Genomic map of Proteus phage VB_PmiS-Isfahan (KY742649)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY742649
Definition
Proteus phage VB_PmiS-Isfahan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gorganvirus; Proteus virus Isfahan.
DB of origin
NUCCORE
Length
54836
Host Name
Proteus mirabilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
36.09
Number of singletons
33
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AQZ54583.1 KY742649_p25 major virion structural protein phrog_673 head scaffolding protein head and packaging 1 15391 15786
AQZ54596.1 KY742649_p20 hypothetical protein phrog_1934 unknown function unknown function -1 12053 12343
AQZ54653.1 KY742649_p85 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 51020 52111
AQZ54621.1 KY742649_p75 hypothetical protein singleton unknown function unknown function -1 46163 46483
AQZ54618.1 KY742649_p72 hypothetical protein singleton unknown function unknown function -1 44894 45136
AQZ54609.1 KY742649_p62 hypothetical protein singleton unknown function unknown function -1 40991 41371
AQZ54566.1 KY742649_p37 tail assembly chaperone singleton unknown function unknown function 1 21857 22030
AQZ54646.1 KY742649_p2 hypothetical protein singleton unknown function unknown function -1 1849 2517
AQZ54635.1 KY742649_p42 hypothetical protein phrog_384 virion structural protein head and packaging 1 25971 26468
AQZ54640.1 KY742649_p11 hypothetical protein phrog_444 unknown function unknown function 1 6994 7266
AQZ54626.1 KY742649_p56 hypothetical protein phrog_19205 unknown function unknown function -1 36147 36650
AQZ54600.1 KY742649_p31 hypothetical protein phrog_161 head closure Hc1 connector 1 18082 18447
AQZ54570.1 KY742649_p50 hypothetical protein phrog_1259 baseplate hub subunit and tail lysozyme tail 1 33459 33935
AQZ54613.1 KY742649_p66 hypothetical protein phrog_1972 unknown function unknown function -1 42038 42247
AQZ54608.1 KY742649_p61 hypothetical protein phrog_51 terminase small subunit head and packaging 1 40270 40926
AQZ54602.1 KY742649_p29 hypothetical protein phrog_19242 unknown function unknown function 1 17314 17604
AQZ54584.1 KY742649_p16 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 10613 11446
AQZ54619.1 KY742649_p73 hypothetical protein phrog_9917 unknown function unknown function -1 45136 45381
AQZ54631.1 KY742649_p48 hypothetical protein phrog_198 holin lysis 1 32810 33205
AQZ54592.1 KY742649_p14 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 9941 10123
AQZ54591.1 KY742649_p13 hypothetical protein singleton unknown function unknown function 1 9597 9941
AQZ54590.2 KY742649_p82 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 49550 49975
AQZ54593.1 KY742649_p15 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 10113 10634
AQZ54620.1 KY742649_p74 hypothetical protein singleton unknown function unknown function -1 45385 46161
AQZ54597.1 KY742649_p22 hypothetical protein singleton unknown function unknown function -1 12756 13364
AQZ54655.1 KY742649_p87 hypothetical protein singleton unknown function unknown function -1 52429 52626
AQZ54598.1 KY742649_p33 hypothetical protein phrog_179 tail terminator connector 1 18869 19273
AQZ54636.1 KY742649_p40 hypothetical protein singleton unknown function unknown function -1 22560 22751
AQZ54574.1 KY742649_p79 portal protein phrog_113 portal protein head and packaging 1 47253 48620
AQZ54569.1 KY742649_p46 tail tip protein phrog_469 tail protein tail 1 27898 30456
AQZ54625.1 KY742649_p57 hypothetical protein phrog_28641 unknown function unknown function -1 36741 37016
AQZ54581.1 KY742649_p71 large terminase subunit phrog_2 terminase large subunit head and packaging 1 43165 44892
AQZ54577.1 KY742649_p47 tailspike protein singleton unknown function unknown function -1 30468 32759
AQZ54627.1 KY742649_p54 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 35678 36013
AQZ54588.1 KY742649_p4 helicase DEXDc superfamily protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 3217 4860
AQZ54568.1 KY742649_p41 tail tape measure protein phrog_1107 tail length tape measure protein tail 1 22859 25978
AQZ54641.1 KY742649_p10 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 6774 6938
AQZ54587.1 KY742649_p5 exonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 4930 5436
AQZ54622.1 KY742649_p76 hypothetical protein singleton unknown function unknown function -1 46480 46668
AQZ54616.1 KY742649_p69 hypothetical protein phrog_2993 unknown function unknown function -1 42633 42896
AQZ54639.1 KY742649_p39 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 22247 22570
AQZ54589.1 KY742649_p80 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 48680 49381
AQZ54650.1 KY742649_p81 hypothetical protein singleton unknown function unknown function -1 49381 49515
AQZ54586.1 KY742649_p7 ribonucleotide reductase large subunit phrog_2638 unknown function unknown function 1 5655 6008
AQZ54611.1 KY742649_p64 hypothetical protein singleton unknown function unknown function -1 41550 41714
AQZ54656.1 KY742649_p88 hypothetical protein singleton unknown function unknown function -1 52633 52926
AQZ54601.1 KY742649_p30 hypothetical protein phrog_21889 unknown function unknown function 1 17676 18119
AQZ54599.1 KY742649_p32 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 18444 18869
AQZ54637.1 KY742649_p38 hypothetical protein singleton unknown function unknown function -1 22027 22227
AQZ54571.1 KY742649_p34 major tail protein phrog_290 minor tail protein tail 1 19273 20670
AQZ54614.1 KY742649_p67 hypothetical protein phrog_1972 unknown function unknown function -1 42234 42434
AQZ54634.1 KY742649_p43 hypothetical protein singleton unknown function unknown function 1 26468 27061
AQZ54610.1 KY742649_p63 hypothetical protein phrog_13367 unknown function unknown function -1 41368 41556
ARS25030.1 KY742649_p89 hypothetical protein singleton unknown function unknown function -1 53011 53157
AQZ54657.2 KY742649_p90 hypothetical protein singleton unknown function unknown function -1 53280 53552
AQZ54645.1 KY742649_p3 hypothetical protein phrog_18211 unknown function unknown function -1 2563 2859
AQZ54642.1 KY742649_p9 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 6269 6784
AQZ54615.1 KY742649_p68 hypothetical protein singleton unknown function unknown function -1 42406 42636
AQZ54578.1 KY742649_p53 DNA methylase phrog_67 DNA methyltransferase other -1 34492 35691
AQZ54651.1 KY742649_p83 hypothetical protein phrog_474 phosphofructokinase other 1 50087 50761
AQZ54585.1 KY742649_p12 P4 family primase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 7270 9597
AQZ54603.1 KY742649_p23 hypothetical protein phrog_1530 DNA methyltransferase other 1 14026 14430
AQZ54576.1 KY742649_p35 hypothetical protein phrog_3007 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 20712 21209
AQZ54580.1 KY742649_p58 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 37013 38833
AQZ54623.1 KY742649_p77 hypothetical protein singleton unknown function unknown function -1 46753 46911
AQZ54629.1 KY742649_p51 hypothetical protein phrog_1152 Rz-like spanin lysis 1 33937 34230
AQZ54582.1 KY742649_p26 major capsid protein phrog_1005 major head protein head and packaging 1 15786 16805
AQZ54579.1 KY742649_p55 RecT family recombinase singleton unknown function unknown function -1 36010 36150
AQZ54654.1 KY742649_p86 hypothetical protein singleton unknown function unknown function -1 52145 52432
AQZ54628.1 KY742649_p52 hypothetical protein singleton unknown function unknown function -1 34317 34520
ARS25029.1 KY742649_p60 hypothetical protein singleton unknown function unknown function 1 39906 40052
AQZ54644.1 KY742649_p6 hypothetical protein phrog_343 unknown function unknown function 1 5438 5668
ARS25026.1 KY742649_p17 hypothetical protein phrog_7990 unknown function unknown function -1 11468 11662
AQZ54647.1 KY742649_p1 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 767 1846
AQZ54595.1 KY742649_p18 hypothetical protein singleton unknown function unknown function -1 11666 11803
AQZ54624.1 KY742649_p78 hypothetical protein phrog_10996 unknown function unknown function -1 46911 47114
AQZ54606.1 KY742649_p28 hypothetical protein singleton unknown function unknown function -1 17025 17183
AQZ54633.1 KY742649_p44 hypothetical protein phrog_396 minor tail protein tail 1 27058 27552
AQZ54652.1 KY742649_p84 hypothetical protein phrog_11960 unknown function unknown function 1 50758 50976
ARS25028.1 KY742649_p59 hypothetical protein singleton unknown function unknown function -1 38903 39136
AQZ54632.1 KY742649_p45 hypothetical protein phrog_329 minor tail protein tail 1 27549 27920
AQZ54575.1 KY742649_p91 prohead assembly protein phrog_2468 head morphogenesis head and packaging 1 53540 54475
AQZ54572.1 KY742649_p21 swarming motility protein phrog_1017 unknown function unknown function -1 12340 12759
AQZ54612.1 KY742649_p65 hypothetical protein singleton unknown function unknown function -1 41715 42044
AQZ54604.1 KY742649_p24 hypothetical protein phrog_19463 unknown function unknown function 1 14432 15391
ARS25027.1 KY742649_p19 portal protein phrog_1258 unknown function unknown function -1 11800 12066
AQZ54605.1 KY742649_p27 hypothetical protein singleton unknown function unknown function -1 16843 17022
AQZ54567.1 KY742649_p36 tail assembly chaperone phrog_313 Tail assembly chaperone tail 1 21354 21776
AQZ54643.1 KY742649_p8 hypothetical protein singleton unknown function unknown function 1 6081 6296
AQZ54617.1 KY742649_p70 hypothetical protein singleton unknown function unknown function -1 42920 43039
AQZ54630.1 KY742649_p49 hypothetical protein singleton unknown function unknown function 1 33202 33462