Genomic map of Pseudomonas virus KNP (KY798121)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY798121
Definition
Pseudomonas virus KNP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Ghunavirus.
DB of origin
NUCCORE
Length
40491
Host Name
Pseudomonas fluorescens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
57.29
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARM69636.1 KY798121_p23 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 12913 14604
ARM69644.1 KY798121_p31 hypothetical protein phrog_1391 unknown function unknown function 1 19408 19680
ARM69658.1 KY798121_p45 holin phrog_920 holin lysis 1 37063 37278
ARM69640.1 KY798121_p27 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 17568 17951
ARM69621.1 KY798121_p8 hypothetical protein phrog_9238 unknown function unknown function 1 3664 4104
ARM69646.1 KY798121_p33 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 20092 20394
ARM69653.1 KY798121_p40 internal virion protein B phrog_805 internal virion protein head and packaging 1 27718 28299
ARM69638.1 KY798121_p25 hypothetical protein phrog_9312 unknown function unknown function 1 14890 15399
ARM69616.1 KY798121_p3 hypothetical protein phrog_30554 unknown function unknown function 1 1382 1624
ARM69662.1 KY798121_p49 DNA packaging protein large subunit phrog_38 terminase large subunit head and packaging 1 37981 39729
ARM69633.1 KY798121_p20 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 11431 11874
ARM69647.1 KY798121_p34 head-to-tail connector protein phrog_449 head-tail adaptor connector 1 20409 22040
ARM69655.1 KY798121_p42 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 30528 34706
ARM69657.1 KY798121_p44 hypothetical protein phrog_1795 tail fiber protein tail 1 36704 37063
ARM69652.1 KY798121_p39 internal virion protein A phrog_308 internal virion protein head and packaging 1 27273 27707
ARM69625.1 KY798121_p12 hypothetical protein phrog_12775 unknown function unknown function 1 7309 7695
ARM69645.1 KY798121_p32 hypothetical protein phrog_3986 unknown function unknown function 1 19677 20120
ARM69656.1 KY798121_p43 tail fiber protein phrog_4242 tail fiber protein tail 1 34769 36664
ARM69631.1 KY798121_p18 hypothetical protein phrog_5138 unknown function unknown function 1 10308 10676
ARM69659.1 KY798121_p46 DNA packaging protein small subunit phrog_1351 terminase small subunit head and packaging 1 37275 37532
ARM69622.1 KY798121_p9 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 4232 6889
ARM69623.1 KY798121_p10 hypothetical protein phrog_13030 RNA polymerase DNA, RNA and nucleotide metabolism 1 6903 7040
ARM69634.1 KY798121_p21 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 11877 12317
ARM69626.1 KY798121_p13 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 7707 8771
ARM69660.1 KY798121_p47 Rz-like endopeptidase phrog_1327 Rz-like spanin lysis 1 37532 37981
ARM69661.1 KY798121_p48 Rz1-like protein phrog_4306 Rz-like spanin lysis 1 37683 37937
ARM69614.1 KY798121_p1 hypothetical protein phrog_16407 unknown function unknown function 1 938 1192
ARM69641.1 KY798121_p28 hypothetical protein phrog_1334 unknown function unknown function 1 17944 18153
ARM69632.1 KY798121_p19 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10730 11431
ARM69642.1 KY798121_p29 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 18150 19094
ARM69617.1 KY798121_p4 hypothetical protein phrog_7806 unknown function unknown function 1 1712 2191
ARM69629.1 KY798121_p16 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 9500 10147
ARM69639.1 KY798121_p26 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 15410 17557
ARM69615.1 KY798121_p2 hypothetical protein phrog_7884 unknown function unknown function 1 1192 1389
ARM69649.1 KY798121_p36 major capsid protein phrog_267 major head protein head and packaging 1 23084 24127
ARM69663.1 KY798121_p50 hypothetical protein phrog_2193 unknown function unknown function 1 39908 40081
ARM69619.1 KY798121_p6 hypothetical protein phrog_61 2OG-Fe(II) oxygenase moron, auxiliary metabolic gene and host takeover 1 2755 3459
ARM69627.1 KY798121_p14 hypothetical protein phrog_21934 unknown function unknown function 1 8775 9053
ARM69650.1 KY798121_p37 tail tubular protein A phrog_446 tail protein tail 1 24191 24778
ARM69618.1 KY798121_p5 hypothetical protein phrog_8679 unknown function unknown function 1 2222 2758
ARM69628.1 KY798121_p15 hypothetical protein phrog_1777 unknown function unknown function 1 9246 9503
ARM69637.1 KY798121_p24 hypothetical protein phrog_9727 unknown function unknown function 1 14623 14826
ARM69643.1 KY798121_p30 hypothetical protein phrog_1447 unknown function unknown function 1 19163 19405
ARM69635.1 KY798121_p22 nucleotidyl transferase phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 12387 12926
ARM69624.1 KY798121_p11 hypothetical protein phrog_11287 unknown function unknown function 1 7037 7309
ARM69651.1 KY798121_p38 tail tubular protein B phrog_457 tail protein tail 1 24788 27214
ARM69654.1 KY798121_p41 internal virion protein C phrog_1339 internal virion protein head and packaging 1 28299 30515
ARM69630.1 KY798121_p17 host RNA-polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 10144 10311
ARM69620.1 KY798121_p7 hypothetical protein phrog_19243 unknown function unknown function 1 3459 3662
ARM69648.1 KY798121_p35 scaffolding protein phrog_1052 head assembly head and packaging 1 22109 22984