| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY705278 |
Definition |
Streptococcus phage P7952, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Brussowvirus; unclassified Brussowvirus. |
DB of origin |
NUCCORE |
Length |
37594 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
39.02 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARU14257.1 | KY705278_p25 | lysin | phrog_8577 | endolysin | lysis | 1 | 23537 | 24922 |
| ARU14251.1 | KY705278_p19 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 15536 | 20374 |
| ARU14279.1 | KY705278_p47 | hypothetical protein | phrog_23816 | unknown function | unknown function | -1 | 36817 | 37047 |
| ARU14234.1 | KY705278_p2 | TerL | phrog_2 | terminase large subunit | head and packaging | 1 | 547 | 1218 |
| ARU14247.1 | KY705278_p15 | tail chaperone protein | phrog_183 | tail chaperone protein | tail | 1 | 8860 | 9213 |
| ARU14261.1 | KY705278_p29 | hypothetical protein | phrog_25718 | unknown function | unknown function | -1 | 26953 | 27171 |
| ARU14258.1 | KY705278_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24990 | 25118 |
| ARU14264.1 | KY705278_p32 | hypothetical protein | phrog_28129 | unknown function | unknown function | 1 | 27928 | 28074 |
| ARU14265.1 | KY705278_p33 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 28202 | 28411 |
| ARU14246.1 | KY705278_p14 | major tail protein | phrog_238 | major tail protein | tail | 1 | 8276 | 8785 |
| ARU14249.1 | KY705278_p17 | tape measure protein | phrog_1204 | tail protein | tail | 1 | 9583 | 13995 |
| ARU14266.1 | KY705278_p34 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 28484 | 28621 |
| ARU14237.1 | KY705278_p5 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 3590 | 4483 |
| ARU14240.1 | KY705278_p8 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 5650 | 6696 |
| ARU14242.1 | KY705278_p10 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 6881 | 7222 |
| ARU14276.1 | KY705278_p44 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35109 | 35612 |
| ARU14256.1 | KY705278_p24 | holin | phrog_297 | holin | lysis | 1 | 23284 | 23511 |
| ARU14267.1 | KY705278_p35 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 28894 | 29367 |
| ARU14277.1 | KY705278_p45 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 35584 | 35820 |
| ARU14253.1 | KY705278_p21 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 22435 | 22782 |
| ARU14238.1 | KY705278_p6 | scaffolding protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 4671 | 5252 |
| ARU14260.1 | KY705278_p28 | transposase | phrog_506 | transposase | integration and excision | 1 | 25627 | 26736 |
| ARU14280.1 | KY705278_p48 | ArpU late transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 37107 | 37520 |
| ARU14252.1 | KY705278_p20 | baseplate component | phrog_372 | tail protein | tail | 1 | 20375 | 22417 |
| ARU14270.1 | KY705278_p38 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31378 | 31833 |
| ARU14275.1 | KY705278_p43 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 34953 | 35108 |
| ARU14248.1 | KY705278_p16 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 9276 | 9593 |
| ARU14259.1 | KY705278_p27 | transposase | phrog_2577 | transposase | integration and excision | 1 | 25229 | 25630 |
| ARU14250.1 | KY705278_p18 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13995 | 15536 |
| ARU14274.1 | KY705278_p42 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 34720 | 34968 |
| ARU14243.1 | KY705278_p11 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 7219 | 7533 |
| ARU14273.1 | KY705278_p41 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34416 | 34739 |
| ARU14236.1 | KY705278_p4 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 2088 | 3593 |
| ARU14263.1 | KY705278_p31 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 27471 | 27944 |
| ARU14233.1 | KY705278_p1 | TerS | phrog_51 | terminase small subunit | head and packaging | 1 | 108 | 560 |
| ARU14235.1 | KY705278_p3 | TerL | phrog_5653 | terminase large subunit | head and packaging | 1 | 1492 | 2079 |
| ARU14272.1 | KY705278_p40 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 32638 | 34155 |
| ARU14255.1 | KY705278_p23 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 22964 | 23287 |
| ARU14239.1 | KY705278_p7 | minor capsid protein | phrog_909 | major head protein | head and packaging | 1 | 5273 | 5632 |
| ARU14278.1 | KY705278_p46 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 35824 | 36531 |
| ARU14241.1 | KY705278_p9 | hypothetical protein | phrog_5279 | unknown function | unknown function | 1 | 6708 | 6869 |
| ARU14254.1 | KY705278_p22 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 22800 | 22946 |
| ARU14268.1 | KY705278_p36 | DNA binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29364 | 30065 |
| ARU14271.1 | KY705278_p39 | primase | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 31836 | 32651 |
| ARU14262.1 | KY705278_p30 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 27242 | 27445 |
| ARU14245.1 | KY705278_p13 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 7876 | 8262 |
| ARU14244.1 | KY705278_p12 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7535 | 7879 |
| ARU14269.1 | KY705278_p37 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 30040 | 31371 |