| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY705261 |
Definition |
Streptococcus phage P5652, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
33448 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
39.28 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARU13451.1 | KY705261_p8 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5708 | 6022 |
| ARU13454.1 | KY705261_p11 | tail component | phrog_1217 | tail protein | tail | 1 | 6806 | 7177 |
| ARU13486.1 | KY705261_p43 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 32845 | 33354 |
| ARU13458.1 | KY705261_p15 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8450 | 13225 |
| ARU13478.1 | KY705261_p35 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28138 | 29649 |
| ARU13469.1 | KY705261_p26 | hypothetical protein | phrog_13951 | unknown function | unknown function | 1 | 22542 | 22691 |
| ARU13462.1 | KY705261_p19 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20017 | 20445 |
| ARU13485.1 | KY705261_p42 | late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 32337 | 32735 |
| ARU13452.1 | KY705261_p9 | head-tail connector protein | phrog_25 | head closure Hc1 | connector | 1 | 6022 | 6372 |
| ARU13464.1 | KY705261_p21 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 20631 | 20954 |
| ARU13471.1 | KY705261_p28 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 23577 | 23780 |
| ARU13475.1 | KY705261_p32 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 25540 | 26871 |
| ARU13483.1 | KY705261_p40 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 31068 | 31358 |
| ARU13474.1 | KY705261_p31 | DNA binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 24864 | 25565 |
| ARU13470.1 | KY705261_p27 | hypothetical protein | phrog_4964 | unknown function | unknown function | 1 | 22840 | 23391 |
| ARU13481.1 | KY705261_p38 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 30440 | 30595 |
| ARU13473.1 | KY705261_p30 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 24394 | 24867 |
| ARU13448.1 | KY705261_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2670 | 3830 |
| ARU13465.1 | KY705261_p22 | holin | phrog_297 | holin | lysis | 1 | 20951 | 21193 |
| ARU13466.1 | KY705261_p23 | lysin | phrog_998 | endolysin | lysis | 1 | 21195 | 21797 |
| ARU13453.1 | KY705261_p10 | tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6379 | 6801 |
| ARU13484.1 | KY705261_p41 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 31362 | 32069 |
| ARU13477.1 | KY705261_p34 | primase | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 27336 | 28151 |
| ARU13457.1 | KY705261_p14 | hypothetical protein | phrog_2629 | unknown function | unknown function | 1 | 8279 | 8422 |
| ARU13444.1 | KY705261_p1 | TerS | phrog_83 | terminase small subunit | head and packaging | 1 | 86 | 547 |
| ARU13468.1 | KY705261_p25 | lysin | phrog_4238 | endolysin | lysis | 1 | 22072 | 22299 |
| ARU13482.1 | KY705261_p39 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30596 | 31096 |
| ARU13467.1 | KY705261_p24 | hypothetical protein | phrog_8818 | unknown function | unknown function | 1 | 21863 | 21979 |
| ARU13450.1 | KY705261_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4500 | 5693 |
| ARU13447.1 | KY705261_p4 | head-tail connector protein | phrog_1142 | unknown function | unknown function | 1 | 2473 | 2652 |
| ARU13449.1 | KY705261_p6 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 3817 | 4485 |
| ARU13460.1 | KY705261_p17 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14787 | 17966 |
| ARU13472.1 | KY705261_p29 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 23990 | 24124 |
| ARU13476.1 | KY705261_p33 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26878 | 27333 |
| ARU13455.1 | KY705261_p12 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7196 | 7804 |
| ARU13461.1 | KY705261_p18 | baseplate component | phrog_372 | tail protein | tail | 1 | 17966 | 20002 |
| ARU13446.1 | KY705261_p3 | TerL | phrog_9 | terminase large subunit | head and packaging | 1 | 1450 | 2469 |
| ARU13463.1 | KY705261_p20 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 20471 | 20617 |
| ARU13445.1 | KY705261_p2 | TerL | phrog_4914 | terminase large subunit | head and packaging | 1 | 588 | 1277 |
| ARU13479.1 | KY705261_p36 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29903 | 30226 |
| ARU13480.1 | KY705261_p37 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 30207 | 30455 |
| ARU13456.1 | KY705261_p13 | tail chaperone protein | phrog_1346 | tail protein | tail | 1 | 7878 | 8231 |
| ARU13459.1 | KY705261_p16 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13222 | 14787 |