Genomic map of Staphylococcus phage IME1365_01 (KY653129)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY653129
Definition
Staphylococcus phage IME1365_01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
DB of origin
NUCCORE
Length
44875
Host Name
Staphylococcus haemolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
35.34
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM68516.1 KY653129_p47 hypothetical protein phrog_183 tail chaperone protein tail 1 25308 25811
ARM68493.1 KY653129_p24 hypothetical protein phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 13119 13583
ARM68497.1 KY653129_p28 hypothetical protein phrog_4380 unknown function unknown function 1 14366 14638
ARM68487.1 KY653129_p18 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 11332 11643
ARM68506.1 KY653129_p37 minor capsid protein phrog_115 minor head protein head and packaging 1 19621 20424
ARM68477.1 KY653129_p8 hypothetical protein phrog_7948 unknown function unknown function -1 4355 5011
ARM68529.1 KY653129_p60 hypothetical protein phrog_1299 holin lysis 1 41729 42028
ARM68485.1 KY653129_p16 DNA primase/helicase phrog_13901 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 8750 9601
ARM68511.1 KY653129_p42 head-tail adaptor phrog_25 head closure Hc1 connector 1 22569 22898
ARM68517.1 KY653129_p48 hypothetical protein phrog_1404 tail protein tail 1 25841 26149
ARM68520.1 KY653129_p51 minor structural protein phrog_663 minor head protein head and packaging 1 30332 32170
ARM68483.1 KY653129_p14 DEAH-family helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 6917 8212
ARM68518.1 KY653129_p49 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 26154 29366
ARM68521.1 KY653129_p52 neck protein phrog_4775 pre-neck appendage protein connector 1 32185 34851
ARM68515.1 KY653129_p46 hypothetical protein phrog_238 major tail protein tail 1 24716 25249
ARM68476.1 KY653129_p7 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 3490 4263
ARM68479.1 KY653129_p10 hypothetical protein phrog_369 unknown function unknown function 1 5393 5584
ARM68491.1 KY653129_p22 hypothetical protein phrog_1689 nucleotide kinase other 1 12220 12681
ARM68489.1 KY653129_p20 hypothetical protein singleton unknown function unknown function 1 11846 12016
ARM68527.1 KY653129_p58 endo-beta-N-acetylglucosaminidase phrog_759 tail associated cell-wall hydrolase other 1 37724 39658
ARM68503.1 KY653129_p34 hypothetical protein phrog_2538 terminase small subunit head and packaging 1 16454 16834
ARM68496.1 KY653129_p27 hypothetical protein phrog_98 unknown function unknown function 1 13964 14365
ARM68510.1 KY653129_p41 capsid and scaffold protein phrog_1161 head-tail adaptor connector 1 22262 22576
ARM68530.1 KY653129_p61 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis 1 42028 43737
ARM68472.1 KY653129_p3 hypothetical protein phrog_5375 unknown function unknown function -1 1806 2282
ARM68525.1 KY653129_p56 hypothetical protein phrog_2968 tail protein tail 1 36868 37302
ARM68528.1 KY653129_p59 tail fiber protein phrog_18372 tail fiber protein tail 1 39709 41679
ARM68498.1 KY653129_p29 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 14639 15061
ARM68480.1 KY653129_p11 hypothetical protein phrog_23956 unknown function unknown function 1 5639 5887
ARM68523.1 KY653129_p54 hypothetical protein phrog_1766 tail fiber protein tail 1 36364 36708
ARM68531.1 KY653129_p62 hypothetical protein phrog_27385 unknown function unknown function 1 43979 44194
ARM68504.1 KY653129_p35 terminase large subunit phrog_2 terminase large subunit head and packaging 1 16818 18083
ARM68488.1 KY653129_p19 hypothetical protein phrog_6999 unknown function unknown function 1 11647 11841
ARM68532.1 KY653129_p63 hypothetical protein phrog_3996 membrane protein moron, auxiliary metabolic gene and host takeover 1 44184 44639
ARM68494.1 KY653129_p25 hypothetical protein phrog_3683 unknown function unknown function 1 13580 13777
ARM68507.1 KY653129_p38 capsid and scaffold protein phrog_194 head scaffolding protein head and packaging 1 20522 21112
ARM68475.1 KY653129_p6 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3240 3476
ARM68526.1 KY653129_p57 hypothetical protein phrog_2990 unknown function unknown function 1 37286 37681
ARM68501.1 KY653129_p32 hypothetical protein phrog_152 RinB-like transcriptional activator transcription regulation 1 15545 15721
ARM68470.1 KY653129_p1 integrase phrog_1 integrase integration and excision -1 85 1110
ARM68481.1 KY653129_p12 hypothetical protein phrog_946 unknown function unknown function 1 5862 6122
ARM68492.1 KY653129_p23 DNA modification methyltransferase phrog_111 DNA methyltransferase other 1 12688 13122
ARM68502.1 KY653129_p33 hypothetical protein phrog_1058 unknown function unknown function 1 15723 16124
ARM68508.1 KY653129_p39 major capsid protein phrog_544 major head protein head and packaging 1 21134 21955
ARM68514.1 KY653129_p45 hypothetical protein phrog_176 tail terminator connector 1 24291 24713
ARM68495.1 KY653129_p26 hypothetical protein phrog_987 unknown function unknown function 1 13764 13943
ARM68484.1 KY653129_p15 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 8227 8772
ARM68499.1 KY653129_p30 hypothetical protein phrog_9042 unknown function unknown function 1 15101 15355
ARM68478.1 KY653129_p9 hypothetical protein phrog_823 unknown function unknown function 1 5074 5388
ARM68471.1 KY653129_p2 hypothetical protein phrog_11835 unknown function unknown function -1 1169 1804
ARM68490.1 KY653129_p21 hypothetical protein singleton unknown function unknown function 1 11991 12215
ARM68509.1 KY653129_p40 transcriptional terminator phrog_390 Arc-like repressor transcription regulation 1 21969 22262
ARM68513.1 KY653129_p44 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 23243 23902
ARM68519.1 KY653129_p50 hypothetical protein phrog_33 distal tail protein Dit tail 1 29380 30321
ARM68474.1 KY653129_p5 CI-like repressor phrog_8 transcriptional regulator transcription regulation -1 2774 3088
ARM68482.1 KY653129_p13 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6112 6813
ARM68486.1 KY653129_p17 DNA primase/helicase phrog_864 DNA primase DNA, RNA and nucleotide metabolism 1 9864 11063
ARM68512.1 KY653129_p43 capsid and scaffold protein phrog_5 tail completion or Neck1 protein connector 1 22928 23158
ARM68524.1 KY653129_p55 hypothetical protein phrog_134 unknown function unknown function 1 36692 36832
ARM68522.1 KY653129_p53 hypothetical protein phrog_257 minor tail protein tail 1 34851 36353
ARM68505.1 KY653129_p36 portal protein phrog_64 portal protein head and packaging 1 18084 19520
ARM68473.1 KY653129_p4 hypothetical protein phrog_87 metallo-protease other -1 2301 2762
ARM68500.1 KY653129_p31 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 15343 15552