| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY694971 |
Definition |
Citrobacter phage CF1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Moonvirus; Citrobacter virus CF1. |
DB of origin |
NUCCORE |
Length |
50339 |
Host Name |
Citrobacter freundii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
42.64 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARK07666.1 | KY694971_p70 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 39526 | 39654 |
| ARK07636.1 | KY694971_p40 | hypothetical protein | phrog_21333 | unknown function | unknown function | -1 | 29993 | 30256 |
| ARK07681.1 | KY694971_p85 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 48780 | 49151 |
| ARK07597.1 | KY694971_p1 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 379 | 693 |
| ARK07615.1 | KY694971_p19 | DNA N-6-adenine methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 20306 | 21046 |
| ARK07643.1 | KY694971_p47 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 32465 | 32908 |
| ARK07653.1 | KY694971_p57 | hypothetical protein | phrog_14011 | unknown function | unknown function | 1 | 35732 | 35920 |
| ARK07676.1 | KY694971_p80 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 45954 | 46433 |
| ARK07629.1 | KY694971_p33 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27355 | 27852 |
| ARK07661.1 | KY694971_p65 | hypothetical protein | phrog_8758 | unknown function | unknown function | 1 | 37854 | 38102 |
| ARK07603.1 | KY694971_p7 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 5842 | 6441 |
| ARK07675.1 | KY694971_p79 | capsid and scaffold protein | phrog_530 | head maturation protease | head and packaging | 1 | 44832 | 45941 |
| ARK07619.1 | KY694971_p23 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21740 | 22219 |
| ARK07659.1 | KY694971_p63 | hypothetical protein | phrog_20227 | unknown function | unknown function | 1 | 37521 | 37685 |
| ARK07642.1 | KY694971_p46 | hypothetical protein | phrog_28623 | unknown function | unknown function | 1 | 32166 | 32453 |
| ARK07679.1 | KY694971_p83 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 48045 | 48317 |
| ARK07674.1 | KY694971_p78 | minor capsid protein | phrog_324 | head morphogenesis | head and packaging | 1 | 44167 | 44835 |
| ARK07671.1 | KY694971_p75 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 40711 | 41235 |
| ARK07609.1 | KY694971_p13 | tail fiber protein | phrog_5481 | tail fiber protein | tail | -1 | 13391 | 15733 |
| ARK07657.1 | KY694971_p61 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 36665 | 37240 |
| ARK07664.1 | KY694971_p68 | hypothetical protein | phrog_11097 | unknown function | unknown function | 1 | 38892 | 39143 |
| ARK07677.1 | KY694971_p81 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 46477 | 46917 |
| ARK07665.1 | KY694971_p69 | hypothetical protein | phrog_11192 | unknown function | unknown function | 1 | 39140 | 39466 |
| ARK07667.1 | KY694971_p71 | hypothetical protein | phrog_303 | unknown function | unknown function | 1 | 39656 | 39883 |
| ARK07606.1 | KY694971_p10 | tail tape measure protein | phrog_11265 | tail length tape measure protein | tail | 1 | 11894 | 12184 |
| ARK07660.1 | KY694971_p64 | hypothetical protein | phrog_14912 | unknown function | unknown function | 1 | 37678 | 37857 |
| ARK07647.1 | KY694971_p51 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 33358 | 33639 |
| ARK07625.1 | KY694971_p29 | hypothetical protein | phrog_9539 | unknown function | unknown function | -1 | 24946 | 25083 |
| ARK07669.1 | KY694971_p73 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 40211 | 40393 |
| ARK07668.1 | KY694971_p72 | hypothetical protein | phrog_6666 | unknown function | unknown function | 1 | 40018 | 40227 |
| ARK07638.1 | KY694971_p42 | hypothetical protein | phrog_6503 | unknown function | unknown function | -1 | 30442 | 30636 |
| ARK07650.1 | KY694971_p54 | hypothetical protein | phrog_8382 | unknown function | unknown function | 1 | 34681 | 35004 |
| ARK07616.1 | KY694971_p20 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 21048 | 21278 |
| ARK07620.1 | KY694971_p24 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 22303 | 23418 |
| ARK07672.1 | KY694971_p76 | ABC-type polar amino acid transport system, ATPase component | phrog_38 | terminase large subunit | head and packaging | 1 | 41247 | 42818 |
| ARK07648.1 | KY694971_p52 | hypothetical protein | phrog_13854 | unknown function | unknown function | 1 | 33645 | 33902 |
| ARK07608.1 | KY694971_p12 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12932 | 13357 |
| ARK07611.1 | KY694971_p15 | hypothetical protein | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 16874 | 17482 |
| ARK07623.1 | KY694971_p27 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | 1 | 24245 | 24634 |
| ARK07670.1 | KY694971_p74 | hypothetical protein | phrog_5976 | unknown function | unknown function | 1 | 40393 | 40623 |
| ARK07621.1 | KY694971_p25 | holin | phrog_2877 | holin | lysis | 1 | 23530 | 23754 |
| ARK07632.1 | KY694971_p36 | hypothetical protein | phrog_9323 | unknown function | unknown function | -1 | 29087 | 29311 |
| ARK07651.1 | KY694971_p55 | hypothetical protein | phrog_17726 | unknown function | unknown function | 1 | 35077 | 35184 |
| ARK07617.1 | KY694971_p21 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 21317 | 21514 |
| ARK07628.1 | KY694971_p32 | hypothetical protein | phrog_12725 | unknown function | unknown function | -1 | 27110 | 27358 |
| ARK07635.1 | KY694971_p39 | hypothetical protein | phrog_5016 | unknown function | unknown function | -1 | 29757 | 29993 |
| ARK07622.1 | KY694971_p26 | lysin | phrog_7 | endolysin | lysis | 1 | 23754 | 24248 |
| ARK07663.1 | KY694971_p67 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 38685 | 38888 |
| ARK07601.1 | KY694971_p5 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 4372 | 5130 |
| ARK07634.1 | KY694971_p38 | hypothetical protein | phrog_16768 | unknown function | unknown function | -1 | 29593 | 29760 |
| ARK07680.1 | KY694971_p84 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 48352 | 48783 |
| ARK07658.1 | KY694971_p62 | hypothetical protein | phrog_9122 | unknown function | unknown function | 1 | 37321 | 37518 |
| ARK07627.1 | KY694971_p31 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25462 | 27042 |
| ARK07613.1 | KY694971_p17 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 19547 | 19954 |
| ARK07683.1 | KY694971_p87 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 49574 | 49966 |
| ARK07614.1 | KY694971_p18 | hypothetical protein | phrog_7420 | unknown function | unknown function | 1 | 20026 | 20304 |
| ARK07682.1 | KY694971_p86 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 49144 | 49584 |
| ARK07654.1 | KY694971_p58 | hypothetical protein | phrog_9755 | unknown function | unknown function | 1 | 35931 | 36116 |
| ARK07673.1 | KY694971_p77 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 42818 | 44167 |
| ARK07652.1 | KY694971_p56 | 3'-phosphatase, 5'-polynucleotide kinase | phrog_415 | polynucleotide kinase | other | 1 | 35188 | 35751 |
| ARK07612.1 | KY694971_p16 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 17571 | 19544 |
| ARK07639.1 | KY694971_p43 | hypothetical protein | phrog_14152 | unknown function | unknown function | -1 | 30633 | 30866 |
| ARK07602.1 | KY694971_p6 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 5127 | 5849 |
| ARK07610.1 | KY694971_p14 | DNA primase/helicase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 15888 | 16814 |
| ARK07646.1 | KY694971_p50 | hypothetical protein | phrog_4653 | unknown function | unknown function | 1 | 33216 | 33374 |
| ARK07599.1 | KY694971_p3 | tail length tape-measure protein 1 | phrog_24 | tail length tape measure protein | tail | 1 | 1048 | 3957 |
| ARK07626.1 | KY694971_p30 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 25067 | 25459 |
| ARK07640.1 | KY694971_p44 | hypothetical protein | phrog_7421 | unknown function | unknown function | -1 | 30863 | 31081 |
| ARK07598.1 | KY694971_p2 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 843 | 1010 |
| ARK07678.1 | KY694971_p82 | hypothetical protein | phrog_264 | major head protein | head and packaging | 1 | 47008 | 47982 |
| ARK07645.1 | KY694971_p49 | hypothetical protein | phrog_22864 | unknown function | unknown function | -1 | 33025 | 33147 |
| ARK07649.1 | KY694971_p53 | hypothetical protein | phrog_7116 | unknown function | unknown function | 1 | 34055 | 34621 |
| ARK07633.1 | KY694971_p37 | hypothetical protein | phrog_4344 | unknown function | unknown function | -1 | 29313 | 29534 |
| ARK07655.1 | KY694971_p59 | hypothetical protein | phrog_22783 | unknown function | unknown function | 1 | 36194 | 36490 |
| ARK07624.1 | KY694971_p28 | hypothetical protein | phrog_10679 | unknown function | unknown function | -1 | 24648 | 24869 |
| ARK07604.1 | KY694971_p8 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 6523 | 10299 |
| ARK07618.1 | KY694971_p22 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 21501 | 21737 |
| ARK07605.1 | KY694971_p9 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 10761 | 11816 |
| ARK07600.1 | KY694971_p4 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 3957 | 4304 |
| ARK07637.1 | KY694971_p41 | hypothetical protein | phrog_32259 | unknown function | unknown function | -1 | 30341 | 30442 |
| ARK07644.1 | KY694971_p48 | hypothetical protein | phrog_22353 | unknown function | unknown function | 1 | 32905 | 33012 |
| ARK07630.1 | KY694971_p34 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 27849 | 28211 |
| ARK07641.1 | KY694971_p45 | hypothetical protein | phrog_7287 | unknown function | unknown function | -1 | 31156 | 31440 |
| ARK07607.1 | KY694971_p11 | recombinase | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 12231 | 12893 |
| ARK07631.1 | KY694971_p35 | hypothetical protein | phrog_757 | DNA methyltransferase | other | -1 | 28284 | 28979 |
| ARK07656.1 | KY694971_p60 | hypothetical protein | phrog_16293 | unknown function | unknown function | 1 | 36490 | 36672 |
| ARK07662.1 | KY694971_p66 | hypothetical protein | phrog_13504 | unknown function | unknown function | 1 | 38114 | 38611 |