Genomic map of Liberibacter phage P-JXGC-3 (KY661963)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY661963
Definition
Liberibacter phage P-JXGC-3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
31449
Host Name
Candidatus Liberibacter asiaticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
36
%GC
39.96
Number of singletons
8
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB06710.1 KY661963_p5 hypothetical protein singleton unknown function unknown function 1 3690 3929
ARB06709.1 KY661963_p4 hypothetical protein singleton unknown function unknown function 1 1909 2127
ARB06714.1 KY661963_p9 type I restriction-modification system, DNA-methyltransferase subunit M phrog_2713 unknown function unknown function -1 9052 10464
ARB06711.1 KY661963_p6 DNA helicase related protein singleton unknown function unknown function 1 3922 4149
ARB06724.1 KY661963_p19 hypothetical protein phrog_21367 unknown function unknown function 1 17627 17875
ARB06706.1 KY661963_p1 signal recognition particle receptor protein FtsY alpha subunit singleton unknown function unknown function 1 123 1202
ARB06727.1 KY661963_p22 hypothetical protein phrog_9415 unknown function unknown function -1 18768 19046
ARB06718.1 KY661963_p13 hypothetical protein singleton unknown function unknown function -1 13664 13780
ARB06726.1 KY661963_p21 hypothetical protein phrog_18707 anti-repressor transcription regulation 1 18352 18537
ARB06722.1 KY661963_p17 hypothetical protein phrog_9679 unknown function unknown function 1 16935 17327
ARB06740.1 KY661963_p35 guanylate kinase phrog_1815 guanylate kinase other 1 30304 30876
ARB06738.1 KY661963_p33 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 28646 29950
ARB06737.1 KY661963_p32 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 28269 28580
ARB06734.1 KY661963_p29 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 24782 25573
ARB06728.1 KY661963_p23 DNA primase/helicase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 19094 21463
ARB06730.1 KY661963_p25 hypothetical protein phrog_16809 unknown function unknown function -1 21871 22077
ARB06735.1 KY661963_p30 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25591 26241
ARB06707.1 KY661963_p2 hypothetical protein singleton unknown function unknown function -1 1371 1505
ARB06729.1 KY661963_p24 hypothetical protein phrog_17714 unknown function unknown function -1 21464 21853
ARB06739.1 KY661963_p34 hypothetical protein phrog_18456 DNA ligase DNA, RNA and nucleotide metabolism 1 29943 30302
ARB06741.1 KY661963_p36 hypothetical protein phrog_20262 unknown function unknown function 1 30948 31334
ARB06736.1 KY661963_p31 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 26245 28272
ARB06708.1 KY661963_p3 hypothetical protein singleton unknown function unknown function 1 1661 1906
ARB06725.1 KY661963_p20 hypothetical protein phrog_5070 unknown function unknown function 1 17907 18239
ARB06719.1 KY661963_p14 hypothetical protein phrog_1482 terminase small subunit head and packaging -1 13942 14451
ARB06731.1 KY661963_p26 hypothetical protein phrog_9679 unknown function unknown function 1 22533 22904
ARB06717.1 KY661963_p12 hypothetical protein singleton unknown function unknown function -1 13516 13674
ARB06732.1 KY661963_p27 hypothetical protein phrog_16052 unknown function unknown function 1 22994 23317
ARB06712.1 KY661963_p7 type I restriction-modification system, restriction subunit R phrog_3830 unknown function unknown function -1 4702 7752
ARB06716.1 KY661963_p11 terminase large subunit phrog_2 terminase large subunit head and packaging -1 12109 13407
ARB06733.1 KY661963_p28 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 23445 24611
ARB06713.1 KY661963_p8 type I restriction-modification system, specificity subunit S phrog_2668 unknown function unknown function -1 7756 8976
ARB06715.1 KY661963_p10 type I restriction-modification system, DNA-methyltransferase subunit M phrog_2713 unknown function unknown function -1 10479 11969
ARB06723.1 KY661963_p18 hypothetical protein phrog_21105 unknown function unknown function 1 17464 17670
ARB06721.1 KY661963_p16 hypothetical protein phrog_17944 unknown function unknown function 1 16631 16852
ARB06720.1 KY661963_p15 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 15876 16376