| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY705287 |
Definition |
Streptococcus phage P9854, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
36979 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
38.93 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARU14678.1 | KY705287_p33 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 27615 | 28088 |
| ARU14679.1 | KY705287_p34 | DNA binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28085 | 28786 |
| ARU14691.1 | KY705287_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35623 | 35862 |
| ARU14687.1 | KY705287_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33810 | 33953 |
| ARU14658.1 | KY705287_p13 | major tail protein | phrog_88 | major tail protein | tail | 1 | 8310 | 8921 |
| ARU14663.1 | KY705287_p18 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 15942 | 20303 |
| ARU14684.1 | KY705287_p39 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33123 | 33443 |
| ARU14686.1 | KY705287_p41 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 33654 | 33809 |
| ARU14665.1 | KY705287_p20 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 22338 | 22724 |
| ARU14685.1 | KY705287_p40 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 33427 | 33669 |
| ARU14660.1 | KY705287_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9445 | 9543 |
| ARU14693.1 | KY705287_p48 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36376 | 36885 |
| ARU14664.1 | KY705287_p19 | baseplate component | phrog_372 | tail protein | tail | 1 | 20304 | 22322 |
| ARU14681.1 | KY705287_p36 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30087 | 30542 |
| ARU14651.1 | KY705287_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3786 | 4943 |
| ARU14656.1 | KY705287_p11 | tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7490 | 7912 |
| ARU14668.1 | KY705287_p23 | holin | phrog_297 | holin | lysis | 1 | 23233 | 23475 |
| ARU14680.1 | KY705287_p35 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 28743 | 30080 |
| ARU14682.1 | KY705287_p37 | primase | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 30545 | 31360 |
| ARU14676.1 | KY705287_p31 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 27030 | 27239 |
| ARU14667.1 | KY705287_p22 | hypothetical protein | phrog_1863 | unknown function | unknown function | 1 | 22919 | 23143 |
| ARU14683.1 | KY705287_p38 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 31347 | 32861 |
| ARU14669.1 | KY705287_p24 | lysin | phrog_998 | endolysin | lysis | 1 | 23477 | 24079 |
| ARU14647.1 | KY705287_p2 | hypothetical protein | phrog_3180 | Arc-like repressor | transcription regulation | -1 | 566 | 706 |
| ARU14649.1 | KY705287_p4 | TerL | phrog_9 | terminase large subunit | head and packaging | 1 | 1710 | 3584 |
| ARU14659.1 | KY705287_p14 | tail chaperone protein | phrog_1346 | tail protein | tail | 1 | 8999 | 9352 |
| ARU14675.1 | KY705287_p30 | hypothetical protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 26369 | 26899 |
| ARU14690.1 | KY705287_p45 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 34689 | 35396 |
| ARU14677.1 | KY705287_p32 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 27258 | 27380 |
| ARU14657.1 | KY705287_p12 | tail component | phrog_1217 | tail protein | tail | 1 | 7917 | 8288 |
| ARU14652.1 | KY705287_p7 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 4930 | 5595 |
| ARU14670.1 | KY705287_p25 | hypothetical protein | phrog_8818 | unknown function | unknown function | 1 | 24125 | 24262 |
| ARU14661.1 | KY705287_p16 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 9572 | 14380 |
| ARU14674.1 | KY705287_p29 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 25432 | 26376 |
| ARU14654.1 | KY705287_p9 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 6819 | 7133 |
| ARU14650.1 | KY705287_p5 | head-tail connector protein | phrog_1142 | unknown function | unknown function | 1 | 3589 | 3768 |
| ARU14692.1 | KY705287_p47 | late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 35866 | 36264 |
| ARU14666.1 | KY705287_p21 | hypothetical protein | phrog_1382 | unknown function | unknown function | 1 | 22750 | 22893 |
| ARU14671.1 | KY705287_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24303 | 24407 |
| ARU14673.1 | KY705287_p28 | Cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25178 | 25381 |
| ARU14689.1 | KY705287_p44 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 34384 | 34692 |
| ARU14648.1 | KY705287_p3 | hypothetical protein | phrog_559 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 821 | 1729 |
| ARU14672.1 | KY705287_p27 | lysin | phrog_4238 | endolysin | lysis | 1 | 24528 | 24755 |
| ARU14688.1 | KY705287_p43 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34002 | 34415 |
| ARU14662.1 | KY705287_p17 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 14377 | 15942 |
| ARU14655.1 | KY705287_p10 | head-tail connector protein | phrog_25 | head closure Hc1 | connector | 1 | 7133 | 7483 |
| ARU14646.1 | KY705287_p1 | TerS | phrog_83 | terminase small subunit | head and packaging | 1 | 87 | 548 |
| ARU14653.1 | KY705287_p8 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5611 | 6804 |