| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY742649 |
Definition |
Proteus phage VB_PmiS-Isfahan, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gorganvirus; Proteus virus Isfahan. |
DB of origin |
NUCCORE |
Length |
54836 |
Host Name |
Proteus mirabilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
36.09 |
Number of singletons |
33 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AQZ54583.1 | KY742649_p25 | major virion structural protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 15391 | 15786 |
| AQZ54596.1 | KY742649_p20 | hypothetical protein | phrog_1934 | unknown function | unknown function | -1 | 12053 | 12343 |
| AQZ54653.1 | KY742649_p85 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 51020 | 52111 |
| AQZ54621.1 | KY742649_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46163 | 46483 |
| AQZ54618.1 | KY742649_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44894 | 45136 |
| AQZ54609.1 | KY742649_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40991 | 41371 |
| AQZ54566.1 | KY742649_p37 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 21857 | 22030 |
| AQZ54646.1 | KY742649_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1849 | 2517 |
| AQZ54635.1 | KY742649_p42 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 25971 | 26468 |
| AQZ54640.1 | KY742649_p11 | hypothetical protein | phrog_444 | unknown function | unknown function | 1 | 6994 | 7266 |
| AQZ54626.1 | KY742649_p56 | hypothetical protein | phrog_19205 | unknown function | unknown function | -1 | 36147 | 36650 |
| AQZ54600.1 | KY742649_p31 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 18082 | 18447 |
| AQZ54570.1 | KY742649_p50 | hypothetical protein | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 33459 | 33935 |
| AQZ54613.1 | KY742649_p66 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 42038 | 42247 |
| AQZ54608.1 | KY742649_p61 | hypothetical protein | phrog_51 | terminase small subunit | head and packaging | 1 | 40270 | 40926 |
| AQZ54602.1 | KY742649_p29 | hypothetical protein | phrog_19242 | unknown function | unknown function | 1 | 17314 | 17604 |
| AQZ54584.1 | KY742649_p16 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 10613 | 11446 |
| AQZ54619.1 | KY742649_p73 | hypothetical protein | phrog_9917 | unknown function | unknown function | -1 | 45136 | 45381 |
| AQZ54631.1 | KY742649_p48 | hypothetical protein | phrog_198 | holin | lysis | 1 | 32810 | 33205 |
| AQZ54592.1 | KY742649_p14 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 9941 | 10123 |
| AQZ54591.1 | KY742649_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9597 | 9941 |
| AQZ54590.2 | KY742649_p82 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 49550 | 49975 |
| AQZ54593.1 | KY742649_p15 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10113 | 10634 |
| AQZ54620.1 | KY742649_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45385 | 46161 |
| AQZ54597.1 | KY742649_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12756 | 13364 |
| AQZ54655.1 | KY742649_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52429 | 52626 |
| AQZ54598.1 | KY742649_p33 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 18869 | 19273 |
| AQZ54636.1 | KY742649_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22560 | 22751 |
| AQZ54574.1 | KY742649_p79 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 47253 | 48620 |
| AQZ54569.1 | KY742649_p46 | tail tip protein | phrog_469 | tail protein | tail | 1 | 27898 | 30456 |
| AQZ54625.1 | KY742649_p57 | hypothetical protein | phrog_28641 | unknown function | unknown function | -1 | 36741 | 37016 |
| AQZ54581.1 | KY742649_p71 | large terminase subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 43165 | 44892 |
| AQZ54577.1 | KY742649_p47 | tailspike protein | singleton | unknown function | unknown function | -1 | 30468 | 32759 |
| AQZ54627.1 | KY742649_p54 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 35678 | 36013 |
| AQZ54588.1 | KY742649_p4 | helicase DEXDc superfamily protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 3217 | 4860 |
| AQZ54568.1 | KY742649_p41 | tail tape measure protein | phrog_1107 | tail length tape measure protein | tail | 1 | 22859 | 25978 |
| AQZ54641.1 | KY742649_p10 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 6774 | 6938 |
| AQZ54587.1 | KY742649_p5 | exonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4930 | 5436 |
| AQZ54622.1 | KY742649_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46480 | 46668 |
| AQZ54616.1 | KY742649_p69 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 42633 | 42896 |
| AQZ54639.1 | KY742649_p39 | hypothetical protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 22247 | 22570 |
| AQZ54589.1 | KY742649_p80 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 48680 | 49381 |
| AQZ54650.1 | KY742649_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49381 | 49515 |
| AQZ54586.1 | KY742649_p7 | ribonucleotide reductase large subunit | phrog_2638 | unknown function | unknown function | 1 | 5655 | 6008 |
| AQZ54611.1 | KY742649_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41550 | 41714 |
| AQZ54656.1 | KY742649_p88 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52633 | 52926 |
| AQZ54601.1 | KY742649_p30 | hypothetical protein | phrog_21889 | unknown function | unknown function | 1 | 17676 | 18119 |
| AQZ54599.1 | KY742649_p32 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 18444 | 18869 |
| AQZ54637.1 | KY742649_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22027 | 22227 |
| AQZ54571.1 | KY742649_p34 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 19273 | 20670 |
| AQZ54614.1 | KY742649_p67 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 42234 | 42434 |
| AQZ54634.1 | KY742649_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26468 | 27061 |
| AQZ54610.1 | KY742649_p63 | hypothetical protein | phrog_13367 | unknown function | unknown function | -1 | 41368 | 41556 |
| ARS25030.1 | KY742649_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53011 | 53157 |
| AQZ54657.2 | KY742649_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53280 | 53552 |
| AQZ54645.1 | KY742649_p3 | hypothetical protein | phrog_18211 | unknown function | unknown function | -1 | 2563 | 2859 |
| AQZ54642.1 | KY742649_p9 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6269 | 6784 |
| AQZ54615.1 | KY742649_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42406 | 42636 |
| AQZ54578.1 | KY742649_p53 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 34492 | 35691 |
| AQZ54651.1 | KY742649_p83 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 50087 | 50761 |
| AQZ54585.1 | KY742649_p12 | P4 family primase | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 7270 | 9597 |
| AQZ54603.1 | KY742649_p23 | hypothetical protein | phrog_1530 | DNA methyltransferase | other | 1 | 14026 | 14430 |
| AQZ54576.1 | KY742649_p35 | hypothetical protein | phrog_3007 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 20712 | 21209 |
| AQZ54580.1 | KY742649_p58 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37013 | 38833 |
| AQZ54623.1 | KY742649_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46753 | 46911 |
| AQZ54629.1 | KY742649_p51 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | 1 | 33937 | 34230 |
| AQZ54582.1 | KY742649_p26 | major capsid protein | phrog_1005 | major head protein | head and packaging | 1 | 15786 | 16805 |
| AQZ54579.1 | KY742649_p55 | RecT family recombinase | singleton | unknown function | unknown function | -1 | 36010 | 36150 |
| AQZ54654.1 | KY742649_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52145 | 52432 |
| AQZ54628.1 | KY742649_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34317 | 34520 |
| ARS25029.1 | KY742649_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39906 | 40052 |
| AQZ54644.1 | KY742649_p6 | hypothetical protein | phrog_343 | unknown function | unknown function | 1 | 5438 | 5668 |
| ARS25026.1 | KY742649_p17 | hypothetical protein | phrog_7990 | unknown function | unknown function | -1 | 11468 | 11662 |
| AQZ54647.1 | KY742649_p1 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 767 | 1846 |
| AQZ54595.1 | KY742649_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11666 | 11803 |
| AQZ54624.1 | KY742649_p78 | hypothetical protein | phrog_10996 | unknown function | unknown function | -1 | 46911 | 47114 |
| AQZ54606.1 | KY742649_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17025 | 17183 |
| AQZ54633.1 | KY742649_p44 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 27058 | 27552 |
| AQZ54652.1 | KY742649_p84 | hypothetical protein | phrog_11960 | unknown function | unknown function | 1 | 50758 | 50976 |
| ARS25028.1 | KY742649_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38903 | 39136 |
| AQZ54632.1 | KY742649_p45 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 27549 | 27920 |
| AQZ54575.1 | KY742649_p91 | prohead assembly protein | phrog_2468 | head morphogenesis | head and packaging | 1 | 53540 | 54475 |
| AQZ54572.1 | KY742649_p21 | swarming motility protein | phrog_1017 | unknown function | unknown function | -1 | 12340 | 12759 |
| AQZ54612.1 | KY742649_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41715 | 42044 |
| AQZ54604.1 | KY742649_p24 | hypothetical protein | phrog_19463 | unknown function | unknown function | 1 | 14432 | 15391 |
| ARS25027.1 | KY742649_p19 | portal protein | phrog_1258 | unknown function | unknown function | -1 | 11800 | 12066 |
| AQZ54605.1 | KY742649_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16843 | 17022 |
| AQZ54567.1 | KY742649_p36 | tail assembly chaperone | phrog_313 | Tail assembly chaperone | tail | 1 | 21354 | 21776 |
| AQZ54643.1 | KY742649_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6081 | 6296 |
| AQZ54617.1 | KY742649_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42920 | 43039 |
| AQZ54630.1 | KY742649_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33202 | 33462 |