Genomic map of Salmonella phage 29485 (KY709687)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY709687
Definition
Salmonella phage 29485, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
51738
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
48.41
Number of singletons
4
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARB10842.1 KY709687_p13 hypothetical protein phrog_1258 unknown function unknown function -1 4795 5064
ARB10852.1 KY709687_p23 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 9382 9591
ARB10833.1 KY709687_p4 lysin phrog_7 endolysin lysis -1 1530 2033
ARB10915.1 KY709687_p86 hypothetical protein phrog_753 anti-termination protein Q-like transcription regulation -1 50611 51222
ARB10837.1 KY709687_p8 Nin protein phrog_1402 unknown function unknown function -1 3187 3366
ARB10870.1 KY709687_p41 EaA protein phrog_60 unknown function unknown function 1 18640 19764
ARB10897.1 KY709687_p68 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 38252 38689
ARB10839.1 KY709687_p10 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 3547 4116
ARB10893.1 KY709687_p64 hypothetical protein phrog_129 transcriptional regulator transcription regulation -1 35712 36242
ARB10860.1 KY709687_p31 hypothetical protein phrog_550 CIII anti-termination transcription regulation 1 13871 14041
ARB10838.1 KY709687_p9 NinH phrog_268 unknown function unknown function -1 3347 3550
ARB10914.1 KY709687_p85 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 49814 50332
ARB10866.1 KY709687_p37 hypothetical protein phrog_1578 unknown function unknown function 1 15829 16083
ARB10888.1 KY709687_p59 tail length tape-measure protein 1 phrog_1538 tail length tape measure protein tail -1 31711 33966
ARB10856.1 KY709687_p27 hypothetical protein phrog_3946 unknown function unknown function -1 11605 11808
ARB10885.1 KY709687_p56 hypothetical protein phrog_2735 unknown function unknown function -1 30600 30860
ARB10851.1 KY709687_p22 repressor phrog_191 CII-like transcriptional activator transcription regulation -1 8958 9248
ARB10857.1 KY709687_p28 antitermination protein N phrog_271 anti-termination protein N-like transcription regulation 1 12140 12523
ARB10902.1 KY709687_p73 hypothetical protein phrog_771 virion structural protein head and packaging -1 40075 41151
ARB10834.1 KY709687_p5 holin class II phrog_20 holin lysis -1 2005 2208
ARB10855.1 KY709687_p26 hypothetical protein phrog_2384 unknown function unknown function 1 10523 11566
ARB10830.1 KY709687_p1 hypothetical protein phrog_2657 transcriptional regulator transcription regulation -1 167 853
ARB10895.1 KY709687_p66 hypothetical protein phrog_853 major tail protein tail -1 37119 37853
ARB10877.1 KY709687_p48 minor tail protein phrog_1591 tail fiber protein tail -1 22793 24091
ARB10865.1 KY709687_p36 hypothetical protein phrog_1117 unknown function unknown function 1 15665 15832
ARB10864.1 KY709687_p35 hypothetical protein phrog_656 abc2 anti-RecBCD moron, auxiliary metabolic gene and host takeover 1 15361 15654
ARB10909.1 KY709687_p80 hypothetical protein phrog_875 unknown function unknown function -1 47396 47653
ARB10853.1 KY709687_p24 repressor phrog_4 transcriptional repressor transcription regulation 1 9701 10354
ARB10861.1 KY709687_p32 hypothetical protein phrog_17766 unknown function unknown function 1 14038 14220
ARB10846.1 KY709687_p17 NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism -1 5883 6320
ARB10880.1 KY709687_p51 tail assembly protein phrog_32 tail assembly protein tail -1 28250 28597
ARB10859.1 KY709687_p30 hypothetical protein phrog_3054 unknown function unknown function 1 13266 13631
ARB10905.1 KY709687_p76 hypothetical protein phrog_758 head morphogenesis head and packaging -1 42899 43825
ARB10900.1 KY709687_p71 hypothetical protein phrog_786 unknown function unknown function -1 39311 39712
ARB10916.1 KY709687_p87 hypothetical protein phrog_3496 unknown function unknown function -1 51380 51622
ARB10874.1 KY709687_p45 hypothetical protein phrog_28248 unknown function unknown function 1 20590 20964
ARB10854.1 KY709687_p25 hypothetical protein singleton unknown function unknown function 1 10338 10469
ARB10903.1 KY709687_p74 hypothetical protein phrog_766 head decoration head and packaging -1 41169 41618
ARB10873.1 KY709687_p44 hypothetical protein singleton unknown function unknown function 1 20478 20603
ARB10911.1 KY709687_p82 endopeptidase phrog_13 Rz-like spanin lysis -1 48357 48824
ARB10848.1 KY709687_p19 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 6595 7971
ARB10845.1 KY709687_p16 NinE phrog_288 unknown function unknown function -1 5570 5746
ARB10906.1 KY709687_p77 hypothetical protein phrog_146 portal protein head and packaging -1 43785 45134
ARB10850.1 KY709687_p21 hypothetical protein phrog_1331 unknown function unknown function -1 8776 8937
ARB10840.1 KY709687_p11 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4113 4508
ARB10867.1 KY709687_p38 EaD protein phrog_250 unknown function unknown function 1 16070 16936
ARB10883.1 KY709687_p54 minor tail protein phrog_18 minor tail protein tail -1 29439 30143
ARB10891.1 KY709687_p62 hypothetical protein phrog_3556 unknown function unknown function -1 34853 35230
ARB10871.1 KY709687_p42 hypothetical protein phrog_14783 unknown function unknown function 1 19764 19949
ARB10886.1 KY709687_p57 minor tail protein phrog_14 minor tail protein tail -1 30872 31219
ARB10884.1 KY709687_p55 hypothetical protein phrog_10490 unknown function unknown function 1 30308 30595
ARB10901.1 KY709687_p72 head completion protein phrog_5877 unknown function unknown function -1 39772 40065
ARB10887.1 KY709687_p58 hypothetical protein phrog_13469 unknown function unknown function 1 31312 31710
ARB10878.1 KY709687_p49 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 24102 25076
ARB10841.1 KY709687_p12 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism -1 4505 4795
ARB10836.1 KY709687_p7 antitermination protein Q phrog_943 anti-termination protein Q-like transcription regulation -1 2672 3190
ARB10868.1 KY709687_p39 hypothetical protein phrog_1258 unknown function unknown function 1 17193 17486
ARB10872.1 KY709687_p43 hypothetical protein phrog_2100 unknown function unknown function 1 20068 20346
ARB10862.1 KY709687_p33 DNA-binding protein phrog_1097 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 14323 15030
ARB10844.1 KY709687_p15 NinX phrog_444 unknown function unknown function -1 5226 5567
ARB10892.1 KY709687_p63 hypothetical protein phrog_4293 unknown function unknown function -1 35223 35597
ARB10832.1 KY709687_p3 outer membrane lytic protein phrog_13 Rz-like spanin lysis -1 1066 1533
ARB10912.1 KY709687_p83 lysozyme phrog_7 endolysin lysis -1 48821 49318
ARB10896.1 KY709687_p67 hypothetical protein phrog_782 unknown function unknown function -1 37869 38255
ARB10899.1 KY709687_p70 hypothetical protein phrog_1261 unknown function unknown function -1 39123 39311
ARB10858.1 KY709687_p29 superinfection exclusion protein phrog_1301 superinfection exclusion; inhibits SieB moron, auxiliary metabolic gene and host takeover -1 12544 13122
ARB10869.1 KY709687_p40 EaD protein phrog_60 unknown function unknown function 1 17483 18643
ARB10863.1 KY709687_p34 anti-RecBCD1 phrog_323 transcriptional regulator, D5-like transcription regulation 1 15030 15314
ARB10849.1 KY709687_p20 origin specific replication initiation factor phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism -1 7968 8789
ARB10835.1 KY709687_p6 hypothetical protein singleton unknown function unknown function 1 2453 2566
ARB10904.1 KY709687_p75 hypothetical protein phrog_760 unknown function unknown function -1 41631 42896
ARB10894.1 KY709687_p65 hypothetical protein phrog_791 unknown function unknown function -1 36426 37079
ARB10913.1 KY709687_p84 hypothetical protein phrog_1350 holin lysis -1 49318 49590
ARB10876.1 KY709687_p47 mobile element protein phrog_1 integrase integration and excision 1 21489 22340
ARB10831.1 KY709687_p2 hypothetical protein phrog_16173 unknown function unknown function -1 840 1031
ARB10847.1 KY709687_p18 hypothetical protein phrog_6308 unknown function unknown function -1 6301 6513
ARB10843.1 KY709687_p14 NinF phrog_672 unknown function unknown function -1 5057 5233
ARB10908.1 KY709687_p79 terminase small subunit phrog_51 terminase small subunit head and packaging -1 46570 47001
ARB10882.1 KY709687_p53 tail assembly protein phrog_30 minor tail protein tail -1 28720 29439
ARB10881.1 KY709687_p52 hypothetical protein phrog_3743 unknown function unknown function 1 28586 28750
ARB10898.1 KY709687_p69 hypothetical protein phrog_797 unknown function unknown function -1 38777 39139
ARB10910.1 KY709687_p81 hypothetical protein phrog_129 transcriptional regulator transcription regulation -1 47650 48147
ARB10890.1 KY709687_p61 hypothetical protein phrog_7441 unknown function unknown function -1 34417 34770
ARB10907.1 KY709687_p78 terminase large subunit phrog_2 terminase large subunit head and packaging -1 45267 46586
ARB10889.1 KY709687_p60 hypothetical protein singleton unknown function unknown function -1 34028 34315
ARB10879.1 KY709687_p50 tail fiber protein phrog_31 central tail fiber J tail -1 25070 28240
ARB10875.1 KY709687_p46 excisionase phrog_629 excisionase integration and excision 1 21074 21292