Genomic map of Escherichia phage phiLLS (KY677846)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY677846
Definition
Escherichia phage phiLLS, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Escherichia virus phiLLS.
DB of origin
NUCCORE
Length
107263
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
160
%GC
38.98
Number of singletons
2
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB06868.1 KY677846_p36 HNH endonuclease family protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29463 29954
ARB06908.1 KY677846_p80 hypothetical protein phrog_3909 unknown function unknown function 1 55994 56188
ARB06896.1 KY677846_p68 hypothetical protein phrog_5473 unknown function unknown function 1 50619 50804
ARB06976.1 KY677846_p148 major head protein precursor phrog_10 major head protein head and packaging 1 91072 92448
ARB06867.1 KY677846_p40 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33690 34190
ARB06975.1 KY677846_p147 prohead protease phrog_80 head maturation protease head and packaging 1 90422 91054
ARB06923.1 KY677846_p95 holin phrog_860 holin lysis 1 62573 63229
ARB06851.1 KY677846_p23 hypothetical protein phrog_643 transcriptional regulator transcription regulation -1 19606 19857
ARB06849.1 KY677846_p21 hypothetical protein phrog_3696 unknown function unknown function -1 18759 19055
ARB06978.1 KY677846_p150 hypothetical protein phrog_3725 tail completion or Neck1 protein connector 1 93020 93787
ARB06897.1 KY677846_p69 hypothetical protein phrog_3972 unknown function unknown function 1 50916 51263
ARB06889.1 KY677846_p61 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 47205 47723
ARB06967.1 KY677846_p139 hypothetical protein phrog_8596 unknown function unknown function -1 83935 84063
ARB06830.1 KY677846_p1 tail tip protein phrog_14572 tail fiber protein tail 1 116 1843
ARB06854.1 KY677846_p27 hypothetical protein phrog_2502 unknown function unknown function -1 24251 24643
ARB06862.1 KY677846_p37 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other 1 30140 30892
ARB06964.1 KY677846_p136 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover -1 83402 83647
ARB06898.1 KY677846_p70 hypothetical protein singleton unknown function unknown function 1 51525 51692
ARB06901.1 KY677846_p73 hypothetical protein phrog_28521 unknown function unknown function 1 53664 53795
ARB06944.1 KY677846_p116 terminase phrog_4605 unknown function unknown function 1 70690 71136
ARB06885.1 KY677846_p58 hypothetical protein phrog_200 lipoprotein other 1 44245 45192
ARB06969.1 KY677846_p141 super-infection exclusion protein phrog_4815 receptor binding tail protein tail 1 84592 86349
ARB06936.1 KY677846_p108 hypothetical protein phrog_23542 unknown function unknown function 1 68352 68513
ARB06937.1 KY677846_p109 tail sheath monomer phrog_4984 unknown function unknown function 1 68513 68794
ARB06952.1 KY677846_p124 hypothetical protein phrog_4379 unknown function unknown function -1 75517 75861
ARB06974.1 KY677846_p146 tail fibers protein phrog_2973 Hoc-like head decoration head and packaging 1 89924 90418
ARB06875.1 KY677846_p47 tail fibers protein phrog_4593 unknown function unknown function 1 38279 38557
ARB06946.1 KY677846_p118 minor tail protein phrog_6021 unknown function unknown function 1 71407 71640
ARB06971.1 KY677846_p143 terminase large subunit phrog_2 terminase large subunit head and packaging 1 86842 88158
ARB06871.1 KY677846_p43 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 35865 36704
ARB06929.1 KY677846_p101 major capsid protein phrog_7354 major head protein head and packaging 1 65433 65678
ARB06842.1 KY677846_p13 hypothetical protein phrog_35630 unknown function unknown function -1 12527 12856
ARB06880.1 KY677846_p52 hypothetical protein phrog_5252 unknown function unknown function 1 40514 40696
ARB06882.1 KY677846_p54 hypothetical protein phrog_1479 unknown function unknown function 1 41831 42148
ARB06918.1 KY677846_p90 hypothetical protein phrog_4243 unknown function unknown function 1 59667 60365
ARB06943.1 KY677846_p115 hypothetical protein phrog_6933 unknown function unknown function 1 70410 70688
ARB06986.1 KY677846_p158 tail protein phrog_31 central tail fiber J tail 1 101928 104777
ARB06962.1 KY677846_p134 baseplate wedge subunit phrog_4576 unknown function unknown function 1 82051 82443
ARB06906.1 KY677846_p78 hypothetical protein phrog_4760 unknown function unknown function 1 55402 55692
ARB06835.1 KY677846_p6 recombination endonuclease subunit D13 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 3923 5761
ARB06941.1 KY677846_p113 hypothetical protein phrog_4215 unknown function unknown function 1 69649 70110
ARB06968.1 KY677846_p140 receptor-blocking protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 84240 84506
ARB06921.1 KY677846_p93 deoxynucleoside-5-monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 61055 61807
ARB06894.1 KY677846_p66 hypothetical protein phrog_5876 unknown function unknown function 1 49505 49777
ARB06834.1 KY677846_p5 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 3437 3919
ARB06832.1 KY677846_p3 deoxyUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 2119 2565
ARB06903.1 KY677846_p75 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54133 54753
ARB06922.1 KY677846_p94 ATP-dependent Clp protease phrog_1827 ATP-dependent protease other 1 61820 62416
ARB06850.1 KY677846_p22 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 19092 19502
ARB06935.1 KY677846_p107 hypothetical protein phrog_3880 unknown function unknown function 1 68101 68352
ARB06949.1 KY677846_p121 hypothetical protein phrog_8583 unknown function unknown function 1 72522 73406
ARB06920.1 KY677846_p92 hypothetical protein phrog_812 Rz-like spanin lysis 1 60702 61055
ARB06919.1 KY677846_p91 terminase phrog_739 Rz-like spanin lysis 1 60322 60771
ARB06917.1 KY677846_p89 hypothetical protein phrog_5468 unknown function unknown function 1 59168 59512
ARB06847.1 KY677846_p18 NAD-dependent DNA ligase subunit A phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 17069 18040
ARB06980.1 KY677846_p152 major tail protein phrog_3575 major tail protein tail 1 94303 95709
ARB06954.1 KY677846_p126 hypothetical protein phrog_5607 unknown function unknown function -1 76078 76227
ARB06926.1 KY677846_p98 hypothetical protein phrog_4328 unknown function unknown function 1 64209 64640
ARB06855.1 KY677846_p28 hypothetical protein phrog_2502 unknown function unknown function -1 24653 25081
ARB06940.1 KY677846_p112 hypothetical protein phrog_5967 unknown function unknown function 1 69452 69652
ARB06963.1 KY677846_p135 minor tail protein phrog_415 polynucleotide kinase other 1 82518 83237
ARB06853.1 KY677846_p25 hypothetical protein phrog_5291 unknown function unknown function -1 20625 20867
ARB06970.1 KY677846_p142 hypothetical protein phrog_3802 terminase small subunit head and packaging 1 86360 86842
ARB06961.1 KY677846_p133 baseplate wedge subunit phrog_1745 DNA transfer protein other 1 80307 81977
ARB06973.1 KY677846_p145 portal protein phrog_12 portal protein head and packaging 1 88710 89927
ARB06966.1 KY677846_p138 tail fiber protein phrog_6369 unknown function unknown function -1 83828 83944
ARB06843.1 KY677846_p14 DNA replication primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 12885 13775
ARB06878.1 KY677846_p50 hypothetical protein singleton unknown function unknown function 1 39567 39713
ARB06932.1 KY677846_p104 serine/threonine protein phosphatase phrog_547 phosphoesterase other 1 66833 67423
ARB06983.1 KY677846_p155 hypothetical protein phrog_3914 tail assembly chaperone tail 1 97111 97443
ARB06844.1 KY677846_p15 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 13772 15244
ARB06953.1 KY677846_p125 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover -1 75863 76075
ARB06902.1 KY677846_p74 hypothetical protein phrog_2210 unknown function unknown function 1 53810 54004
ARB06869.1 KY677846_p41 aerobic ribonucleoside diphosphate reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 34190 35335
ARB06888.1 KY677846_p60 hypothetical protein phrog_8119 unknown function unknown function -1 45955 46938
ARB06927.1 KY677846_p99 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 64633 64923
ARB06891.1 KY677846_p63 hypothetical protein phrog_7716 unknown function unknown function 1 48225 48392
ARB06856.1 KY677846_p29 hypothetical protein phrog_1818 unknown function unknown function -1 25084 25590
ARB06879.1 KY677846_p51 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 39742 40443
ARB06859.1 KY677846_p32 hypothetical protein phrog_5827 unknown function unknown function -1 26574 26768
ARB06840.1 KY677846_p11 hypothetical protein phrog_4386 unknown function unknown function -1 9376 9873
ARB06988.1 KY677846_p160 tail protein phrog_1084 unknown function unknown function 1 106840 107262
ARB06933.1 KY677846_p105 hypothetical protein phrog_21849 unknown function unknown function 1 67416 67538
ARB06947.1 KY677846_p119 hypothetical protein phrog_5799 unknown function unknown function 1 71640 71825
ARB06904.1 KY677846_p76 hypothetical protein phrog_5598 unknown function unknown function 1 54834 55085
ARB06985.1 KY677846_p157 DNA polymerase I phrog_1302 distal tail protein tail 1 101317 101931
ARB06839.1 KY677846_p10 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 8027 9379
ARB06915.1 KY677846_p87 hypothetical protein phrog_5792 unknown function unknown function 1 58480 58776
ARB06887.1 KY677846_p59 hypothetical protein phrog_7894 unknown function unknown function -1 45517 45933
ARB06928.1 KY677846_p100 hypothetical protein phrog_6798 unknown function unknown function 1 65051 65428
ARB06848.1 KY677846_p20 hypothetical protein phrog_4053 transcriptional regulator transcription regulation -1 18400 18708
ARB06837.1 KY677846_p8 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 6756 7529
ARB06948.1 KY677846_p120 hypothetical protein phrog_5271 unknown function unknown function 1 71825 72385
ARB06874.1 KY677846_p46 ribonuclease H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 37726 38202
ARB06907.1 KY677846_p79 hypothetical protein phrog_17200 unknown function unknown function 1 55803 55886
ARB06858.1 KY677846_p31 Sir2-like protein phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 25750 26574
ARB06841.1 KY677846_p12 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 9866 12433
ARB06861.1 KY677846_p35 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 27395 29269
ARB06965.1 KY677846_p137 tail assembly protein phrog_5851 unknown function unknown function -1 83640 83831
ARB06984.1 KY677846_p156 pore-forming tail tip protein phrog_3779 tail length tape measure protein tail 1 97527 101207
ARB06870.1 KY677846_p42 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 35332 35865
ARB06960.1 KY677846_p132 membrane protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover 1 80013 80210
ARB06893.1 KY677846_p65 hypothetical protein phrog_4551 unknown function unknown function 1 48682 48957
ARB06977.1 KY677846_p149 hypothetical protein phrog_442 head-tail adaptor connector 1 92508 93020
ARB06981.1 KY677846_p153 minor tail protein phrog_3889 base plate tail tube protein tail 1 95714 96616
ARB06982.1 KY677846_p154 hypothetical protein phrog_313 Tail assembly chaperone tail 1 96609 97013
ARB06865.1 KY677846_p26 replication origin binding protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism -1 20842 23631
ARB06989.1 KY677846_p34 hypothetical protein phrog_11748 unknown function unknown function -1 26937 27296
ARB06916.1 KY677846_p88 hypothetical protein phrog_5265 unknown function unknown function 1 58773 59057
ARB06846.1 KY677846_p17 NAD-dependent DNA ligase subunit B phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 16087 16866
ARB06899.1 KY677846_p71 hypothetical protein phrog_18174 unknown function unknown function 1 51899 52057
ARB06950.1 KY677846_p123 hypothetical protein phrog_35622 unknown function unknown function -1 75362 75520
ARB06913.1 KY677846_p85 hypothetical protein phrog_4821 unknown function unknown function 1 57815 58114
ARB06972.1 KY677846_p144 hypothetical protein phrog_3497 unknown function unknown function 1 88273 88710
ARB06884.1 KY677846_p56 hypothetical protein phrog_5077 unknown function unknown function 1 42672 42842
ARB06931.1 KY677846_p103 hypothetical protein phrog_14979 unknown function unknown function 1 66544 66843
ARB06857.1 KY677846_p30 hypothetical protein phrog_5116 unknown function unknown function -1 25577 25759
ARB06881.1 KY677846_p53 hypothetical protein phrog_1491 tail fiber protein tail 1 40750 41388
ARB06955.1 KY677846_p127 hypothetical protein phrog_5145 unknown function unknown function -1 76274 76504
ARB06957.1 KY677846_p129 hypothetical protein phrog_4718 unknown function unknown function 1 78765 78968
ARB06912.1 KY677846_p84 hypothetical protein phrog_2855 unknown function unknown function 1 57541 57822
ARB06910.1 KY677846_p82 hypothetical protein phrog_4499 unknown function unknown function 1 56681 56995
ARB06914.1 KY677846_p86 hypothetical protein phrog_5486 unknown function unknown function 1 58107 58502
ARB06895.1 KY677846_p67 hypothetical protein phrog_5032 unknown function unknown function 1 49944 50462
ARB06838.1 KY677846_p9 hypothetical protein phrog_4258 unknown function unknown function -1 7522 7806
ARB06883.1 KY677846_p55 cell wall hydrolase SleB phrog_938 endolysin lysis 1 42154 42603
ARB06979.1 KY677846_p151 hypothetical protein phrog_3907 tail terminator connector 1 93791 94276
ARB06866.1 KY677846_p19 hypothetical protein phrog_35018 unknown function unknown function -1 18041 18313
ARB06845.1 KY677846_p16 portal vertex protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 15327 16094
ARB06892.1 KY677846_p64 hypothetical protein phrog_5153 unknown function unknown function 1 48385 48591
ARB06900.1 KY677846_p72 hypothetical protein phrog_6221 unknown function unknown function 1 52244 52411
ARB06833.1 KY677846_p4 flap endonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 2562 3437
ARB06951.1 KY677846_p122 hypothetical protein phrog_6973 unknown function unknown function -1 75140 75343
ARB06852.1 KY677846_p24 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism -1 19850 20554
ARB06831.1 KY677846_p2 hypothetical protein phrog_5592 unknown function unknown function -1 1899 2141
ARB06876.1 KY677846_p48 virion structural protein phrog_4516 unknown function unknown function 1 38641 39156
ARB06863.1 KY677846_p38 tail length tape-measure protein 1 phrog_5357 tail length tape measure protein tail 1 30894 31115
ARB06938.1 KY677846_p110 hypothetical protein phrog_4804 unknown function unknown function 1 68791 69036
ARB06860.1 KY677846_p33 hypothetical protein phrog_5236 unknown function unknown function -1 26737 26940
ARB06956.1 KY677846_p128 DNA N-6-adenine methyltransferase phrog_4263 unknown function unknown function -1 76622 77626
ARB06905.1 KY677846_p77 hypothetical protein phrog_5919 unknown function unknown function 1 55078 55242
ARB06836.1 KY677846_p7 calcineurin-like phosphoesterase superfamily domain protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 5742 6719
ARB06924.1 KY677846_p96 lysozyme phrog_465 endolysin lysis 1 63226 63639
ARB06930.1 KY677846_p102 serine/threonine-protein phosphatase 2 phrog_246 NinI-like serine-threonine phosphatase other 1 65681 66544
ARB06934.1 KY677846_p106 hypothetical protein phrog_4979 unknown function unknown function 1 67591 68022
ARB06939.1 KY677846_p111 hypothetical protein phrog_4731 unknown function unknown function 1 69026 69352
ARB06877.1 KY677846_p49 baseplate wedge subunit phrog_2380 unknown function unknown function 1 39220 39435
ARB06909.1 KY677846_p81 acetyltransferase-like protein phrog_1209 unknown function unknown function 1 56231 56599
ARB06911.1 KY677846_p83 hypothetical protein phrog_5021 unknown function unknown function 1 57117 57464
ARB06886.1 KY677846_p57 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 42842 43285
ARB06945.1 KY677846_p117 hypothetical protein phrog_9887 unknown function unknown function 1 71129 71419
ARB06873.1 KY677846_p45 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37181 37729
ARB06958.1 KY677846_p130 baseplate wedge protein phrog_3747 unknown function unknown function 1 79197 79448
ARB06890.1 KY677846_p62 hypothetical protein phrog_10617 unknown function unknown function 1 47937 48125
ARB06925.1 KY677846_p97 hypothetical protein phrog_5944 unknown function unknown function 1 63717 64133
ARB06959.1 KY677846_p131 virion structural protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 79547 79954
ARB06942.1 KY677846_p114 hypothetical protein phrog_4905 unknown function unknown function 1 70058 70429
ARB06872.1 KY677846_p44 hypothetical protein phrog_26840 unknown function unknown function 1 36805 37188
ARB06987.1 KY677846_p159 tail protein phrog_3890 straight fibre tail protein tail 1 104777 106834
ARB06864.1 KY677846_p39 aerobic ribonucleoside diphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 31258 33588