Genomic map of Salmonella phage GJL01 (KY657202)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY657202
Definition
Salmonella phage GJL01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tempevirinae; Tlsvirus; unclassified Tlsvirus.
DB of origin
NUCCORE
Length
50407
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
42.84
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB06658.1 KY657202_p33 hypothetical protein phrog_6144 unknown function unknown function -1 26518 26946
ARB06640.1 KY657202_p15 hypothetical protein phrog_179 tail terminator connector -1 16011 16373
ARB06684.1 KY657202_p59 hypothetical protein phrog_6147 unknown function unknown function 1 36302 36583
ARB06683.1 KY657202_p58 hypothetical protein phrog_6503 unknown function unknown function 1 35850 36044
ARB06704.1 KY657202_p79 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation 1 48153 48761
ARB06636.1 KY657202_p11 tail length tape-measure protein phrog_24 tail length tape measure protein tail -1 11681 14590
ARB06654.1 KY657202_p29 hypothetical protein phrog_2919 unknown function unknown function -1 25575 25730
ARB06678.1 KY657202_p53 hypothetical protein phrog_4841 unknown function unknown function -1 33193 33732
ARB06627.1 KY657202_p2 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 2263 2709
ARB06691.1 KY657202_p66 hypothetical protein phrog_12725 unknown function unknown function 1 39007 39255
ARB06664.1 KY657202_p39 hypothetical protein phrog_9122 unknown function unknown function -1 28405 28599
ARB06635.1 KY657202_p10 tail tip assembly protein phrog_14 minor tail protein tail -1 11334 11681
ARB06655.1 KY657202_p30 hypothetical protein phrog_6666 unknown function unknown function -1 25747 25956
ARB06671.1 KY657202_p46 hypothetical protein phrog_17726 unknown function unknown function -1 30854 30961
ARB06667.1 KY657202_p42 hypothetical protein phrog_16293 unknown function unknown function -1 29479 29661
ARB06645.1 KY657202_p20 major capsid protein phrog_264 major head protein head and packaging -1 17994 18968
ARB06633.1 KY657202_p8 minor tail protein phrog_30 minor tail protein tail -1 9789 10511
ARB06673.1 KY657202_p48 hypothetical protein phrog_7116 unknown function unknown function -1 31381 31944
ARB06644.1 KY657202_p19 hypothetical protein phrog_2716 unknown function unknown function -1 17660 17932
ARB06649.1 KY657202_p24 head morphogenesis protein phrog_324 head morphogenesis head and packaging -1 21140 21811
ARB06666.1 KY657202_p41 kinase phrog_139 deoxynucleoside monophosphate kinase other -1 28911 29426
ARB06639.1 KY657202_p14 major tail protein phrog_584 major tail protein tail -1 15337 15996
ARB06699.1 KY657202_p74 hypothetical protein phrog_2676 unknown function unknown function -1 44323 44589
ARB06690.1 KY657202_p65 hypothetical protein phrog_2684 unknown function unknown function 1 38648 39010
ARB06657.1 KY657202_p32 hypothetical protein phrog_1312 unknown function unknown function -1 26320 26448
ARB06660.1 KY657202_p35 hypothetical protein phrog_6031 unknown function unknown function -1 27191 27400
ARB06688.1 KY657202_p63 hypothetical protein phrog_9323 unknown function unknown function 1 37456 37680
ARB06629.1 KY657202_p4 tail length tape-measure protein phrog_11265 tail length tape measure protein tail -1 3457 3747
ARB06646.1 KY657202_p21 hypothetical protein phrog_1989 unknown function unknown function -1 19058 19498
ARB06659.1 KY657202_p34 hypothetical protein phrog_11097 unknown function unknown function -1 26943 27194
ARB06634.1 KY657202_p9 minor tail protein phrog_18 minor tail protein tail -1 10508 11266
ARB06661.1 KY657202_p36 GntR-family transcriptional regulator phrog_13504 unknown function unknown function -1 27475 27972
ARB06643.1 KY657202_p18 hypothetical protein phrog_302 virion structural protein head and packaging -1 17194 17625
ARB06648.1 KY657202_p23 prohead protease phrog_530 head maturation protease head and packaging -1 20034 21143
ARB06697.1 KY657202_p72 phosphoesterase phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 42654 43769
ARB06672.1 KY657202_p47 hypothetical protein phrog_8382 unknown function unknown function -1 31037 31321
ARB06698.1 KY657202_p73 hypothetical protein phrog_2817 unknown function unknown function -1 43863 44141
ARB06696.1 KY657202_p71 holin phrog_2877 holin lysis -1 42326 42541
ARB06674.1 KY657202_p49 hypothetical protein phrog_13854 unknown function unknown function -1 32099 32359
ARB06628.1 KY657202_p3 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 2748 3410
ARB06679.1 KY657202_p54 hypothetical protein phrog_21159 unknown function unknown function 1 34350 34820
ARB06692.1 KY657202_p67 helicase phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 1 39323 40903
ARB06637.1 KY657202_p12 tape measure chaperone phrog_680 tail length tape measure protein tail -1 14628 14897
ARB06647.1 KY657202_p22 hypothetical protein phrog_1989 unknown function unknown function -1 19542 20021
ARB06626.1 KY657202_p1 hypothetical protein phrog_7239 unknown function unknown function 1 2077 2250
ARB06689.1 KY657202_p64 DNA cytosine methyltransferase phrog_757 DNA methyltransferase other 1 37880 38575
ARB06631.1 KY657202_p6 tail fiber protein phrog_31 central tail fiber J tail -1 5339 9115
ARB06703.1 KY657202_p78 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 46091 48064
ARB06670.1 KY657202_p45 polynucleotide kinase/phosphatase phrog_415 polynucleotide kinase other -1 30290 30850
ARB06687.1 KY657202_p62 polyribonucleotide nucleotidyltransferase phrog_4344 unknown function unknown function 1 37233 37454
ARB06705.1 KY657202_p80 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 48820 49746
ARB06685.1 KY657202_p60 hypothetical protein phrog_5016 unknown function unknown function 1 36583 36816
ARB06676.1 KY657202_p51 hypothetical protein phrog_18849 unknown function unknown function -1 32670 32903
ARB06652.1 KY657202_p27 terminase small subunit phrog_606 terminase small subunit head and packaging -1 24739 25263
ARB06702.1 KY657202_p77 endonuclease phrog_824 unknown function unknown function -1 45681 46088
ARB06700.1 KY657202_p75 Dam methylase phrog_111 DNA methyltransferase other -1 44592 45329
ARB06668.1 KY657202_p43 hypothetical protein phrog_35378 unknown function unknown function -1 29658 29939
ARB06662.1 KY657202_p37 hypothetical protein phrog_8758 unknown function unknown function -1 27984 28229
ARB06650.1 KY657202_p25 portal protein phrog_146 portal protein head and packaging -1 21808 23115
ARB06663.1 KY657202_p38 hypothetical protein phrog_14912 unknown function unknown function -1 28226 28408
ARB06695.1 KY657202_p70 endolysin phrog_7 endolysin lysis -1 41819 42265
ARB06701.1 KY657202_p76 hypothetical protein phrog_7420 unknown function unknown function -1 45331 45609
ARB06630.1 KY657202_p5 exodeoxyribonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 3823 4908
ARB06638.1 KY657202_p13 tape measure chaperone protein phrog_569 tail length tape measure protein tail -1 14945 15265
ARB06665.1 KY657202_p40 hypothetical protein phrog_25318 unknown function unknown function -1 28602 28832
ARB06653.1 KY657202_p28 hypothetical protein phrog_5976 unknown function unknown function -1 25351 25533
ARB06656.1 KY657202_p31 hypothetical protein phrog_303 unknown function unknown function -1 26091 26318
ARB06677.1 KY657202_p52 apolipoprotein N-acyltransferase phrog_38282 unknown function unknown function -1 32906 33190
ARB06681.1 KY657202_p56 hypothetical protein phrog_7421 unknown function unknown function 1 35396 35620
ARB06682.1 KY657202_p57 hypothetical protein phrog_14152 unknown function unknown function 1 35617 35853
ARB06669.1 KY657202_p44 hypothetical protein phrog_14011 unknown function unknown function -1 30017 30205
ARB06642.1 KY657202_p17 ribonucleoside-triphosphate reductase phrog_161 head closure Hc1 connector -1 16826 17197
ARB06675.1 KY657202_p50 hypothetical protein phrog_22864 unknown function unknown function 1 32428 32550
ARB06680.1 KY657202_p55 hypothetical protein phrog_1972 unknown function unknown function 1 35038 35322
ARB06686.1 KY657202_p61 hypothetical protein phrog_30800 unknown function unknown function 1 36813 37010
ARB06632.1 KY657202_p7 tail assembly protein phrog_32 tail assembly protein tail -1 9197 9661
ARB06693.1 KY657202_p68 hypothetical protein phrog_9539 unknown function unknown function 1 41222 41419
ARB06641.1 KY657202_p16 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 16393 16764
ARB06651.1 KY657202_p26 terminase large subunit phrog_38 terminase large subunit head and packaging -1 23156 24727
ARB06694.1 KY657202_p69 unimolecular spanin phrog_1804 Rz-like spanin lysis -1 41433 41822