653127_p37 | hypothetical protein | phrog_5010 | tail assembly chaperone | tail | 1 | 25274 | 25636 |
| ARM68412.1 | KY653127_p16 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 9958 | 10296 |
| ARM68446.1 | KY653127_p50 | hypothetical protein | phrog_3428 | holin | lysis | 1 | 38588 | 38947 |
| ARM68406.1 | KY653127_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4705 | 4896 |