Genomic map of Citrobacter phage CF1 (KY694971)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY694971
Definition
Citrobacter phage CF1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Moonvirus; Citrobacter virus CF1.
DB of origin
NUCCORE
Length
50339
Host Name
Citrobacter freundii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
42.64
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARK07666.1 KY694971_p70 hypothetical protein phrog_1312 unknown function unknown function 1 39526 39654
ARK07636.1 KY694971_p40 hypothetical protein phrog_21333 unknown function unknown function -1 29993 30256
ARK07681.1 KY694971_p85 hypothetical protein phrog_161 head closure Hc1 connector 1 48780 49151
ARK07597.1 KY694971_p1 hypothetical protein phrog_569 tail length tape measure protein tail 1 379 693
ARK07615.1 KY694971_p19 DNA N-6-adenine methyltransferase phrog_111 DNA methyltransferase other 1 20306 21046
ARK07643.1 KY694971_p47 hypothetical protein phrog_4841 unknown function unknown function 1 32465 32908
ARK07653.1 KY694971_p57 hypothetical protein phrog_14011 unknown function unknown function 1 35732 35920
ARK07676.1 KY694971_p80 hypothetical protein phrog_1989 unknown function unknown function 1 45954 46433
ARK07629.1 KY694971_p33 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27355 27852
ARK07661.1 KY694971_p65 hypothetical protein phrog_8758 unknown function unknown function 1 37854 38102
ARK07603.1 KY694971_p7 tail assembly protein I phrog_32 tail assembly protein tail 1 5842 6441
ARK07675.1 KY694971_p79 capsid and scaffold protein phrog_530 head maturation protease head and packaging 1 44832 45941
ARK07619.1 KY694971_p23 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21740 22219
ARK07659.1 KY694971_p63 hypothetical protein phrog_20227 unknown function unknown function 1 37521 37685
ARK07642.1 KY694971_p46 hypothetical protein phrog_28623 unknown function unknown function 1 32166 32453
ARK07679.1 KY694971_p83 hypothetical protein phrog_2716 unknown function unknown function 1 48045 48317
ARK07674.1 KY694971_p78 minor capsid protein phrog_324 head morphogenesis head and packaging 1 44167 44835
ARK07671.1 KY694971_p75 terminase small subunit phrog_606 terminase small subunit head and packaging 1 40711 41235
ARK07609.1 KY694971_p13 tail fiber protein phrog_5481 tail fiber protein tail -1 13391 15733
ARK07657.1 KY694971_p61 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 36665 37240
ARK07664.1 KY694971_p68 hypothetical protein phrog_11097 unknown function unknown function 1 38892 39143
ARK07677.1 KY694971_p81 hypothetical protein phrog_1989 unknown function unknown function 1 46477 46917
ARK07665.1 KY694971_p69 hypothetical protein phrog_11192 unknown function unknown function 1 39140 39466
ARK07667.1 KY694971_p71 hypothetical protein phrog_303 unknown function unknown function 1 39656 39883
ARK07606.1 KY694971_p10 tail tape measure protein phrog_11265 tail length tape measure protein tail 1 11894 12184
ARK07660.1 KY694971_p64 hypothetical protein phrog_14912 unknown function unknown function 1 37678 37857
ARK07647.1 KY694971_p51 hypothetical protein phrog_1972 unknown function unknown function 1 33358 33639
ARK07625.1 KY694971_p29 hypothetical protein phrog_9539 unknown function unknown function -1 24946 25083
ARK07669.1 KY694971_p73 hypothetical protein phrog_2919 unknown function unknown function 1 40211 40393
ARK07668.1 KY694971_p72 hypothetical protein phrog_6666 unknown function unknown function 1 40018 40227
ARK07638.1 KY694971_p42 hypothetical protein phrog_6503 unknown function unknown function -1 30442 30636
ARK07650.1 KY694971_p54 hypothetical protein phrog_8382 unknown function unknown function 1 34681 35004
ARK07616.1 KY694971_p20 hypothetical protein phrog_2676 unknown function unknown function 1 21048 21278
ARK07620.1 KY694971_p24 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 22303 23418
ARK07672.1 KY694971_p76 ABC-type polar amino acid transport system, ATPase component phrog_38 terminase large subunit head and packaging 1 41247 42818
ARK07648.1 KY694971_p52 hypothetical protein phrog_13854 unknown function unknown function 1 33645 33902
ARK07608.1 KY694971_p12 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 12932 13357
ARK07611.1 KY694971_p15 hypothetical protein phrog_2856 transcriptional regulator transcription regulation -1 16874 17482
ARK07623.1 KY694971_p27 hypothetical protein phrog_1804 Rz-like spanin lysis 1 24245 24634
ARK07670.1 KY694971_p74 hypothetical protein phrog_5976 unknown function unknown function 1 40393 40623
ARK07621.1 KY694971_p25 holin phrog_2877 holin lysis 1 23530 23754
ARK07632.1 KY694971_p36 hypothetical protein phrog_9323 unknown function unknown function -1 29087 29311
ARK07651.1 KY694971_p55 hypothetical protein phrog_17726 unknown function unknown function 1 35077 35184
ARK07617.1 KY694971_p21 hypothetical protein phrog_2180 unknown function unknown function 1 21317 21514
ARK07628.1 KY694971_p32 hypothetical protein phrog_12725 unknown function unknown function -1 27110 27358
ARK07635.1 KY694971_p39 hypothetical protein phrog_5016 unknown function unknown function -1 29757 29993
ARK07622.1 KY694971_p26 lysin phrog_7 endolysin lysis 1 23754 24248
ARK07663.1 KY694971_p67 hypothetical protein phrog_6031 unknown function unknown function 1 38685 38888
ARK07601.1 KY694971_p5 minor tail protein phrog_18 minor tail protein tail 1 4372 5130
ARK07634.1 KY694971_p38 hypothetical protein phrog_16768 unknown function unknown function -1 29593 29760
ARK07680.1 KY694971_p84 hypothetical protein phrog_302 virion structural protein head and packaging 1 48352 48783
ARK07658.1 KY694971_p62 hypothetical protein phrog_9122 unknown function unknown function 1 37321 37518
ARK07627.1 KY694971_p31 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 25462 27042
ARK07613.1 KY694971_p17 hypothetical protein phrog_824 unknown function unknown function 1 19547 19954
ARK07683.1 KY694971_p87 hypothetical protein phrog_179 tail terminator connector 1 49574 49966
ARK07614.1 KY694971_p18 hypothetical protein phrog_7420 unknown function unknown function 1 20026 20304
ARK07682.1 KY694971_p86 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 49144 49584
ARK07654.1 KY694971_p58 hypothetical protein phrog_9755 unknown function unknown function 1 35931 36116
ARK07673.1 KY694971_p77 portal protein phrog_146 portal protein head and packaging 1 42818 44167
ARK07652.1 KY694971_p56 3'-phosphatase, 5'-polynucleotide kinase phrog_415 polynucleotide kinase other 1 35188 35751
ARK07612.1 KY694971_p16 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 17571 19544
ARK07639.1 KY694971_p43 hypothetical protein phrog_14152 unknown function unknown function -1 30633 30866
ARK07602.1 KY694971_p6 tail assembly protein phrog_30 minor tail protein tail 1 5127 5849
ARK07610.1 KY694971_p14 DNA primase/helicase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 15888 16814
ARK07646.1 KY694971_p50 hypothetical protein phrog_4653 unknown function unknown function 1 33216 33374
ARK07599.1 KY694971_p3 tail length tape-measure protein 1 phrog_24 tail length tape measure protein tail 1 1048 3957
ARK07626.1 KY694971_p30 hypothetical protein phrog_2794 unknown function unknown function -1 25067 25459
ARK07640.1 KY694971_p44 hypothetical protein phrog_7421 unknown function unknown function -1 30863 31081
ARK07598.1 KY694971_p2 hypothetical protein phrog_680 tail length tape measure protein tail 1 843 1010
ARK07678.1 KY694971_p82 hypothetical protein phrog_264 major head protein head and packaging 1 47008 47982
ARK07645.1 KY694971_p49 hypothetical protein phrog_22864 unknown function unknown function -1 33025 33147
ARK07649.1 KY694971_p53 hypothetical protein phrog_7116 unknown function unknown function 1 34055 34621
ARK07633.1 KY694971_p37 hypothetical protein phrog_4344 unknown function unknown function -1 29313 29534
ARK07655.1 KY694971_p59 hypothetical protein phrog_22783 unknown function unknown function 1 36194 36490
ARK07624.1 KY694971_p28 hypothetical protein phrog_10679 unknown function unknown function -1 24648 24869
ARK07604.1 KY694971_p8 tail fiber protein phrog_31 central tail fiber J tail 1 6523 10299
ARK07618.1 KY694971_p22 hypothetical protein phrog_2817 unknown function unknown function 1 21501 21737
ARK07605.1 KY694971_p9 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 10761 11816
ARK07600.1 KY694971_p4 minor tail protein phrog_14 minor tail protein tail 1 3957 4304
ARK07637.1 KY694971_p41 hypothetical protein phrog_32259 unknown function unknown function -1 30341 30442
ARK07644.1 KY694971_p48 hypothetical protein phrog_22353 unknown function unknown function 1 32905 33012
ARK07630.1 KY694971_p34 hypothetical protein phrog_2684 unknown function unknown function -1 27849 28211
ARK07641.1 KY694971_p45 hypothetical protein phrog_7287 unknown function unknown function -1 31156 31440
ARK07607.1 KY694971_p11 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 12231 12893
ARK07631.1 KY694971_p35 hypothetical protein phrog_757 DNA methyltransferase other -1 28284 28979
ARK07656.1 KY694971_p60 hypothetical protein phrog_16293 unknown function unknown function 1 36490 36672
ARK07662.1 KY694971_p66 hypothetical protein phrog_13504 unknown function unknown function 1 38114 38611