| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY705259 |
Definition |
Streptococcus phage P5641, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
37235 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
38.84 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARU13361.1 | KY705259_p13 | tail chaperone protein | phrog_1346 | tail protein | tail | 1 | 7876 | 8229 |
| ARU13365.1 | KY705259_p17 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14791 | 18615 |
| ARU13355.1 | KY705259_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4502 | 5695 |
| ARU13360.1 | KY705259_p12 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7194 | 7802 |
| ARU13382.1 | KY705259_p34 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 27175 | 27309 |
| ARU13364.1 | KY705259_p16 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13226 | 14791 |
| ARU13356.1 | KY705259_p8 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5710 | 6027 |
| ARU13387.1 | KY705259_p39 | nuclease | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30355 | 31191 |
| ARU13377.1 | KY705259_p29 | hypothetical protein | phrog_2277 | unknown function | unknown function | 1 | 24731 | 24907 |
| ARU13389.1 | KY705259_p41 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31667 | 32221 |
| ARU13353.1 | KY705259_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2672 | 3832 |
| ARU13400.1 | KY705259_p52 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36632 | 37141 |
| ARU13376.1 | KY705259_p28 | hypothetical protein | phrog_11483 | unknown function | unknown function | 1 | 24497 | 24685 |
| ARU13373.1 | KY705259_p25 | hypothetical protein | phrog_13146 | unknown function | unknown function | 1 | 23326 | 23616 |
| ARU13368.1 | KY705259_p20 | hypothetical protein | phrog_1382 | unknown function | unknown function | 1 | 21058 | 21198 |
| ARU13350.1 | KY705259_p2 | TerL | phrog_4914 | terminase large subunit | head and packaging | 1 | 590 | 1279 |
| ARU13367.1 | KY705259_p19 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20646 | 21032 |
| ARU13390.1 | KY705259_p42 | endodeoxyribonuclease RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32218 | 32628 |
| ARU13378.1 | KY705259_p30 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25087 | 25290 |
| ARU13349.1 | KY705259_p1 | TerS | phrog_83 | terminase small subunit | head and packaging | 1 | 88 | 549 |
| ARU13381.1 | KY705259_p33 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 26932 | 27141 |
| ARU13393.1 | KY705259_p45 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 33080 | 33463 |
| ARU13395.1 | KY705259_p47 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33968 | 34474 |
| ARU13357.1 | KY705259_p9 | head-tail connector protein | phrog_25 | head closure Hc1 | connector | 1 | 6020 | 6370 |
| ARU13359.1 | KY705259_p11 | tail component | phrog_1217 | tail protein | tail | 1 | 6804 | 7175 |
| ARU13380.1 | KY705259_p32 | hypothetical protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 26268 | 26810 |
| ARU13398.1 | KY705259_p50 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 35163 | 35849 |
| ARU13388.1 | KY705259_p40 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31206 | 31652 |
| ARU13354.1 | KY705259_p6 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 3819 | 4487 |
| ARU13374.1 | KY705259_p26 | hypothetical protein | phrog_4964 | unknown function | unknown function | 1 | 23642 | 24193 |
| ARU13384.1 | KY705259_p36 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 28436 | 29218 |
| ARU13396.1 | KY705259_p48 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 34449 | 34751 |
| ARU13351.1 | KY705259_p3 | TerL | phrog_9 | terminase large subunit | head and packaging | 1 | 1362 | 2471 |
| ARU13397.1 | KY705259_p49 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 34748 | 35161 |
| ARU13385.1 | KY705259_p37 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 29215 | 29391 |
| ARU13372.1 | KY705259_p24 | hypothetical protein | phrog_8487 | unknown function | unknown function | 1 | 22972 | 23307 |
| ARU13358.1 | KY705259_p10 | tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6377 | 6799 |
| ARU13375.1 | KY705259_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24219 | 24362 |
| ARU13383.1 | KY705259_p35 | DNA replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 27617 | 28423 |
| ARU13391.1 | KY705259_p43 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 32612 | 32848 |
| ARU13371.1 | KY705259_p23 | lysin | phrog_291 | endolysin | lysis | 1 | 21754 | 22653 |
| ARU13386.1 | KY705259_p38 | RecT recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29535 | 30362 |
| ARU13352.1 | KY705259_p4 | head-tail connector protein | phrog_1142 | unknown function | unknown function | 1 | 2475 | 2654 |
| ARU13363.1 | KY705259_p15 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8448 | 13229 |
| ARU13399.1 | KY705259_p51 | late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 36122 | 36520 |
| ARU13392.1 | KY705259_p44 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 32890 | 33042 |
| ARU13369.1 | KY705259_p21 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 21224 | 21499 |
| ARU13379.1 | KY705259_p31 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 25331 | 26275 |
| ARU13366.1 | KY705259_p18 | baseplate component | phrog_372 | tail protein | tail | 1 | 18618 | 20630 |
| ARU13362.1 | KY705259_p14 | hypothetical protein | phrog_2629 | unknown function | unknown function | 1 | 8277 | 8420 |
| ARU13370.1 | KY705259_p22 | holin | phrog_297 | holin | lysis | 1 | 21496 | 21723 |
| ARU13394.1 | KY705259_p46 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 33473 | 33967 |